Experiment set2IT053 for Magnetospirillum magneticum AMB-1

Compare to:

30_an_nonmag_2

200 most important genes:

  gene name fitness t score description  
AMB_RS16025 -5.1 -4.3 MFS transporter compare
AMB_RS03045 -5.0 -1.5 hydrogen peroxide-inducible genes activator compare
AMB_RS17335 -4.9 -2.7 N-acyl-L-homoserine lactone synthetase compare
AMB_RS04280 -4.8 -16.1 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS19325 -4.7 -6.5 NAD(P)/FAD-dependent oxidoreductase compare
AMB_RS00695 -4.7 -1.6 gfo/Idh/MocA family oxidoreductase compare
AMB_RS21290 -4.7 -1.7 DUF4139 domain-containing protein compare
AMB_RS00820 -4.7 -2.6 GDP-L-fucose synthase compare
AMB_RS22450 -4.6 -4.4 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS10210 -4.5 -13.5 xanthine and CO dehydrogenase maturation factor compare
AMB_RS21005 -4.3 -1.3 hypothetical protein compare
AMB_RS10810 -4.3 -8.4 benzoyl-CoA reductase subunit A compare
AMB_RS11640 -4.3 -2.4 UbiX family flavin prenyltransferase compare
AMB_RS17235 -4.2 -1.5 AsmA family protein compare
AMB_RS02725 -4.1 -1.5 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS22280 -4.1 -11.6 hypothetical protein compare
AMB_RS17625 -4.1 -12.7 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS10205 -4.1 -7.9 4-hydroxybenzoyl-CoA reductase subunit beta compare
AMB_RS16080 -4.0 -1.6 tRNA-Glu compare
AMB_RS15610 -4.0 -8.2 hypothetical protein compare
AMB_RS14495 -4.0 -8.1 aminotransferase class V-fold PLP-dependent enzyme compare
AMB_RS10195 -4.0 -7.1 4-hydroxybenzoyl-CoA reductase subunit gamma compare
AMB_RS21535 -3.9 -1.2 cyclic nucleotide-binding domain-containing protein compare
AMB_RS22800 -3.9 -2.3 glutathione synthase compare
AMB_RS10820 -3.9 -18.2 benzoyl-CoA reductase subunit C compare
AMB_RS12385 -3.9 -3.9 alanine--glyoxylate aminotransferase family protein compare
AMB_RS24240 -3.8 -1.2 hypothetical protein compare
AMB_RS17350 -3.8 -3.3 rubrerythrin compare
AMB_RS05435 -3.8 -3.2 ABC transporter permease compare
AMB_RS20350 -3.7 -12.2 aspartate 1-decarboxylase compare
AMB_RS16130 -3.7 -3.6 phosphoglycerate dehydrogenase compare
AMB_RS06370 -3.6 -2.6 DNA-binding response regulator compare
AMB_RS03060 -3.6 -1.4 peptidoglycan editing factor PgeF compare
AMB_RS21435 -3.5 -17.0 methylmalonyl-CoA mutase compare
AMB_RS16100 -3.5 -3.7 RNA polymerase sigma factor RpoH compare
AMB_RS01190 -3.5 -5.3 UbiD family decarboxylase compare
AMB_RS01605 -3.5 -1.2 aspartate aminotransferase family protein compare
AMB_RS14035 -3.4 -6.1 endopeptidase La compare
AMB_RS10120 -3.3 -5.3 DUF1476 domain-containing protein compare
AMB_RS23155 -3.3 -1.0 two-component sensor histidine kinase compare
AMB_RS10815 -3.3 -10.9 benzoyl-CoA reductase subunit B compare
AMB_RS07660 -3.3 -1.2 hypothetical protein compare
AMB_RS05510 -3.3 -6.6 glycosyltransferase compare
AMB_RS00960 -3.2 -6.6 DNA-binding response regulator compare
AMB_RS00075 -3.2 -1.3 P-II family nitrogen regulator compare
AMB_RS00965 -3.2 -2.0 membrane protein compare
AMB_RS23195 -3.1 -4.3 ABC transporter ATP-binding protein compare
