Experiment set2IT061 for Magnetospirillum magneticum AMB-1

Compare to:

150_an_nonmag_1

200 most important genes:

  gene name fitness t score description  
AMB_RS24680 -6.1 -1.5 hypothetical protein compare
AMB_RS21040 -5.8 -0.8 hypothetical protein compare
AMB_RS17335 -5.2 -1.6 N-acyl-L-homoserine lactone synthetase compare
AMB_RS03045 -4.8 -1.2 hydrogen peroxide-inducible genes activator compare
AMB_RS21290 -4.4 -1.3 DUF4139 domain-containing protein compare
AMB_RS00820 -4.4 -2.0 GDP-L-fucose synthase compare
AMB_RS17350 -4.3 -1.9 rubrerythrin compare
AMB_RS22280 -4.3 -8.6 hypothetical protein compare
AMB_RS11640 -4.1 -1.9 UbiX family flavin prenyltransferase compare
AMB_RS19325 -4.1 -12.2 NAD(P)/FAD-dependent oxidoreductase compare
AMB_RS04280 -4.1 -13.3 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS19545 -4.0 -1.3 elongation factor 4 compare
AMB_RS17280 -4.0 -1.3 MarR family transcriptional regulator compare
AMB_RS00960 -4.0 -7.4 DNA-binding response regulator compare
AMB_RS17235 -4.0 -1.1 AsmA family protein compare
AMB_RS02725 -4.0 -1.1 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS14175 -3.9 -1.2 COQ9 family protein compare
AMB_RS18590 -3.8 -1.1 glycosyltransferase family 2 protein compare
AMB_RS05435 -3.8 -1.5 ABC transporter permease compare
AMB_RS21535 -3.7 -0.9 cyclic nucleotide-binding domain-containing protein compare
AMB_RS00010 -3.6 -1.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS20350 -3.5 -10.6 aspartate 1-decarboxylase compare
AMB_RS24240 -3.5 -0.9 hypothetical protein compare
AMB_RS22450 -3.5 -6.8 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS12920 -3.5 -1.8 exo-beta-1,3-glucanase compare
AMB_RS00965 -3.5 -1.2 membrane protein compare
AMB_RS03060 -3.4 -1.1 peptidoglycan editing factor PgeF compare
AMB_RS08330 -3.4 -1.6 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS01330 -3.3 -2.0 glycosyltransferase family 39 protein compare
AMB_RS01605 -3.3 -0.9 aspartate aminotransferase family protein compare
AMB_RS07010 -3.3 -6.9 ATP-dependent helicase compare
AMB_RS15295 -3.2 -1.1 iron donor protein CyaY compare
AMB_RS12190 -3.2 -1.1 hypothetical protein compare
AMB_RS22235 -3.2 -1.1 RNase adaptor protein RapZ compare
AMB_RS11425 -3.2 -1.7 ribonuclease III compare
AMB_RS01190 -3.2 -5.1 UbiD family decarboxylase compare
AMB_RS00355 -3.1 -4.8 radical SAM protein compare
AMB_RS23155 -3.1 -0.8 two-component sensor histidine kinase compare
AMB_RS06550 -3.1 -1.3 lysophospholipase compare
AMB_RS03230 -3.1 -1.2 hypothetical protein compare
AMB_RS07070 -3.0 -1.6 Crp/Fnr family transcriptional regulator compare
AMB_RS07660 -3.0 -0.8 hypothetical protein compare
AMB_RS10730 -3.0 -0.8 hypothetical protein compare
AMB_RS05505 -2.9 -5.8 GDP-mannose 4,6-dehydratase compare
AMB_RS16130 -2.9 -3.5 phosphoglycerate dehydrogenase compare
AMB_RS23245 -2.9 -0.6 Ni,Fe-hydrogenase maturation factor compare
AMB_RS11195 -2.9 -0.6 sulfate adenylyltransferase subunit 2 compare
AMB_RS17625 -2.9 -7.9 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS06155 -2.8 -3.1 hypothetical protein compare
