Experiment set2IT063 for Escherichia coli BW25113

Compare to:

LB with Spectinomycin dihydrochloride pentahydrate 0.0125 mg/ml

Genes with specific phenotypes:

  gene name fitness t score description  
b1413 hrpA -3.9 -8.1 ATP-dependent helicase (RefSeq) conserved
b2938 speA -3.8 -8.4 arginine decarboxylase (NCBI) conserved
b3934 cytR -3.0 -9.2 DNA-binding transcriptional dual regulator (NCBI) compare
b4381 deoC -2.9 -5.4 deoxyribose-phosphate aldolase (NCBI) compare
b2392 mntH -2.8 -7.0 manganese transport protein MntH (NCBI) compare
b0008 talB -2.7 -9.4 transaldolase B (NCBI) compare
b3416 malQ -2.5 -9.7 4-alpha-glucanotransferase (amylomaltase) (NCBI) compare
b2037 rfbX -2.1 -10.9 predicted polisoprenol-linked O-antigen transporter (NCBI) compare
b2796 sdaC -1.8 -10.3 predicted serine transporter (NCBI) compare
b4383 deoB -1.6 -6.7 phosphopentomutase (NCBI) compare
b3289 rsmB -1.6 -8.3 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) conserved
b3662 nepI -1.6 -7.7 predicted transporter (RefSeq) compare
b4159 yjeP -1.6 -11.4 predicted mechanosensitive channel (NCBI) compare
b4180 rlmB -1.5 -5.6 23S rRNA (Gm2251)-methyltransferase (NCBI) conserved
b4384 deoD -1.2 -5.5 purine nucleoside phosphorylase (NCBI) compare
b0960 b0960 -1.1 -6.1 orf, hypothetical protein (VIMSS) compare
b4235 pmbA -1.0 -5.7 predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) compare
b3244 tldD -1.0 -6.2 predicted peptidase (NCBI) compare
b3825 pldB -1.0 -6.5 lysophospholipase L(2) (NCBI) compare
b0686 ybfF +1.1 6.0 hypothetical protein (NCBI) compare
b1329 b1329 +1.1 7.7 putative transport periplasmic protein (VIMSS) compare
b3417 malP +1.4 7.0 maltodextrin phosphorylase (NCBI) compare
b3780 rhlB +1.4 10.7 ATP-dependent RNA helicase (NCBI) compare
b3197 kdsD +1.5 5.5 D-arabinose 5-phosphate isomerase (NCBI) compare
b2502 ppx +1.6 9.4 exopolyphosphatase (NCBI) compare
b3891 fdhE +1.8 12.3 formate dehydrogenase accessory protein FdhE (NCBI) compare
b0427 yajR +1.9 13.5 putative transport protein (VIMSS) compare
b3893 fdoH +1.9 14.4 formate dehydrogenase-O, Fe-S subunit (NCBI) compare
b2964 nupG +2.1 15.3 transport of nucleosides, permease protein (VIMSS) compare
b2113 mrp +2.2 10.1 putative ATPase (VIMSS) compare
b0826 moeB +2.2 9.9 molybdopterin biosynthesis protein MoeB (NCBI) compare
b3590 selB +2.2 17.4 selenocysteinyl-tRNA-specific translation factor (NCBI) compare
b3892 fdoI +2.2 15.7 formate dehydrogenase-O, cytochrome b556 subunit (NCBI) compare
b3591 selA +2.2 18.8 selenocysteine synthase (NCBI) compare
b3895 fdhD +2.2 15.2 formate dehydrogenase accessory protein (NCBI) compare
b1253 yciA +2.3 7.0 predicted hydrolase (NCBI) compare
b3894 fdoG +2.3 19.9 formate dehydrogenase-O, large subunit (NCBI) compare
b1764 selD +2.4 9.7 selenophosphate synthetase (NCBI) compare
b2393 nupC +3.2 15.2 nucleoside (except guanosine) transporter (NCBI) compare
b3260 dusB +3.3 5.4 tRNA-dihydrouridine synthase B (NCBI) compare
b0842 cmr +7.9 59.5 multidrug efflux system protein (NCBI) compare


Specific phenotypes for stress Spectinomycin dihydrochloride pentahydrate across organisms