Experiment set2IT054 for Pseudomonas simiae WCS417

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D-Glucose-6-Phosphate sodium salt carbon source

200 most important genes:

  gene name fitness t score description  
PS417_18585 -6.6 -4.6 3-isopropylmalate dehydrogenase compare
PS417_01855 -6.4 -4.4 phosphoribosyl-AMP cyclohydrolase compare
PS417_18560 -6.1 -10.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_01575 -6.0 -6.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_18600 -5.8 -5.5 isopropylmalate isomerase compare
PS417_25720 -5.6 -10.1 anthranilate synthase component II compare
PS417_27040 -5.6 -5.5 3-phosphoglycerate dehydrogenase compare
PS417_23805 -5.5 -6.5 acetolactate synthase 3 regulatory subunit compare
PS417_25725 -5.4 -19.5 anthranilate synthase component I compare
PS417_04420 -5.3 -11.8 histidinol dehydrogenase compare
PS417_24745 -5.2 -5.0 gamma-glutamyl phosphate reductase compare
PS417_02005 -5.1 -12.4 glutamate synthase compare
PS417_23800 -5.1 -13.5 ketol-acid reductoisomerase compare
PS417_04415 -5.1 -7.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_26740 -5.0 -8.4 homoserine acetyltransferase compare
PS417_02510 -4.9 -8.5 ATP phosphoribosyltransferase regulatory subunit compare
PS417_00185 -4.8 -5.7 tryptophan synthase subunit beta compare
PS417_27795 -4.7 -2.1 orotate phosphoribosyltransferase compare
PS417_23810 -4.7 -14.6 acetolactate synthase 3 catalytic subunit compare
PS417_01565 -4.5 -3.5 imidazole glycerol phosphate synthase compare
PS417_16465 -4.5 -11.9 sirohydrochlorin ferrochelatase compare
PS417_06375 -4.5 -2.0 deoxycytidine triphosphate deaminase compare
PS417_02000 -4.5 -12.6 glutamate synthase compare
PS417_26745 -4.3 -5.4 methionine biosynthesis protein MetW compare
PS417_22685 -4.1 -16.2 Glucokinase (EC 2.7.1.2) (from data) conserved
PS417_01850 -4.0 -9.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_09725 -4.0 -10.9 transporter compare
PS417_18595 -4.0 -5.9 3-isopropylmalate dehydratase compare
PS417_12290 -3.9 -9.1 sulfite reductase compare
PS417_25710 -3.9 -2.4 indole-3-glycerol-phosphate synthase compare
PS417_22135 -3.8 -13.8 glucose/xylose ABC transporter, permease component 1 (from data) compare
PS417_22130 -3.8 -9.2 glucose/xylose ABC transporter, ATPase component (from data) compare
PS417_23545 -3.8 -4.2 gamma-glutamyl kinase compare
PS417_21035 -3.8 -15.2 multidrug transporter compare
PS417_27195 -3.8 -2.2 N-acetylglutamate synthase compare
PS417_02415 -3.7 -7.8 phosphoserine phosphatase compare
PS417_05595 -3.6 -7.9 ornithine carbamoyltransferase compare
PS417_18530 -3.5 -5.9 O-succinylhomoserine sulfhydrylase compare
PS417_23995 -3.5 -1.5 preprotein translocase subunit SecG compare
PS417_20985 -3.5 -5.2 porin compare
PS417_25715 -3.5 -4.4 anthranilate phosphoribosyltransferase compare
PS417_01580 -3.5 -1.8 imidazole glycerol phosphate synthase compare
PS417_23110 -3.4 -7.9 2-isopropylmalate synthase compare
PS417_22140 -3.4 -11.0 glucose/xylose ABC transporter, permease component 2 (from data) compare
