Experiment set2IT063 for Agrobacterium fabrum C58

Compare to:

D-Glucuronic acid gamma lactone carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4896 +1.9 4.9 acetyltransferase compare
Atu3001 +1.7 5.0 hypothetical protein compare
Atu3011 +1.5 4.2 ArsR family transcriptional regulator compare
Atu0941 +1.4 1.9 hypothetical protein compare
Atu4893 +1.3 4.8 hypothetical protein compare
Atu4890 +1.1 2.7 IS426 transposase compare
Atu3014 +1.1 2.7 hypothetical protein compare
Atu4166 +1.1 4.2 UDP-glucose 4-epimerase compare
Atu3013 +1.0 4.5 hypothetical protein compare
Atu4897 +1.0 2.0 hypothetical protein compare
Atu4894 +1.0 6.3 transposase compare
Atu1225 +0.9 1.6 hypothetical protein compare
Atu8054 +0.9 0.9 hypothetical protein compare
Atu5501 +0.9 2.5 hypothetical protein compare
Atu0477 +0.9 2.0 hypothetical protein compare
Atu4884 +0.9 3.6 hypothetical protein compare
Atu0809 +0.8 2.1 hypothetical protein compare
Atu2183 +0.8 5.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4892 +0.8 6.1 hypothetical protein compare
Atu2585 +0.8 4.3 hypothetical protein compare
Atu6131 +0.8 3.1 TraR Antiactivator compare
Atu5164 +0.8 1.0 type IV secretion protein AvhB3 compare
Atu3031 +0.8 1.7 hypothetical protein compare
Atu0886 +0.8 1.8 hypothetical protein compare
Atu3019 +0.8 5.2 hypothetical protein compare
Atu8052 +0.8 1.6 hypothetical protein compare
Atu0755 +0.8 3.3 hypothetical protein compare
Atu4887 +0.8 3.8 hypothetical protein compare
Atu3016 +0.7 2.6 phosphoglyceromutase compare
Atu3022 +0.7 5.1 sugar ABC transporter permease compare
Atu4875 +0.7 3.2 hypothetical protein compare
Atu3353 +0.7 5.7 mannose-1-phosphate guanylyltransferase compare
Atu5487 +0.7 3.0 hypothetical protein compare
Atu0026 +0.7 1.1 hypothetical protein compare
Atu3023 +0.7 4.4 sugar ABC transporter permease compare
Atu3010 +0.7 4.6 hypothetical protein compare
Atu4881 +0.7 4.5 hypothetical protein compare
Atu5489 +0.7 1.3 hypothetical protein compare
Atu3021 +0.7 4.0 sugar ABC transporter ATPase compare
Atu2582 +0.7 3.9 UDP-glucose/GDP-mannose dehydrogenase compare
Atu8082 +0.7 2.3 hypothetical protein compare
Atu2583 +0.7 5.1 glycosyltransferase compare
Atu3017 +0.7 1.1 phosphoglyceromutase compare
Atu8093 +0.7 2.6 hypothetical protein compare
Atu2193 +0.7 1.1 hypothetical protein compare
Atu6138 +0.7 2.9 Repressor of the acc and arc operons compare
Atu4888 +0.7 2.9 hypothetical protein compare
Atu0184 +0.7 2.2 glucokinase compare
Atu8202 +0.7 2.6 hypothetical protein compare
Atu3006 +0.7 2.9 hypothetical protein compare
Atu2450 +0.7 1.9 hypothetical protein compare
Atu4889 +0.7 3.5 hypothetical protein compare
Atu8055 +0.6 2.6 hypothetical protein compare
Atu4864 +0.6 3.2 MarR family transcriptional regulator compare
Atu1968 +0.6 1.7 hypothetical protein compare
Atu0922 +0.6 2.6 hypothetical protein compare
Atu3311 +0.6 5.3 phosphomannose isomerase compare
Atu4879 +0.6 3.6 hypothetical protein compare
Atu1629 +0.6 1.3 transcriptional regulator, ArsR family compare
Atu3009 +0.6 0.9 exopolysaccharide production protein compare
Atu3963 +0.6 3.1 GntR family transcriptional regulator compare
Atu3015 +0.6 2.8 hypothetical protein compare
Atu3018 +0.6 2.9 hypothetical protein compare
Atu3012 +0.6 1.1 hypothetical protein compare
Atu3027 +0.6 4.2 dehydrogenase compare
Atu3025 +0.6 4.9 oligo alginate lyase compare
Atu0427 +0.6 3.0 hypothetical protein compare
Atu4613 +0.6 4.5 glycosyltransferase compare