AMB_RS24350 -3.1 -1.2 hypothetical protein compare
AMB_RS01330 -3.1 -4.5 glycosyltransferase family 39 protein compare
AMB_RS21385 -3.0 -5.4 helix-turn-helix transcriptional regulator compare
AMB_RS07010 -3.0 -7.8 ATP-dependent helicase compare
AMB_RS00010 -3.0 -1.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS24545 -2.9 -0.9 hypothetical protein compare
AMB_RS17945 -2.9 -1.3 hypothetical protein compare
AMB_RS10200 -2.9 -9.8 4-hydroxybenzoyl-CoA reductase subunit alpha compare
AMB_RS11195 -2.9 -0.7 sulfate adenylyltransferase subunit 2 compare
AMB_RS22235 -2.9 -1.8 RNase adaptor protein RapZ compare
AMB_RS23095 -2.9 -7.6 class I SAM-dependent methyltransferase compare
AMB_RS21280 -2.9 -2.2 TVP38/TMEM64 family protein compare
AMB_RS05910 -2.8 -0.9 hypothetical protein compare
AMB_RS05500 -2.8 -7.9 GDP-mannose 4,6 dehydratase compare
AMB_RS05505 -2.8 -5.2 GDP-mannose 4,6-dehydratase compare
AMB_RS12785 -2.7 -3.7 murein transglycosylase compare
AMB_RS22565 -2.6 -10.1 MucR family transcriptional regulator compare
AMB_RS07745 -2.6 -2.3 disulfide bond formation protein B compare
AMB_RS10805 -2.6 -6.7 benzoyl-CoA reductase subunit D compare
AMB_RS00455 -2.6 -6.7 KR domain-containing protein compare
AMB_RS20145 -2.6 -0.9 chromosome segregation ATPase compare
AMB_RS22315 -2.6 -1.8 membrane protein compare
AMB_RS24000 -2.6 -2.0 glycosyltransferase family 1 protein compare
AMB_RS12590 -2.6 -8.3 tetratricopeptide repeat protein compare
AMB_RS02835 -2.6 -2.2 two-component sensor histidine kinase compare
AMB_RS15295 -2.5 -1.8 iron donor protein CyaY compare
AMB_RS14505 -2.5 -3.8 carbon monoxide dehydrogenase compare
AMB_RS03110 -2.5 -1.8 membrane protein compare
AMB_RS23205 -2.5 -7.9 glycosyl transferase compare
AMB_RS14175 -2.5 -1.9 COQ9 family protein compare
AMB_RS00120 -2.5 -3.6 YggS family pyridoxal phosphate-dependent enzyme compare
AMB_RS20195 -2.5 -0.7 iron transporter MagA compare
AMB_RS19880 -2.5 -2.9 site-specific tyrosine recombinase XerD compare
AMB_RS11360 -2.4 -6.2 membrane protein compare
AMB_RS00970 -2.4 -8.6 DUF1924 domain-containing protein compare
AMB_RS17365 -2.4 -9.6 acriflavine resistance protein B compare
AMB_RS19340 -2.4 -0.6 EamA family transporter compare
AMB_RS04630 -2.4 -0.4 tRNA-Met compare
AMB_RS14620 -2.3 -2.0 ArsR family transcriptional regulator compare
AMB_RS05220 -2.3 -0.6 hypothetical protein compare
AMB_RS20665 -2.3 -0.8 class I SAM-dependent methyltransferase compare
AMB_RS22575 -2.3 -12.0 GNAT family N-acetyltransferase compare
AMB_RS22490 -2.3 -1.9 YdcF family protein compare
AMB_RS09295 -2.3 -1.4 carboxymuconolactone decarboxylase family protein compare
AMB_RS00015 -2.3 -2.9 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
AMB_RS23210 -2.3 -9.3 glycosyl transferase compare
AMB_RS20180 -2.3 -0.7 hypothetical protein compare
AMB_RS13145 -2.3 -2.9 positive regulator of sigma E activity compare
AMB_RS13515 -2.2 -1.1 nitrate reductase cytochrome c-type subunit compare
AMB_RS01265 -2.2 -0.8 LysR family transcriptional regulator compare
AMB_RS00355 -2.2 -4.6 radical SAM protein compare