PS417_01605 -3.3 -3.1 phosphoglycerate mutase compare
PS417_22680 -3.2 -6.0 chemotaxis protein CheY compare
PS417_22145 -3.2 -10.2 glucose/xylose ABC transporter, periplasmic substrate-binding component (from data) compare
PS417_22675 -3.1 -12.7 histidine kinase compare
PS417_00180 -3.1 -4.1 tryptophan synthase subunit alpha compare
PS417_26890 -3.0 -4.8 dihydroxy-acid dehydratase compare
PS417_20125 -2.9 -5.5 phosphoribosylglycinamide formyltransferase compare
PS417_08220 -2.9 -1.8 epimerase compare
PS417_12855 -2.9 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_04595 -2.8 -5.0 cell division protein MraZ compare
PS417_14940 -2.8 -3.6 LysR family transcriptional regulator compare
PS417_01710 -2.8 -8.6 histidine utilization repressor compare
PS417_03310 -2.7 -8.3 carbonate dehydratase compare
PS417_01570 -2.6 -2.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_27010 -2.6 -13.7 threonine dehydratase compare
PS417_26985 -2.5 -6.1 phosphoenolpyruvate-protein phosphotransferase compare
PS417_24155 -2.4 -3.4 ATP-binding protein compare
PS417_24835 -2.4 -6.7 hypothetical protein compare
PS417_22690 -2.3 -6.4 phosphogluconate dehydratase compare
PS417_26730 -2.3 -1.8 pyrroline-5-carboxylate reductase compare
PS417_16005 -2.3 -5.8 ATPase compare
PS417_20635 -2.1 -1.8 ABC transporter ATP-binding protein compare
PS417_20160 -2.1 -3.5 cysteine synthase compare
PS417_17485 -2.1 -7.1 membrane protein compare
PS417_08230 -2.0 -2.4 lipopolysaccharide biosynthesis protein RfbH compare
PS417_08200 -2.0 -4.7 hypothetical protein compare
PS417_24765 -2.0 -4.9 membrane protein compare
PS417_26995 -2.0 -9.9 phosphoserine phosphatase compare
PS417_26040 -2.0 -4.6 malate synthase compare
PS417_21750 -2.0 -14.2 acetyl-CoA synthetase compare
PS417_16490 -1.9 -2.9 cell division protein FtsK compare
PS417_20610 -1.9 -1.9 hypothetical protein compare
PS417_08195 -1.9 -9.2 hypothetical protein compare
PS417_22520 -1.9 -3.6 histidine kinase compare
PS417_08125 -1.9 -1.6 prephenate dehydratase compare
PS417_08225 -1.9 -6.6 acetolactate synthase compare
PS417_01560 -1.9 -2.0 imidazoleglycerol-phosphate dehydratase compare
PS417_28220 -1.9 -3.0 LysR family transcriptional regulator compare
PS417_21705 -1.8 -6.2 arginine N-succinyltransferase compare
PS417_08205 -1.8 -4.3 acetyltransferase compare
PS417_22385 -1.8 -11.4 quinolinate synthase A compare
PS417_03925 -1.8 -6.0 nicotinate-nucleotide pyrophosphorylase compare
PS417_17795 -1.7 -2.6 ABC transporter permease compare
PS417_25930 -1.7 -6.5 pyrroloquinoline quinone biosynthesis protein PqqC compare
PS417_21030 -1.7 -8.2 GntR family transcriptional regulator compare
PS417_17480 -1.7 -7.9 branched-chain amino acid ABC transporter substrate-binding protein compare
PS417_17450 -1.7 -3.9 amino acid ABC transporter substrate-binding protein compare
PS417_17490 -1.7 -2.4 ABC transporter ATP-binding protein compare
PS417_17420 -1.7 -5.8 ethanol oxidation regulatory protein ercA (from data) compare
PS417_17435 -1.6 -9.6 dehydrogenase compare
PS417_23770 -1.6 -2.4 exodeoxyribonuclease V subunit alpha compare
