Experiment set2IT060 for Agrobacterium fabrum C58

Compare to:

Methyl alpha-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -8.3 -5.7 phosphoribosyl c-AMP cyclohydrolase compare
Atu1850 -7.3 -5.1 phosphoribosylformylglycinamidine synthetase II compare
Atu0099 -7.1 -4.9 prephenate dehydratase compare
Atu2036 -7.0 -4.8 acetolactate synthase III, large subunit compare
Atu1845 -7.0 -4.8 phosphoribosylformylglycinamidine synthase I compare
Atu2289 -6.9 -10.6 anthranilate synthase component I and II compare
Atu2264 -6.9 -6.7 2-isopropylmalate synthase compare
Atu0486 -6.9 -4.8 dihydroorotate dehydrogenase compare
Atu1307 -6.9 -6.7 dihydroorotase compare
Atu2726 -6.8 -14.5 pyruvate carboxylase compare
Atu2709 -6.7 -12.1 3-isopropylmalate dehydratase, large subunit compare
Atu2791 -6.7 -6.5 3-isopropylmalate dehydrogenase compare
Atu1588 -6.5 -6.3 homoserine dehydrogenase compare
Atu3706 -6.5 -4.5 D-3-phosphoglycerate dehydrogenase compare
Atu1075 -6.4 -4.5 amidophosphoribosyltransferase compare
Atu0400 -6.4 -4.4 orotate phosphoribosyltransferase compare
Atu2718 -6.4 -4.4 homoserine O-succinyltransferase compare
Atu3342 -6.3 -4.4 trehalose utilization-like protein compare
Atu1844 -6.3 -4.4 Phosphoribosylformylglycinamidine synthetase compare
Atu3885 -6.3 -4.4 inositol monophosphatase compare
Atu2650 -6.2 -11.2 glycerol-3-phosphate dehydrogenase compare
Atu1205 -6.2 -11.1 threonine dehydratase compare
Atu0432 -6.1 -7.3 O-succinylhomoserine sulfhydrylase compare
Atu3783 -6.1 -15.8 glutamate synthase subunit beta compare
Atu1687 -6.1 -10.2 anthranilate phosphoribosyltransferase compare
Atu3784 -6.1 -23.4 glutamate synthase large subunit compare
Atu3754 -6.0 -5.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2040 -5.9 -4.0 phosphoserine phosphatase compare
Atu1141 -5.7 -5.9 Phosphoribosylglycinamide synthetase compare
Atu1308 -5.7 -5.5 aspartate carbamoyl transferase catalytic subunit compare
Atu3340 -5.7 -9.7 trehalose/maltose ABC transporter permease compare
Atu0537 -5.6 -3.9 histidinol dehydrogenase compare
Atu1688 -5.6 -3.9 indole-3-glycerol-phosphate synthase compare
Atu0399 -5.5 -5.3 dihydroorotase compare
Atu0678 -5.5 -3.8 histidyl-tRNA synthetase compare
Atu0679 -5.4 -6.5 ATP phosphoribosyltransferase compare
Atu0017 -5.3 -3.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3755 -5.3 -5.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0038 -5.2 -6.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2747 -5.2 -12.0 hypothetical protein compare
Atu3739 -5.1 -2.9 phosphoglycerate kinase compare
Atu1140 -5.1 -5.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0298 -5.0 -7.6 orotidine 5 compare
Atu3339 -4.9 -10.5 trehalose/maltose ABC transporter permease compare
Atu2015 -4.8 -13.8 aminotransferase compare
Atu2790 -4.8 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu3338 -4.8 -13.9 trehalose/maltose ABC transporter substrate-binding protein compare
Atu0647 -4.7 -5.6 phosphoribosylamine--glycine ligase compare
Atu0184 -4.7 -3.2 glucokinase compare
Atu3707 -4.7 -4.4 phosphoserine aminotransferase compare
Atu1359 -4.6 -2.1 dnaK deletion suppressor protein compare
Atu0043 -4.5 -3.1 imidazoleglycerol-phosphate dehydratase compare
Atu0041 -4.3 -3.0 glutamine amidotransferase compare
Atu0039 -4.3 -2.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu3341 -4.2 -6.1 trehalose/maltose ABC transporter ATPase compare
Atu1030 -4.2 -2.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0434 -4.0 -4.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3482 -3.8 -6.9 pantoate--beta-alanine ligase compare
Atu3469 -3.7 -3.5 phosphoglyceromutase compare
Atu3483 -3.3 -6.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1589 -3.3 -8.6 aminotransferase, class I compare
Atu2155 -2.9 -17.9 methionine synthase compare
Atu0030 -2.7 -2.4 phosphocarrier protein HPr compare
Atu4711 -2.6 -7.5 two component sensor kinase compare
