Experiment set2IT059 for Agrobacterium fabrum C58

Compare to:

Stachyose hydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu5430 +1.3 2.6 hypothetical protein compare
Atu1836 +1.2 2.3 hypothetical protein compare
Atu3011 +1.2 4.2 ArsR family transcriptional regulator compare
Atu1327 +1.1 3.7 NADH-ubiquinone oxidoreductase compare
Atu0824 +1.1 2.0 hypothetical protein compare
Atu1225 +1.1 1.7 hypothetical protein compare
Atu1846 +1.0 2.3 hypothetical protein compare
Atu5164 +0.9 1.2 type IV secretion protein AvhB3 compare
Atu1683 +0.9 2.9 hypothetical protein compare
Atu3014 +0.9 2.2 hypothetical protein compare
Atu3001 +0.8 2.1 hypothetical protein compare
Atu3008 +0.8 1.2 hypothetical protein compare
Atu4890 +0.8 1.7 IS426 transposase compare
Atu2583 +0.8 5.6 glycosyltransferase compare
Atu2582 +0.7 4.6 UDP-glucose/GDP-mannose dehydrogenase compare
Atu6138 +0.7 3.1 Repressor of the acc and arc operons compare
Atu0941 +0.7 0.8 hypothetical protein compare
Atu2183 +0.7 4.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3032 +0.7 2.4 hypothetical protein compare
Atu1581 +0.7 2.0 hypothetical protein compare
Atu4608 +0.7 5.4 hypothetical protein compare
Atu5034 +0.7 2.0 hypothetical protein compare
Atu4897 +0.7 1.5 hypothetical protein compare
Atu0904 +0.6 3.0 hypothetical protein compare
Atu5088 +0.6 1.8 hypothetical protein compare
Atu2662 +0.6 1.4 acetyltransferase compare
Atu3619 +0.6 1.5 hypothetical protein compare
Atu0540 +0.6 1.7 hypothetical protein compare
Atu3016 +0.6 3.1 phosphoglyceromutase compare
Atu0119 +0.6 1.1 hypothetical protein compare
Atu2273 +0.6 1.8 hypothetical protein compare
Atu2633 +0.6 1.1 RhtB family transporter compare
Atu2379 +0.6 4.5 phosphomannomutase compare
Atu4888 +0.6 2.5 hypothetical protein compare
Atu2577 +0.6 4.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu2729 +0.6 2.1 hypothetical protein compare
Atu4609 +0.6 4.8 glycosyltransferase compare
Atu3013 +0.6 2.0 hypothetical protein compare
Atu4613 +0.6 4.9 glycosyltransferase compare
Atu4610 +0.6 4.7 sugar nucleotide epimerase/dehydratase compare
Atu2592 +0.6 3.0 hypothetical protein compare
Atu8054 +0.6 0.5 hypothetical protein compare
Atu3026 +0.6 3.2 short chain dehydrogenase compare
Atu3515 +0.6 2.6 hypothetical protein compare
Atu0595 +0.6 4.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu1559 +0.6 2.4 hypothetical protein compare
Atu8202 +0.5 2.6 hypothetical protein compare
Atu0572 +0.5 2.3 hypothetical protein compare
Atu3604 +0.5 1.1 hypoxanthine phosphoribosyltransferase compare
Atu0026 +0.5 0.8 hypothetical protein compare
Atu2584 +0.5 1.9 hypothetical protein compare
Atu4869 +0.5 2.5 hypothetical protein compare
Atu3644 +0.5 2.4 hypothetical protein compare
Atu0746 +0.5 1.8 hypothetical protein compare
Atu3353 +0.5 3.6 mannose-1-phosphate guanylyltransferase compare
Atu2591 +0.5 3.0 glucosyltransferase compare
Atu6039 +0.5 2.7 conjugal transfer protein compare
Atu4050 +0.5 1.3 UTP-glucose-1-phosphate uridylyltransferase compare
Atu4881 +0.5 2.6 hypothetical protein compare
Atu2585 +0.5 3.0 hypothetical protein compare
Atu4582 +0.5 2.4 ferredoxin compare
Atu8096 +0.5 1.2 hypothetical protein compare
Atu3603 +0.5 1.7 two component response regulator compare
Atu8144 +0.5 1.3 hypothetical protein compare
Atu1302 +0.5 1.2 hypothetical protein compare
Atu5451 +0.5 0.8 hypothetical protein compare
Atu4607 +0.5 3.0 sugar acetylase compare