PS417_25940 -1.6 -7.0 pyrroloquinoline quinone biosynthesis protein PqqE compare
PS417_16990 -1.6 -7.3 acyl-CoA dehydrogenase compare
PS417_08245 -1.6 -1.7 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_25920 -1.5 -8.5 pyrroloquinoline quinone biosynthesis protein PqqF compare
PS417_20665 -1.5 -7.2 hypothetical protein compare
PS417_23775 -1.5 -3.1 exodeoxyribonuclease V subunit beta compare
PS417_09930 -1.4 -2.5 hypothetical protein compare
PS417_17495 -1.4 -4.2 multidrug ABC transporter permease compare
PS417_27035 -1.4 -4.3 FAD-linked oxidase compare
PS417_19335 -1.4 -4.0 isochorismatase compare
PS417_17415 -1.3 -3.4 histidine kinase compare
PS417_22570 -1.3 -1.4 H-NS histone compare
PS417_21700 -1.2 -4.6 arginine N-succinyltransferase compare
PS417_07170 -1.2 -4.3 hypothetical protein compare
PS417_21980 -1.2 -4.8 permease DsdX compare
PS417_13165 -1.2 -2.9 peroxidase compare
PS417_15750 -1.2 -2.5 protease compare
PS417_06200 -1.2 -4.4 protein-PII uridylyltransferase compare
PS417_14980 -1.2 -1.6 universal stress protein UspA compare
PS417_26805 -1.1 -1.3 cell division protein FtsE compare
PS417_27875 -1.1 -6.4 histidine kinase compare
PS417_17505 -1.1 -3.2 LuxR family transcriptional regulator compare
PS417_25380 -1.1 -1.7 hypothetical protein compare
PS417_08580 -1.1 -5.0 histidine kinase compare
PS417_14515 -1.1 -2.2 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_17455 -1.1 -2.5 cytochrome C compare
PS417_22450 -1.1 -1.0 ATP-dependent DNA helicase RuvA compare
PS417_08380 -1.1 -5.6 ABC transporter ATP-binding protein compare
PS417_01995 -1.0 -1.8 hypothetical protein compare
PS417_04860 -1.0 -5.7 ATPase compare
PS417_22500 -1.0 -6.5 porin compare
PS417_22445 -1.0 -2.5 ATP-dependent DNA helicase RuvB compare
PS417_08155 -1.0 -1.5 integration host factor subunit beta compare
PS417_14655 -1.0 -1.4 lysine transporter LysE compare
PS417_12310 -1.0 -6.0 methionine synthase compare
PS417_07595 -1.0 -3.4 PasA protein compare
PS417_00045 -1.0 -2.6 glycerol acyltransferase compare
PS417_23725 -1.0 -2.1 methylmalonate-semialdehyde dehydrogenase compare
PS417_27535 -1.0 -6.0 chemotaxis protein CheY compare
PS417_17425 -0.9 -3.2 hypothetical protein compare
PS417_00295 -0.9 -4.2 hypothetical protein compare
PS417_02705 -0.9 -2.6 urease accessory protein UreF compare
PS417_17925 -0.9 -2.3 acyl-CoA dehydrogenase compare
PS417_18435 -0.9 -2.8 hypothetical protein compare
PS417_20645 -0.9 -6.7 membrane protein compare
PS417_22125 -0.9 -6.1 porin compare
PS417_20620 -0.9 -3.5 glycosyl transferase family 2 compare
PS417_04050 -0.9 -2.1 peptide ABC transporter ATP-binding protein compare
PS417_01290 -0.9 -1.9 ADP-ribose diphosphatase compare
PS417_28050 -0.9 -1.7 hypothetical protein compare
PS417_23315 -0.9 -1.4 transcriptional regulator compare
PS417_02895 -0.9 -2.2 precorrin-6Y C5,15-methyltransferase compare
PS417_09710 -0.8 -2.3 dehydrogenase compare
PS417_09705 -0.8 -2.5 hypothetical protein compare
PS417_05815 -0.8 -3.5 recombinase RecA compare
PS417_27835 -0.8 -4.5 endoribonuclease compare