Atu1456 -2.6 -11.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2548 -2.5 -15.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0040 -2.5 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0769 -2.5 -2.5 protoheme IX farnesyltransferase compare
Atu0598 -2.4 -8.8 phosphogluconate dehydratase compare
Atu4096 -2.3 -8.9 nicotinate-nucleotide pyrophosphorylase compare
Atu1454 -2.2 -9.5 siroheme synthase compare
Atu1686 -2.2 -12.6 peptidyl-prolyl cis-trans isomerse D compare
Atu0346 -2.2 -2.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0641 -2.1 -4.6 hypothetical protein compare
Atu4098 -2.1 -11.8 quinolinate synthetase compare
Atu5451 -2.0 -1.7 hypothetical protein compare
Atu6036 -2.0 -1.2 entry-exclusion protein compare
Atu0031 -2.0 -1.9 PTS system, IIA component compare
Atu3731 -2.0 -8.1 5-formyltetrahydrofolate cyclo-ligase compare
Atu0062 -1.9 -8.1 transcriptional regulator, ROK family compare
Atu3290 -1.9 -7.1 phosphomethylpyrimidine kinase compare
Atu3730 -1.8 -1.8 hypothetical protein compare
Atu1570 -1.8 -1.3 hypothetical protein compare
Atu3997 -1.7 -12.5 biotin synthetase compare
Atu2569 -1.7 -11.7 thiamine biosynthesis protein compare
Atu0419 -1.7 -2.5 two component sensor kinase compare
Atu3343 -1.7 -8.4 trehalose utilization-like protein compare
Atu1620 -1.6 -9.7 triosephosphate isomerase compare
Atu1455 -1.6 -3.0 hypothetical protein compare
Atu1219 -1.5 -1.4 hypothetical protein compare
Atu3289 -1.5 -3.4 thiamine-phosphate pyrophosphorylase compare
Atu2795 -1.5 -7.3 cobalamin biosynthetic protein compare
Atu1464 -1.5 -6.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu0354 -1.4 -2.1 ferric uptake regulator compare
Atu1542 -1.4 -4.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2804 -1.4 -7.9 cobaltochelatase subunit compare
Atu2209 -1.4 -2.3 pyrroline-5-carboxylate reductase compare
Atu0029 -1.3 -5.3 S-adenosylhomocysteine hydrolase compare
Atu1462 -1.3 -8.2 glycine cleavage system protein P2 compare
Atu2684 -1.3 -2.2 hypothetical protein compare
Atu2796 -1.3 -4.9 precorrin-4 C11-methyltransferase compare
Atu2807 -1.3 -6.0 cob(I)alamin adenosyltransferase compare
Atu4514 -1.3 -3.2 RpiR family transcriptional regulator compare
Atu2267 -1.3 -5.3 hypothetical protein compare
Atu0768 -1.3 -7.6 cytochrome-c oxidase chain I compare
Atu6114 -1.3 -1.5 hypothetical protein compare
Atu0792 -1.3 -3.1 hypothetical protein compare
Atu2802 -1.3 -5.5 precorrin-8X methylmutase compare
Atu3998 -1.3 -7.5 8-amino-7-oxononanoate synthase compare
Atu2809 -1.3 -5.8 cobalamin biosynthesis protein compare
Atu4375 -1.3 -6.6 hypothetical protein compare
Atu4374 -1.2 -4.6 hypothetical protein compare
Atu0101 -1.2 -4.3 cytochrome c compare
Atu4372 -1.2 -5.7 ribose ABC transporter permease compare
Atu2803 -1.2 -3.0 Cobalamin biosynthesis associated protein compare
Atu1463 -1.2 -3.5 glycine cleavage system component H compare
Atu1286 -1.2 -3.3 hypothetical protein compare
Atu2805 -1.2 -5.1 cobalamin synthesis protein compare
Atu2793 -1.2 -3.9 cobyrinic acid a,c-diamide synthase compare
Atu4097 -1.2 -4.9 L-aspartate oxidase compare
Atu8012 -1.2 -1.9 hypothetical protein compare
Atu1163 -1.2 -1.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3288 -1.2 -4.4 hydroxyethylthiazole kinase compare
Atu2800 -1.2 -3.5 precorrin-3B C17-methyltransferase compare
Atu4317 -1.2 -3.3 TetR family transcriptional regulator compare
Atu0723 -1.1 -1.4 FAD dependent oxidoreductase compare
Atu2123 -1.1 -5.3 methylenetetrahydrofolate reductase compare
Atu0876 -1.1 -1.6 superoxide dismutase compare
Atu0771 -1.1 -5.1 cytochrome c oxidase subunit III compare
Atu1242 -1.1 -5.7 cytochrome oxidase assembly factor compare
Atu0767 -1.1 -4.6 cytochrome c oxidase subunit II compare
Atu4053 -1.1 -1.5 succinoglycan biosynthesis protein compare
Atu2207 -1.1 -2.1 two component sensor kinase compare
Atu0595 -1.1 -6.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu0501 -1.1 -7.3 acyl-CoA dehydrogenase compare