Atu2378 +0.6 2.4 hypothetical protein compare
Atu1565 +0.6 2.5 serine acetyltransferase compare
Atu3026 +0.6 3.6 short chain dehydrogenase compare
Atu0580 +0.6 2.6 flagellar biosynthetic protein compare
Atu8144 +0.6 2.5 hypothetical protein compare
Atu3024 +0.6 3.9 sugar ABC transporter permease compare
Atu4617 +0.6 4.3 dTDP-D-glucose-4,6-dehydratase compare
Atu3029 +0.6 4.1 glucarate dehydratase compare
Atu2590 +0.5 3.6 hypothetical protein compare
Atu4614 +0.5 3.6 glycosyltransferase compare
Atu0135 +0.5 1.2 uracil phosphoribosyltransferase compare
Atu0559 +0.5 2.9 hypothetical protein compare
Atu4882 +0.5 0.9 hypothetical protein compare
Atu2577 +0.5 4.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu1333 +0.5 2.4 outer membrane protein compare
Atu1038 +0.5 1.4 two component response regulator compare
Atu4609 +0.5 4.2 glycosyltransferase compare
Atu3044 +0.5 1.8 asparaginase compare
Atu3030 +0.5 3.1 hypothetical protein compare
Atu1344 +0.5 1.2 hypothetical protein compare
Atu1566 +0.5 0.8 hypothetical protein compare
Atu0450 +0.5 3.7 transcription antitermination protein compare
Atu4880 +0.5 3.5 AraC family transcriptional regulator compare
Atu8161 +0.5 1.2 hypothetical protein compare
Atu2584 +0.5 1.8 hypothetical protein compare
Atu3647 +0.5 1.3 hypothetical protein compare
Atu0564 +0.5 3.2 flagellar biosynthetic protein compare
Atu3461 +0.5 1.1 GntR family transcriptional regulator compare
Atu4615 +0.5 3.9 glucose-1-phosphate thymidylyltransferase compare
Atu4610 +0.5 3.3 sugar nucleotide epimerase/dehydratase compare
Atu3028 +0.5 3.2 hypothetical protein compare
Atu0549 +0.5 2.7 hypothetical protein compare
Atu0070 +0.5 3.1 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu2379 +0.5 3.3 phosphomannomutase compare
Atu0777 +0.5 0.7 hypothetical protein compare
Atu4876 +0.5 3.3 oxidoreductase compare
Atu1837 +0.5 3.0 transcriptional regulator compare
Atu2439 +0.5 0.7 hypothetical protein compare
Atu0523 +0.5 3.5 flagellar M-ring protein compare
Atu4608 +0.5 3.6 hypothetical protein compare
Atu1327 +0.5 1.6 NADH-ubiquinone oxidoreductase compare
Atu3608 +0.5 2.7 hypothetical protein compare
Atu3095 +0.5 1.9 hypothetical protein compare
Atu1535 +0.5 1.6 cytochrome c oxidase, FixQ chain compare
Atu4618 +0.5 3.6 dTDP-rhamnose-3,5-epimerase compare
Atu4028 +0.5 1.7 recombination regulator RecX compare
Atu0594 +0.5 3.4 alpha-glucosidase compare
Atu0557 +0.4 3.2 flagellum-specific ATP synthase compare
Atu1057 +0.4 1.9 ADP-Ribose Pyrophosphatase compare
Atu2464 +0.4 1.7 formyltetrahydrofolate deformylase compare
Atu4643 +0.4 2.1 hypothetical protein compare
Atu1559 +0.4 1.7 hypothetical protein compare
Atu0555 +0.4 3.0 flagellar basal-body rod protein FlgB compare
Atu5468 +0.4 1.3 hypothetical protein compare
Atu3644 +0.4 1.8 hypothetical protein compare
Atu4345 +0.4 2.1 hypothetical protein compare
Atu0907 +0.4 1.3 Phosphinothricin acetyltransferase compare
Atu1147 +0.4 2.9 hypothetical protein compare
Atu4877 +0.4 3.4 short-chain dehydrogenase compare
Atu6165 +0.4 0.6 hypothetical protein compare
Atu5462 +0.4 1.5 ABC transporter nucleotide binding/ATPase compare
Atu4133 +0.4 1.1 hypothetical protein compare
Atu2591 +0.4 2.7 glucosyltransferase compare
Atu3032 +0.4 1.2 hypothetical protein compare
Atu2074 +0.4 2.0 hypothetical protein compare
Atu4862 +0.4 3.6 IS21 family transposase compare
Atu0824 +0.4 0.7 hypothetical protein compare
Atu5455 +0.4 1.6 hypothetical protein compare
Atu1972 +0.4 2.5 hypothetical protein compare