Atu2388 +0.5 3.4 ABC transporter, nucleotide binding/ATPase protein (nitrate) compare
Atu2832 +0.5 1.6 tRNA modification GTPase compare
Atu2177 +0.5 2.9 hypothetical protein compare
Atu3006 +0.5 2.0 hypothetical protein compare
Atu2163 +0.5 0.7 hypothetical protein compare
Atu2433 +0.5 0.9 hypothetical protein compare
Atu3010 +0.5 3.0 hypothetical protein compare
Atu3015 +0.5 2.8 hypothetical protein compare
Atu3792 +0.5 2.9 L-asparagine permease compare
Atu0295 +0.5 1.6 hypothetical protein compare
Atu3315 +0.5 1.5 UDP-glucose 4-epimerase compare
Atu8174 +0.5 1.6 hypothetical protein compare
Atu1634 +0.5 0.7 hypothetical protein compare
Atu2406 +0.4 1.7 hypothetical protein compare
Atu1387 +0.4 1.3 transcriptional regulator, GntR family compare
Atu4896 +0.4 0.9 acetyltransferase compare
Atu1884 +0.4 2.0 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu1682 +0.4 2.2 hypothetical protein compare
Atu4892 +0.4 3.1 hypothetical protein compare
Atu1325 +0.4 1.1 acetyltransferase compare
Atu0912 +0.4 0.8 Na+/H+ antiporter compare
Atu1103 +0.4 1.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3019 +0.4 2.7 hypothetical protein compare
Atu0580 +0.4 1.3 flagellar biosynthetic protein compare
Atu1591 +0.4 1.7 hypothetical protein compare
Atu4894 +0.4 2.6 transposase compare
Atu4615 +0.4 2.8 glucose-1-phosphate thymidylyltransferase compare
Atu3481 +0.4 1.4 enoyl-CoA hydratase compare
Atu1287 +0.4 1.4 hypothetical protein compare
Atu0786 +0.4 2.1 peptidase, family M16 compare
Atu2728 +0.4 2.2 beta (1-->2) glucan export ATP-binding protein compare
Atu3912 +0.4 2.7 hypothetical protein compare
Atu0236 +0.4 1.3 hypothetical protein compare
Atu8167 +0.4 3.0 putative transmembrane protein compare
Atu0809 +0.4 0.6 hypothetical protein compare
Atu2348 +0.4 2.0 sugar binding protein compare
Atu8022 +0.4 1.7 hypothetical protein compare
Atu4864 +0.4 2.3 MarR family transcriptional regulator compare
Atu2787 +0.4 0.6 hypothetical protein compare
Atu2590 +0.4 2.3 hypothetical protein compare
Atu0070 +0.4 2.6 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu1501 +0.4 2.1 hypothetical protein compare
Atu1980 +0.4 1.4 hypothetical protein compare
Atu4349 +0.4 1.6 hypothetical protein compare
Atu3029 +0.4 2.5 glucarate dehydratase compare
Atu1358 +0.4 1.3 hypothetical protein compare
Atu3024 +0.4 2.8 sugar ABC transporter permease compare
Atu1857 +0.4 2.7 inositol monophosphatase family protein compare
Atu5489 +0.4 1.3 hypothetical protein compare
Atu1004 +0.4 1.4 hypothetical protein compare
Atu3042 +0.4 2.4 hypothetical protein compare
Atu4345 +0.4 1.3 hypothetical protein compare
Atu4875 +0.4 1.5 hypothetical protein compare
Atu4391 +0.4 2.2 nitric oxide reductase NorE protein compare
Atu4148 +0.4 2.3 UDP-glucuronic acid epimerase compare
Atu4686 +0.4 1.3 hypothetical protein compare
Atu0193 +0.4 1.4 glutamine synthetase compare
Atu3027 +0.4 2.6 dehydrogenase compare
Atu3892 +0.4 1.5 hypothetical protein compare
Atu2322 +0.4 2.1 hypothetical protein compare
Atu2187 +0.4 1.9 transcriptional regulator, ArsR family compare
Atu5540 +0.4 0.5 hypothetical protein compare
Atu1701 +0.4 1.2 protein-L-isoaspartate O-methyltransferase compare
Atu1837 +0.4 2.4 transcriptional regulator compare
Atu1856 +0.4 2.2 inositol monophosphatase family protein compare
Atu0917 +0.4 1.8 hypothetical protein compare
Atu1190 +0.4 1.6 hypothetical protein compare
Atu0025 +0.4 1.3 hypothetical protein compare