Atu5088 -1.1 -2.1 hypothetical protein compare
Atu0322 -1.1 -3.8 enoyl CoA hydratase compare
Atu0386 -1.1 -1.9 hypothetical protein compare
Atu2799 -1.1 -4.0 precorrin-6x reductase compare
Atu4000 -1.1 -7.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu0405 -1.1 -7.9 long-chain-fatty-acid-CoA-ligase compare
Atu0361 -1.1 -2.4 transcriptional regulator compare
Atu4773 -1.1 -2.0 two component response regulator compare
Atu2798 -1.0 -3.4 precorrin-6y methyltransferase compare
Atu0770 -1.0 -3.2 cytochrome C oxidase assembly protein compare
Atu2808 -1.0 -5.1 cobyric acid synthase compare
Atu3144 -1.0 -4.2 GntR family transcriptional regulator compare
Atu1891 -1.0 -2.8 cobalamin biosynthesis protein compare
Atu2205 -1.0 -3.7 transcriptional regulator, MarR family compare
Atu0591 -1.0 -6.8 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0593 -1.0 -5.9 ABC transporter, membrane spanning protein compare
Atu4373 -1.0 -5.8 LacI family transcriptional regulator compare
Atu5160 -1.0 -2.4 transcriptional regulator protein compare
Atu2801 -1.0 -2.6 precorrin-2 C20 methyltransferase compare
Atu0592 -1.0 -4.1 ABC transporter, membrane spanning protein compare
Atu4029 -1.0 -4.4 gluconolactonase compare
Atu3485 -1.0 -7.1 short chain dehydrogenase compare
Atu5125 -1.0 -3.2 GntR family transcriptional regulator compare
Atu4685 -1.0 -5.1 LacI family transcriptional regulator compare
Atu2239 -1.0 -3.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3505 -1.0 -4.6 3-hydroxyisobutyryl-CoA hydrolase compare
Atu4001 -1.0 -5.5 3-oxoacyl-ACP synthase compare
Atu1457 -0.9 -2.3 hypothetical protein compare
Atu1526 -0.9 -5.0 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu1952 -0.9 -1.5 hypothetical protein compare
Atu3162 -0.9 -6.0 LacI family transcriptional regulator compare
Atu4370 -0.9 -6.1 sugar ABC transporter ATPase compare
Atu2491 -0.9 -2.1 hypothetical protein compare
Atu0331 -0.9 -1.7 sigma-54 modulation protein compare
Atu3908 -0.9 -5.9 GntR family transcriptional regulator compare
Atu0115 -0.9 -1.0 hypothetical protein compare
Atu0185 -0.9 -2.0 methylglyoxal synthase compare
Atu4576 -0.9 -4.3 ROK family transcriptional regulator compare
Atu1446 -0.9 -2.0 two component response regulator compare
Atu3963 -0.9 -4.1 GntR family transcriptional regulator compare
Atu0894 -0.9 -1.7 ABC transporter, membrane spanning protein compare
Atu0977 -0.9 -2.5 serine protease DO-like protease compare
Atu4674 -0.8 -6.1 GntR family transcriptional regulator compare
Atu0981 -0.8 -5.4 glutamate-ammonia-ligase adenylyltransferase compare
Atu5513 -0.8 -1.1 cold shock protein compare
Atu4369 -0.8 -4.9 sugar ABC transporter substrate-binding protein compare
Atu5429 -0.8 -2.7 transcriptional regulator compare
Atu8130 -0.8 -4.1 hypothetical protein compare
Atu4176 -0.8 -4.2 hypothetical protein compare
Atu0986 -0.8 -1.0 hypothetical protein compare
Atu6098 -0.8 -0.6 transcriptional regulator, HTH family compare
Atu3226 -0.8 -4.1 GntR family transcriptional regulator compare
Atu1705 -0.8 -3.1 SEC-independent protein translocase protein compare
Atu0503 -0.8 -5.6 enoyl-CoA hydratase compare
Atu2017 -0.8 -1.1 hypothetical protein compare
Atu3750 -0.8 -1.8 thiamine-phosphate pyrophosphorylase compare
Atu1847 -0.8 -1.7 hypothetical protein compare
Atu2442 -0.8 -2.4 hypothetical protein compare
Atu3712 -0.8 -1.2 hypothetical protein compare
Atu2456 -0.8 -3.7 lactoylglutathione lyase compare
Atu1254 -0.8 -1.0 transcriptional regulator, ArsR family compare
Atu2554 -0.7 -1.5 lysyl-tRNA synthetase compare
Atu2821 -0.7 -3.3 transcriptional regulator, GntR family compare
Atu0357 -0.7 -4.3 phosphate starvation inducible protein compare
Atu4232 -0.7 -2.3 GntR family transcriptional regulator compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Methyl alpha-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source Methyl alpha-D-glucopyranoside across organisms