PS417_06045 -0.8 -2.6 membrane protein compare
PS417_20055 -0.8 -2.6 cob(II)yrinic acid a,c-diamide reductase compare
PS417_26850 -0.8 -0.9 twin-arginine translocation pathway signal protein compare
PS417_11615 -0.8 -1.5 urea ABC transporter ATP-binding protein compare
PS417_17945 -0.8 -0.9 hypothetical protein compare
PS417_27675 -0.8 -2.5 xanthine phosphoribosyltransferase compare
PS417_09700 -0.8 -2.4 transaldolase compare
PS417_26510 -0.8 -4.5 5,10-methylenetetrahydrofolate reductase compare
PS417_04380 -0.8 -1.4 ABC transporter permease compare
PS417_14075 -0.8 -1.3 hypothetical protein compare
PS417_28140 -0.8 -1.9 asparaginase compare
PS417_04180 -0.8 -2.4 GntR family transcriptional regulator compare
PS417_14200 -0.8 -2.3 hypothetical protein compare
PS417_12840 -0.8 -2.2 TetR family transcriptional regulator compare
PS417_24370 -0.7 -0.9 (2Fe-2S)-binding protein compare
PS417_21125 -0.7 -3.6 phosphoadenosine phosphosulfate reductase compare
PS417_22780 -0.7 -1.8 XRE family transcriptional regulator compare
PS417_07655 -0.7 -1.3 glycerophosphodiester phosphodiesterase compare
PS417_16495 -0.7 -2.7 leucyl/phenylalanyl-tRNA--protein transferase compare
PS417_05570 -0.7 -3.5 DeoR faimly transcriptional regulator compare
PS417_19425 -0.7 -0.9 allantoicase compare
PS417_15305 -0.7 -2.2 type VI secretion protein compare
PS417_26240 -0.7 -1.6 N-methylproline demethylase compare
PS417_05840 -0.7 -2.1 LuxR family transcriptional regulator compare
PS417_01435 -0.7 -1.1 hypothetical protein compare
PS417_03325 -0.7 -3.2 acid phosphatase compare
PS417_19625 -0.7 -2.5 histidine kinase compare
PS417_07000 -0.7 -2.0 hypothetical protein compare
PS417_15875 -0.7 -1.3 LuxR family transcriptional regulator compare
PS417_18360 -0.7 -1.1 hypothetical protein compare
PS417_22085 -0.7 -2.2 aldehyde dehydrogenase compare
PS417_18425 -0.7 -1.2 sporulation protein compare
PS417_07950 -0.7 -2.3 MFS transporter compare
PS417_12565 -0.7 -1.8 2-dehydro-3-deoxygluconokinase compare
PS417_19965 -0.7 -4.6 histidine kinase compare
PS417_28030 -0.7 -2.0 hypothetical protein compare
PS417_25390 -0.7 -3.0 MFS transporter compare
PS417_12935 -0.7 -2.1 RNA polymerase sigma factor compare
PS417_12355 -0.7 -1.5 magnesium chelatase compare
PS417_21690 -0.7 -3.1 N-succinylarginine dihydrolase compare
PS417_16570 -0.7 -4.1 isocitrate lyase compare
PS417_22775 -0.7 -3.6 histidine kinase compare
PS417_17705 -0.7 -1.8 LacI family transcriptional regulator compare
PS417_20310 -0.7 -2.0 hypothetical protein compare
PS417_13295 -0.7 -4.1 TetR family transcriptional regulator compare
PS417_00385 -0.7 -0.9 Fur family transcriptional regulator compare
PS417_06245 -0.7 -1.7 zinc metallopeptidase RseP compare
PS417_27305 -0.7 -2.9 5-formyltetrahydrofolate cyclo-ligase compare
PS417_02805 -0.6 -0.9 urease subunit gamma compare


Specific Phenotypes

For 16 genes in this experiment

For carbon source D-Glucose-6-Phosphate sodium salt in Pseudomonas simiae WCS417

For carbon source D-Glucose-6-Phosphate sodium salt across organisms