Atu2034 +0.4 2.1 transcriptional regulator, ArsR family compare
Atu2325 +0.4 1.6 hypothetical protein compare
Atu0650 +0.4 2.9 hypothetical protein compare
Atu3387 +0.4 1.5 sigma factor compare
Atu3009 +0.4 0.6 exopolysaccharide production protein compare
Atu1970 +0.4 1.3 hypothetical protein compare
Atu1831 +0.4 2.2 hypothetical protein compare
Atu4874 +0.4 2.5 hypothetical protein compare
Atu2017 +0.4 0.7 hypothetical protein compare
Atu0050 +0.4 1.7 two component response regulator compare
Atu0210 +0.4 1.4 hypothetical protein compare
Atu0779 +0.4 2.3 peroxiredoxin compare
Atu1869 +0.4 2.1 hypothetical protein compare
Atu3516 +0.4 1.9 MutT family NTP pyrophosphatase compare
Atu8133 +0.4 1.4 hypothetical protein compare
Atu2236 +0.4 1.3 adenine phosphoribosyltransferase compare
Atu3631 +0.4 1.9 hypothetical protein compare
Atu0730 +0.4 1.3 hypothetical protein compare
Atu2293 +0.4 0.9 hypothetical protein compare
Atu4616 +0.4 0.9 dTDP-4-dehydrorhamnose reductase compare
Atu0163 +0.4 2.2 tonB protein compare
Atu1149 +0.4 0.6 adenylate cyclase compare
Atu3023 +0.4 2.2 sugar ABC transporter permease compare
Atu1880 +0.4 1.5 ABC transporter, membrane spanning protein (amino acid) compare
Atu4162 +0.4 2.5 two-component response regulator compare
Atu3692 +0.4 1.0 sigma factor compare
Atu1965 +0.3 1.4 UDP-glucose 4-epimerase compare
Atu3778 +0.3 2.1 UTP-glucose-1-phosphate uridylyltransferase compare
Atu3519 +0.3 2.5 peptidyl-prolyl cis-trans isomerase compare
Atu3311 +0.3 2.8 phosphomannose isomerase compare
Atu1213 +0.3 0.8 hypothetical protein compare
Atu4540 +0.3 1.0 protocatechuate 3,4-dioxygenase subunit beta compare
Atu5455 +0.3 1.5 hypothetical protein compare
Atu4485 +0.3 2.3 beta-glucosidase compare
Atu1083 +0.3 1.5 hypothetical protein compare
Atu2277 +0.3 2.6 adenylate cyclase protein compare
Atu1009 +0.3 0.8 hypothetical protein compare
Atu1905 +0.3 1.5 short chain dehydrogenase compare
Atu3033 +0.3 2.1 hypothetical protein compare
Atu4035 +0.3 1.7 two component response regulator compare
Atu0942 +0.3 1.9 MFS permease compare
Atu2104 +0.3 2.1 hypothetical protein compare
Atu0185 +0.3 1.6 methylglyoxal synthase compare
Atu1899 +0.3 1.9 ABC transporter, substrate binding protein (ribose) compare
Atu2515 +0.3 1.6 ABC transporter, nucleotide binding/ATPase protein (dipeptide) compare
Atu3022 +0.3 2.4 sugar ABC transporter permease compare
Atu3913 +0.3 2.2 biotin carboxylase compare
Atu0390 +0.3 2.2 ubiquinone/menaquinone biosynthesis methyltransferase compare
Atu8130 +0.3 2.2 hypothetical protein compare
Atu8126 +0.3 2.0 putative phage tail protein I compare
Atu3021 +0.3 2.0 sugar ABC transporter ATPase compare
Atu1777 +0.3 1.3 hypothetical protein compare
Atu0759 +0.3 2.1 hypothetical protein compare
Atu2198 +0.3 2.1 hypothetical protein compare
Atu1637 +0.3 1.2 hypothetical protein compare
Atu3421 +0.3 1.6 hypothetical protein compare
Atu8191 +0.3 0.6 hypothetical protein compare
Atu3718 +0.3 1.6 hypothetical protein compare
Atu4405 +0.3 1.5 periplasmic nitrate reductase NapE compare
Atu2249 +0.3 0.5 hypothetical protein compare
Atu3461 +0.3 0.9 GntR family transcriptional regulator compare
Atu4589 +0.3 1.1 transmembrane transport protein compare
Atu1968 +0.3 0.8 hypothetical protein compare
Atu4139 +0.3 1.0 hypothetical protein compare
Atu0875 +0.3 1.9 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Stachyose hydrate in Agrobacterium fabrum C58

For carbon source Stachyose hydrate across organisms