AMB_RS24350 -2.8 -0.9 hypothetical protein compare
AMB_RS22030 -2.8 -0.5 membrane protein insertion efficiency factor YidD compare
AMB_RS12785 -2.8 -2.5 murein transglycosylase compare
AMB_RS03725 -2.8 -4.6 DNA helicase II compare
AMB_RS02525 -2.7 -9.1 U32 family peptidase compare
AMB_RS23195 -2.7 -3.5 ABC transporter ATP-binding protein compare
AMB_RS24545 -2.7 -0.7 hypothetical protein compare
AMB_RS15610 -2.7 -4.3 hypothetical protein compare
AMB_RS21750 -2.7 -0.6 DNA-binding response regulator compare
AMB_RS14880 -2.6 -1.5 response regulator receiver modulated metal-depenent phosphohydrolase compare
AMB_RS18850 -2.6 -2.7 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS22150 -2.6 -0.5 MarR family transcriptional regulator compare
AMB_RS16025 -2.6 -4.0 MFS transporter compare
AMB_RS07630 -2.6 -0.7 hypothetical protein compare
AMB_RS05910 -2.5 -0.6 hypothetical protein compare
AMB_RS23090 -2.5 -3.1 NAD(P)-dependent oxidoreductase compare
AMB_RS14035 -2.5 -4.5 endopeptidase La compare
AMB_RS13170 -2.5 -0.5 electron transport complex subunit RsxG compare
AMB_RS11780 -2.4 -4.7 glutamate synthase subunit beta compare
AMB_RS20145 -2.4 -0.7 chromosome segregation ATPase compare
AMB_RS22315 -2.4 -1.4 membrane protein compare
AMB_RS02880 -2.3 -1.1 hypothetical protein compare
AMB_RS13900 -2.3 -1.7 efflux RND transporter periplasmic adaptor subunit compare
AMB_RS07075 -2.3 -6.8 cytochrome c-552 precursor compare
AMB_RS22580 -2.3 -8.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS19860 -2.3 -8.9 HlyC/CorC family transporter compare
AMB_RS14520 -2.3 -1.8 1,4-beta-N-acetylmuramidase compare
AMB_RS15620 -2.3 -4.2 RluA family pseudouridine synthase compare
AMB_RS01080 -2.3 -1.2 exodeoxyribonuclease VII large subunit compare
AMB_RS01160 -2.3 -3.0 glycosyltransferase compare
AMB_RS04630 -2.2 -0.3 tRNA-Met compare
AMB_RS23205 -2.2 -6.3 glycosyl transferase compare
AMB_RS19340 -2.2 -0.4 EamA family transporter compare
AMB_RS21435 -2.2 -13.5 methylmalonyl-CoA mutase compare
AMB_RS16100 -2.2 -3.0 RNA polymerase sigma factor RpoH compare
AMB_RS14495 -2.2 -6.7 aminotransferase class V-fold PLP-dependent enzyme compare
AMB_RS08265 -2.2 -1.3 hypothetical protein compare
AMB_RS11190 -2.2 -2.7 phosphoadenylyl-sulfate reductase compare
AMB_RS05220 -2.1 -0.4 hypothetical protein compare
AMB_RS05210 -2.1 -5.5 hypothetical protein compare
AMB_RS12385 -2.1 -3.5 alanine--glyoxylate aminotransferase family protein compare
AMB_RS20665 -2.1 -0.6 class I SAM-dependent methyltransferase compare
AMB_RS22965 -2.1 -2.3 XRE family transcriptional regulator compare
AMB_RS09295 -2.0 -1.0 carboxymuconolactone decarboxylase family protein compare
AMB_RS23210 -2.0 -8.5 glycosyl transferase compare
AMB_RS13145 -2.0 -2.3 positive regulator of sigma E activity compare
AMB_RS13165 -2.0 -3.4 electron transporter RnfD compare
AMB_RS00120 -2.0 -2.9 YggS family pyridoxal phosphate-dependent enzyme compare
AMB_RS14855 -2.0 -1.4 molybdate ABC transporter substrate-binding protein compare
AMB_RS23095 -2.0 -5.1 class I SAM-dependent methyltransferase compare