AMB_RS18590 -2.2 -1.8 glycosyltransferase family 2 protein compare
AMB_RS14855 -2.2 -1.8 molybdate ABC transporter substrate-binding protein compare
AMB_RS24680 -2.2 -1.4 hypothetical protein compare
AMB_RS03230 -2.1 -1.8 hypothetical protein compare
AMB_RS20120 -2.1 -1.5 VOC family protein compare
AMB_RS18145 -2.1 -3.6 GntR family transcriptional regulator compare
AMB_RS03205 -2.1 -1.6 DNA recombination/repair protein RecA compare
AMB_RS07075 -2.1 -8.5 cytochrome c-552 precursor compare
AMB_RS07700 -2.1 -0.8 hypothetical protein compare
AMB_RS19860 -2.1 -7.3 HlyC/CorC family transporter compare
AMB_RS11820 -2.1 -2.8 transcriptional regulator NrdR compare
AMB_RS03610 -2.0 -7.9 transcription elongation factor GreA compare
AMB_RS01815 -2.0 -1.0 hypothetical protein compare
AMB_RS18100 -2.0 -2.6 DUF2249 domain-containing protein compare
AMB_RS02610 -2.0 -0.6 hypothetical protein compare
AMB_RS00180 -2.0 -6.1 hypothetical protein compare
AMB_RS00920 -2.0 -7.1 secretion protein HlyD compare
AMB_RS12600 -2.0 -0.8 amino acid-binding protein compare
AMB_RS01830 -1.9 -0.3 hypothetical protein compare
AMB_RS14565 -1.9 -2.3 sensor histidine kinase compare
AMB_RS21455 -1.9 -4.3 XRE family transcriptional regulator compare
AMB_RS02500 -1.9 -1.3 hypothetical protein compare
AMB_RS10830 -1.9 -5.9 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase compare
AMB_RS17450 -1.9 -0.6 DUF1987 domain-containing protein compare
AMB_RS02525 -1.9 -6.7 U32 family peptidase compare
AMB_RS01540 -1.9 -1.1 peptidase M23 compare
AMB_RS13510 -1.9 -3.6 cytochrome C protein NapC compare
AMB_RS12920 -1.8 -3.6 exo-beta-1,3-glucanase compare
AMB_RS02530 -1.8 -8.2 U32 family peptidase compare
AMB_RS03780 -1.8 -0.6 hypothetical protein compare
AMB_RS21750 -1.8 -1.1 DNA-binding response regulator compare
AMB_RS22580 -1.8 -7.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS13180 -1.8 -2.3 protein rnfH compare
AMB_RS23935 -1.8 -2.2 hypothetical protein compare
AMB_RS02880 -1.8 -1.6 hypothetical protein compare
AMB_RS06785 -1.8 -0.9 hypothetical protein compare
AMB_RS03725 -1.7 -3.7 DNA helicase II compare
AMB_RS04885 -1.7 -1.1 hypothetical protein compare
AMB_RS17550 -1.7 -6.0 2-isopropylmalate synthase compare
AMB_RS14810 -1.7 -8.5 VWA domain-containing protein compare
AMB_RS07735 -1.7 -1.0 histidine phosphatase family protein compare
AMB_RS17370 -1.7 -8.1 acriflavine resistance protein B compare
AMB_RS19790 -1.6 -2.4 NAD(P)-dependent oxidoreductase compare
AMB_RS01910 -1.6 -0.6 head decoration protein compare
AMB_RS19545 -1.6 -1.7 elongation factor 4 compare
AMB_RS12710 -1.6 -4.2 segregation/condensation protein A compare
AMB_RS11190 -1.6 -3.3 phosphoadenylyl-sulfate reductase compare
AMB_RS05405 -1.6 -0.9 4Fe-4S dicluster domain-containing protein compare
AMB_RS18110 -1.5 -1.9 cAMP-binding protein compare
AMB_RS07865 -1.5 -5.3 ATP-dependent chaperone ClpB compare
AMB_RS14815 -1.5 -4.2 CbbQ/NirQ/NorQ/GpvN family protein compare
AMB_RS12870 -1.5 -6.6 GNAT family N-acetyltransferase compare
AMB_RS11780 -1.5 -5.9 glutamate synthase subunit beta compare