Atu3657 +0.4 1.8 hypothetical protein compare
Atu4859 +0.4 3.0 hypothetical protein compare
Atu1838 +0.4 1.8 ABC transporter, substrate binding protein (amino acid) compare
Atu0566 +0.4 1.0 hypothetical protein compare
Atu1637 +0.4 1.3 hypothetical protein compare
Atu2729 +0.4 1.1 hypothetical protein compare
Atu6113 +0.4 1.8 conserved hypothetical protein compare
Atu4872 +0.4 3.1 LysR family transcriptional regulator compare
Atu1830 +0.4 2.6 bacterioferritin comigratory protein compare
Atu8132 +0.4 2.1 hypothetical protein compare
Atu3037 +0.4 2.4 dipeptide ABC transporter permease compare
Atu0582 +0.4 3.1 flagellar biosynthetic protein FLIR compare
Atu4878 +0.4 2.0 hypothetical protein compare
Atu1213 +0.4 1.1 hypothetical protein compare
Atu0225 +0.4 0.6 hypothetical protein compare
Atu0152 +0.4 0.9 hypothetical protein compare
Atu4870 +0.4 2.9 NADP-dependent quinone oxidoreductase compare
Atu4245 +0.4 1.7 polyamine ABC transporter permease compare
Atu1896 +0.4 1.6 hypothetical protein compare
Atu2354 +0.4 1.1 transcriptional regulator, MarR family compare
Atu0558 +0.4 2.2 flagellar basal body rod protein compare
Atu3035 +0.4 3.1 two component response regulator compare
Atu3655 +0.4 2.7 antioxidant protein compare
Atu4458 +0.4 1.2 hypothetical protein compare
Atu4868 +0.4 2.7 oxidoreductase compare
Atu2156 +0.4 2.0 hypothetical protein compare
Atu0570 +0.4 2.7 Chemotaxis protein compare
Atu4867 +0.4 2.2 hypothetical protein compare
Atu0581 +0.4 2.9 flagellar biosynthesis protein compare
Atu3334 +0.4 1.8 hypothetical protein compare
Atu3654 +0.4 2.1 hypothetical protein compare
Atu1970 +0.4 0.9 hypothetical protein compare
Atu1587 +0.3 2.1 hypothetical protein compare
Atu4589 +0.3 1.3 transmembrane transport protein compare
Atu4369 +0.3 2.0 sugar ABC transporter substrate-binding protein compare
Atu3251 +0.3 1.9 haloacid dehalogenase compare
Atu4043 +0.3 2.6 hypothetical protein compare
Atu3646 +0.3 2.8 hypothetical protein compare
Atu5540 +0.3 0.5 hypothetical protein compare
Atu2349 +0.3 1.0 hypothetical protein compare
Atu5102 +0.3 2.0 hypothetical protein compare
Atu3033 +0.3 1.7 hypothetical protein compare
Atu1026 +0.3 0.9 hypothetical protein compare
Atu3615 +0.3 2.1 hypothetical protein compare
Atu0548 +0.3 2.5 flagellar L-ring protein precursor compare
Atu0997 +0.3 1.9 hypothetical protein compare
Atu0797 +0.3 2.5 hydrolase compare
Atu2194 +0.3 1.3 hypothetical protein compare
Atu0236 +0.3 1.0 hypothetical protein compare
Atu0569 +0.3 2.9 flagellar motor protein, PAL/OmpA family compare
Atu0560 +0.3 2.4 flagellar motor protein compare
Atu1779 +0.3 1.0 hypothetical protein compare
Atu5511 +0.3 0.9 hypothetical protein compare
Atu3652 +0.3 2.2 hypothetical protein compare
Atu3041 +0.3 2.6 dipeptide ABC transporter substrate-binding protein compare
Atu0782 +0.3 2.2 hypothetical protein compare
Atu6159 +0.3 1.2 hypothetical protein compare
Atu0458 +0.3 2.3 hypothetical protein compare
Atu1857 +0.3 2.7 inositol monophosphatase family protein compare
Atu0591 +0.3 2.5 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu3020 +0.3 1.9 GntR family transcriptional regulator compare
Atu4149 +0.3 2.4 UDP-glucose 6-dehydrogenase compare
Atu1640 +0.3 1.4 hypothetical protein compare


Specific Phenotypes

For 20 genes in this experiment

For carbon source D-Glucuronic acid gamma lactone in Agrobacterium fabrum C58

For carbon source D-Glucuronic acid gamma lactone across organisms