AMB_RS09635 -2.0 -1.4 hypothetical protein compare
AMB_RS19790 -2.0 -1.4 NAD(P)-dependent oxidoreductase compare
AMB_RS05500 -1.9 -6.6 GDP-mannose 4,6 dehydratase compare
AMB_RS14800 -1.9 -0.7 hypothetical protein compare
AMB_RS22565 -1.9 -7.8 MucR family transcriptional regulator compare
AMB_RS11820 -1.9 -2.7 transcriptional regulator NrdR compare
AMB_RS11180 -1.9 -4.2 rhodanese-like domain-containing protein compare
AMB_RS21495 -1.9 -0.6 DUF484 domain-containing protein compare
AMB_RS12355 -1.9 -0.6 ABC transporter ATP-binding protein compare
AMB_RS02610 -1.8 -0.4 hypothetical protein compare
AMB_RS01830 -1.8 -0.3 hypothetical protein compare
AMB_RS18930 -1.8 -0.8 Flp pilus assembly protein CpaB compare
AMB_RS04510 -1.8 -2.6 ferrous iron transporter compare
AMB_RS20460 -1.8 -2.3 hypothetical protein compare
AMB_RS00455 -1.8 -4.9 KR domain-containing protein compare
AMB_RS15500 -1.8 -1.5 ABC transporter ATP-binding protein compare
AMB_RS20860 -1.8 -0.8 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AMB_RS07700 -1.8 -0.6 hypothetical protein compare
AMB_RS21280 -1.8 -1.6 TVP38/TMEM64 family protein compare
AMB_RS10500 -1.8 -1.7 XRE family transcriptional regulator compare
AMB_RS05560 -1.8 -1.6 hypothetical protein compare
AMB_RS08580 -1.8 -1.1 hypothetical protein compare
AMB_RS14200 -1.8 -1.9 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha compare
AMB_RS02530 -1.8 -6.2 U32 family peptidase compare
AMB_RS21800 -1.8 -1.3 hypothetical protein compare
AMB_RS11805 -1.8 -7.6 MucR family transcriptional regulator compare
AMB_RS11155 -1.8 -2.3 DNA-binding response regulator compare
AMB_RS15550 -1.8 -4.5 copper chaperone PCu(A)C compare
AMB_RS10200 -1.8 -8.0 4-hydroxybenzoyl-CoA reductase subunit alpha compare
AMB_RS19565 -1.7 -3.6 peptidase M23 compare
AMB_RS24000 -1.7 -1.7 glycosyltransferase family 1 protein compare
AMB_RS03610 -1.7 -6.2 transcription elongation factor GreA compare
AMB_RS22325 -1.7 -3.4 4Fe-4S binding domain-containing protein compare
AMB_RS04325 -1.7 -4.2 TetR/AcrR family transcriptional regulator compare
AMB_RS05510 -1.7 -4.0 glycosyltransferase compare
AMB_RS11500 -1.7 -1.2 XRE family transcriptional regulator compare
AMB_RS05105 -1.7 -1.7 PAS domain S-box protein compare
AMB_RS21385 -1.7 -2.9 helix-turn-helix transcriptional regulator compare
AMB_RS06785 -1.7 -0.6 hypothetical protein compare
AMB_RS22575 -1.6 -7.0 GNAT family N-acetyltransferase compare
AMB_RS03780 -1.6 -0.5 hypothetical protein compare
AMB_RS17450 -1.6 -0.4 DUF1987 domain-containing protein compare
AMB_RS13180 -1.6 -1.6 protein rnfH compare
AMB_RS06755 -1.6 -1.2 hypothetical protein compare
AMB_RS03110 -1.6 -1.1 membrane protein compare
AMB_RS13175 -1.6 -5.5 electron transport complex subunit E compare
AMB_RS18505 -1.5 -1.0 hypothetical protein compare
AMB_RS07120 -1.5 -3.6 heme d1 biosynthesis radical SAM protein NirJ compare
AMB_RS17945 -1.5 -1.0 hypothetical protein compare
AMB_RS18325 -1.5 -2.4 class I SAM-dependent methyltransferase compare
AMB_RS22005 -1.5 -0.5 HD domain-containing protein compare