AMB_RS11775 -1.5 -11.7 glutamate synthase large subunit compare
AMB_RS06630 -1.5 -2.9 hypothetical protein compare
AMB_RS00240 -1.5 -1.7 hypothetical protein compare
AMB_RS18010 -1.5 -10.0 sensor histidine kinase compare
AMB_RS04325 -1.5 -4.8 TetR/AcrR family transcriptional regulator compare
AMB_RS00045 -1.5 -4.5 thioredoxin compare
AMB_RS06005 -1.4 -1.4 hypothetical protein compare
AMB_RS00930 -1.4 -6.9 ABC transporter permease compare
AMB_RS15490 -1.4 -6.4 ABC transporter permease compare
AMB_RS22125 -1.4 -4.5 hypothetical protein compare
AMB_RS15540 -1.4 -5.3 SCO family protein compare
AMB_RS09120 -1.4 -1.7 ABC transporter ATP-binding protein compare
AMB_RS22480 -1.4 -0.6 cell division ATP-binding protein FtsE compare
AMB_RS08360 -1.4 -2.0 hypothetical protein compare
AMB_RS01655 -1.4 -0.5 hypothetical protein compare
AMB_RS00435 -1.4 -8.5 B12-binding domain-containing radical SAM protein compare
AMB_RS22005 -1.4 -0.8 HD domain-containing protein compare
AMB_RS06155 -1.3 -2.5 hypothetical protein compare
AMB_RS13155 -1.3 -1.8 electron transporter RnfB compare
AMB_RS01415 -1.3 -0.7 rhodanese-like domain-containing protein compare
AMB_RS19890 -1.3 -3.3 complex I NDUFA9 subunit family protein compare
AMB_RS24330 -1.3 -3.0 DNA-binding protein compare
AMB_RS17375 -1.3 -4.3 efflux RND transporter periplasmic adaptor subunit compare
AMB_RS12410 -1.3 -4.8 excinuclease ABC subunit UvrA compare
AMB_RS13585 -1.3 -2.4 alpha/beta hydrolase compare
AMB_RS16395 -1.3 -4.0 hypothetical protein compare
AMB_RS02695 -1.3 -1.0 undecaprenyl-diphosphatase 1 compare
AMB_RS00470 -1.3 -9.0 hypothetical protein compare
AMB_RS14190 -1.3 -3.4 cytochrome C biogenesis protein CcsA compare
AMB_RS01080 -1.3 -1.0 exodeoxyribonuclease VII large subunit compare
AMB_RS08155 -1.3 -0.8 DUF4115 domain-containing protein compare
AMB_RS07110 -1.3 -1.3 Lrp/AsnC family transcriptional regulator compare
AMB_RS15520 -1.3 -3.9 hypothetical protein compare
AMB_RS16715 -1.3 -1.6 hypothetical protein compare
AMB_RS20740 -1.3 -5.2 hypothetical protein compare
AMB_RS15620 -1.3 -4.3 RluA family pseudouridine synthase compare
AMB_RS08255 -1.2 -1.0 hypothetical protein compare
AMB_RS05930 -1.2 -2.5 hypothetical protein compare
AMB_RS20020 -1.2 -1.1 cell division protein ZapE compare
AMB_RS01325 -1.2 -1.8 phosphatase PAP2 family protein compare
AMB_RS04510 -1.2 -2.5 ferrous iron transporter compare
AMB_RS23865 -1.2 -1.7 DUF2786 domain-containing protein compare
AMB_RS22780 -1.2 -0.7 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
AMB_RS05495 -1.2 -6.6 hypothetical protein compare
AMB_RS21955 -1.2 -0.8 hypothetical protein compare
AMB_RS00925 -1.2 -5.9 ABC transporter ATP-binding protein compare
AMB_RS02715 -1.2 -2.6 glycerophosphodiester phosphodiesterase compare
AMB_RS09970 -1.2 -0.2 NAD synthetase compare
AMB_RS10870 -1.2 -2.1 KR domain-containing protein compare


Specific Phenotypes

For 4 genes in this experiment

For magnetic pulldown Iron in Magnetospirillum magneticum AMB-1

For magnetic pulldown Iron across organisms