AMB_RS13160 -1.5 -7.6 electron transport complex subunit RsxC compare
AMB_RS21455 -1.5 -2.9 XRE family transcriptional regulator compare
AMB_RS10120 -1.5 -2.3 DUF1476 domain-containing protein compare
AMB_RS17795 -1.5 -0.6 hypothetical protein compare
AMB_RS05205 -1.5 -5.0 MFS transporter compare
AMB_RS17445 -1.5 -1.5 hypothetical protein compare
AMB_RS20595 -1.5 -1.8 ribosome maturation factor compare
AMB_RS07110 -1.5 -1.1 Lrp/AsnC family transcriptional regulator compare
AMB_RS22665 -1.5 -0.9 lipopolysaccharide heptosyltransferase family protein compare
AMB_RS10210 -1.4 -6.5 xanthine and CO dehydrogenase maturation factor compare
AMB_RS23325 -1.4 -2.5 hypothetical protein compare
AMB_RS18145 -1.4 -2.9 GntR family transcriptional regulator compare
AMB_RS12590 -1.4 -5.5 tetratricopeptide repeat protein compare
AMB_RS02835 -1.4 -1.2 two-component sensor histidine kinase compare
AMB_RS02340 -1.4 -0.8 nuclease inhibitor protein compare
AMB_RS08190 -1.4 -1.2 hypothetical protein compare
AMB_RS17615 -1.4 -2.8 PDZ domain-containing protein compare
AMB_RS01910 -1.4 -0.4 head decoration protein compare
AMB_RS12410 -1.4 -4.6 excinuclease ABC subunit UvrA compare
AMB_RS09520 -1.4 -1.4 hypothetical protein compare
AMB_RS10195 -1.4 -4.4 4-hydroxybenzoyl-CoA reductase subunit gamma compare
AMB_RS11230 -1.4 -6.1 heme A synthase compare
AMB_RS07065 -1.4 -3.9 Crp/Fnr family transcriptional regulator compare
AMB_RS07745 -1.4 -1.1 disulfide bond formation protein B compare
AMB_RS11535 -1.4 -0.4 ChbG/HpnK family deacetylase compare
AMB_RS03835 -1.4 -1.2 YicC family protein compare
AMB_RS17365 -1.4 -5.1 acriflavine resistance protein B compare
AMB_RS16625 -1.4 -2.9 hypothetical protein compare
AMB_RS01430 -1.4 -1.8 hypothetical protein compare
AMB_RS11775 -1.4 -9.1 glutamate synthase large subunit compare
AMB_RS09280 -1.3 -1.8 ArsR family transcriptional regulator compare
AMB_RS06280 -1.3 -3.4 hypothetical protein compare
AMB_RS00240 -1.3 -1.2 hypothetical protein compare
AMB_RS22800 -1.3 -1.3 glutathione synthase compare
AMB_RS19405 -1.3 -0.4 DUF1491 domain-containing protein compare
AMB_RS24695 -1.3 -1.6 hypothetical protein compare
AMB_RS09925 -1.3 -2.5 hybrid sensor histidine kinase/response regulator compare
AMB_RS23295 -1.3 -1.9 cytochrome c compare
AMB_RS10725 -1.3 -1.9 hypothetical protein compare
AMB_RS10750 -1.3 -2.5 RNA methyltransferase compare
AMB_RS17420 -1.3 -3.1 oxidoreductase compare
AMB_RS13585 -1.3 -1.7 alpha/beta hydrolase compare
AMB_RS15320 -1.3 -1.5 hypothetical protein compare
AMB_RS16705 -1.3 -0.7 LysR family transcriptional regulator compare
AMB_RS06200 -1.3 -1.2 Crp/Fnr family transcriptional regulator compare
AMB_RS10640 -1.3 -1.2 endolytic transglycosylase MltG compare
AMB_RS01175 -1.3 -4.2 C4-dicarboxylate ABC transporter compare
AMB_RS19240 -1.2 -3.8 UvrABC system protein C compare
AMB_RS00480 -1.2 -2.7 methyltransferase domain-containing protein compare
AMB_RS14095 -1.2 -2.4 DUF4131 domain-containing protein compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms