| | gene | name | fitness | t score | description | |
|---|
| b3792 | wzxE | -3.6 | -4.9 | O-antigen translocase (NCBI) | compare |
| b4201 | priB | -3.3 | -3.2 | primosomal replication protein N (NCBI) | compare |
| b3021 | ygiT | -3.3 | -4.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1231 | tyrT | -3.3 | -2.1 | tRNA-Tyr (NCBI) | compare |
| b2567 | rnc | -3.0 | -2.8 | ribonuclease III (NCBI) | compare |
| b2576 | srmB | -2.6 | -3.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b3390 | aroK | -2.5 | -2.3 | shikimate kinase I (NCBI) | compare |
| b3341 | rpsG | -2.4 | -1.6 | 30S ribosomal protein S7 (NCBI) | compare |
| b0920 | ycbC | -2.1 | -4.5 | conserved inner membrane protein (NCBI) | compare |
| b3229 | sspA | -2.1 | -4.2 | stringent starvation protein A (NCBI) | compare |
| b3205 | yhbJ | -2.1 | -3.6 | hypothetical protein (NCBI) | compare |
| b0630 | lipB | -2.1 | -2.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0232 | yafN | -2.0 | -1.3 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3962 | udhA | -1.9 | -8.5 | putative oxidoreductase (VIMSS) | compare |
| b1567 | intK | -1.9 | -2.4 | Qin prophage; predicted protein (RefSeq) | compare |
| b2498 | upp | -1.8 | -3.3 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b2699 | recA | -1.8 | -2.0 | recombinase A (NCBI) | compare |
| b0118 | acnB | -1.8 | -3.2 | aconitate hydratase (NCBI) | compare |
| b3121 | yhaC | -1.7 | -2.6 | hypothetical protein (NCBI) | compare |
| b4585 | sroB | -1.7 | -1.4 | Novel sRNA, function unknown (RefSeq) | compare |
| b0114 | aceE | -1.7 | -1.1 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b2528 | iscA | -1.6 | -1.8 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1358 | ydaT | -1.6 | -2.0 | Rac prophage; predicted protein (NCBI) | compare |
| b0049 | apaH | -1.6 | -4.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b3082 | ygjM | -1.5 | -2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3725 | pstB | -1.5 | -2.4 | phosphate transporter subunit (NCBI) | compare |
| b1863 | ruvC | -1.5 | -3.3 | Holliday junction resolvase (NCBI) | compare |
| b3398 | yrfF | -1.5 | -3.2 | predicted inner membrane protein (NCBI) | compare |
| b0560 | nohB | -1.5 | -2.0 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1252 | tonB | -1.5 | -2.5 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2894 | xerD | -1.4 | -1.6 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4699 | fnrS | -1.4 | -1.4 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b4202 | rpsR | -1.4 | -2.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b3871 | bipA | -1.4 | -7.5 | GTP-binding protein (NCBI) | compare |
| b2569 | lepA | -1.3 | -3.5 | GTP-binding protein LepA (NCBI) | compare |
| b2297 | pta | -1.3 | -1.8 | phosphate acetyltransferase (NCBI) | compare |
| b3290 | trkA | -1.3 | -2.7 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0082 | mraW | -1.3 | -3.0 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3183 | obgE | -1.3 | -1.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3149 | yraO | -1.3 | -4.5 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b4177 | purA | -1.3 | -2.2 | adenylosuccinate synthetase (NCBI) | compare |
| b0890 | ftsK | -1.3 | -5.3 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0053 | surA | -1.3 | -3.5 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2784 | relA | -1.3 | -6.2 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0051 | ksgA | -1.2 | -4.3 | dimethyladenosine transferase (NCBI) | compare |
| b3204 | ptsN | -1.2 | -4.1 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2625 | yfjI | -1.2 | -4.8 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b0200 | gmhB | -1.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b3198 | kdsC | -1.2 | -2.2 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b4503 | yafF | -1.2 | -1.5 | no description | compare |
| b1642 | slyA | -1.2 | -1.6 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b3636 | rpmG | -1.2 | -1.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b2518 | ndk | -1.2 | -2.0 | nucleoside diphosphate kinase (NCBI) | compare |
| b3162 | deaD | -1.2 | -3.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b4453 | ldrD | -1.2 | -1.8 | toxic polypeptide, small (NCBI) | compare |
| b2282 | nuoH | -1.2 | -2.3 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1730 | ydjO | -1.1 | -2.6 | predicted protein (RefSeq) | compare |
| b2288 | nuoA | -1.1 | -2.5 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3609 | secB | -1.1 | -3.3 | export protein SecB (NCBI) | compare |
| b3442 | yhhZ | -1.1 | -2.2 | hypothetical protein (NCBI) | compare |
| b3619 | rfaD | -1.1 | -2.6 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3463 | ftsE | -1.1 | -3.2 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1257 | yciE | -1.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b2650 | ypjC | -1.1 | -1.9 | hypothetical protein (RefSeq) | compare |
| b3649 | rpoZ | -1.1 | -2.2 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4613 | dinQ | -1.1 | -1.5 | Damage inducible, function unknown (RefSeq) | compare |
| b1363 | trkG | -1.1 | -3.4 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b2277 | nuoM | -1.0 | -3.9 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0953 | rmf | -1.0 | -1.9 | ribosome modulation factor (NCBI) | compare |
| b2822 | recC | -1.0 | -3.3 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2820 | recB | -1.0 | -2.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3839 | tatC | -1.0 | -5.7 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2110 | yehC | -1.0 | -2.5 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0605 | ahpC | -1.0 | -3.8 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2363 | yfdT | -1.0 | -1.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2948 | yqgE | -1.0 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1499 | ydeO | -1.0 | -1.8 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b4647 | mokA | -1.0 | -1.2 | no description | compare |
| b1013 | ycdC | -1.0 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1084 | rne | -1.0 | -3.0 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b4685 | yrbN | -1.0 | -1.9 | expressed protein (RefSeq) | compare |
| b1286 | rnb | -1.0 | -2.3 | exoribonuclease II (NCBI) | compare |
| b1088 | yceD | -0.9 | -2.5 | hypothetical protein (NCBI) | compare |
| b2824 | ygdB | -0.9 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3250 | mreC | -0.9 | -1.4 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1493 | gadB | -0.9 | -1.5 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b4505 | insX | -0.9 | -1.1 | predicted IS protein (RefSeq) | compare |
| b0028 | fkpB | -0.9 | -2.6 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b1438 | ydcQ | -0.9 | -1.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3778 | rep | -0.9 | -4.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2007 | yeeX | -0.9 | -2.1 | conserved protein (RefSeq) | compare |
| b1236 | galU | -0.9 | -3.1 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2285 | nuoE | -0.9 | -1.4 | NADH dehydrogenase subunit E (NCBI) | compare |
| b4255 | yjgD | -0.9 | -2.7 | hypothetical protein (NCBI) | compare |
| b3650 | spoT | -0.9 | -3.9 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b2456 | cchB | -0.9 | -2.6 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b3163 | nlpI | -0.9 | -2.9 | hypothetical protein (NCBI) | compare |
| b1623 | add | -0.9 | -2.5 | adenosine deaminase (NCBI) | compare |
| b2635 | ypjK | -0.9 | -1.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2276 | nuoN | -0.9 | -3.0 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0957 | ompA | -0.9 | -2.4 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b4128 | yjdK | -0.9 | -3.0 | hypothetical protein (NCBI) | compare |
| b3621 | rfaC | -0.9 | -3.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0437 | clpP | -0.9 | -4.0 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2340 | sixA | -0.9 | -2.5 | phosphohistidine phosphatase (NCBI) | compare |
| b3816 | corA | -0.9 | -4.2 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0726 | sucA | -0.9 | -2.2 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0741 | pal | -0.9 | -2.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1120 | cobB | -0.9 | -2.7 | deacetylase of acs and cheY, regulates chemotaxis (NCBI) | compare |
| b1446 | ydcY | -0.8 | -1.1 | hypothetical protein (NCBI) | compare |
| b4246 | pyrL | -0.8 | -1.6 | pyrBI operon leader peptide (NCBI) | compare |
| b1551 | b1551 | -0.8 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3617 | kbl | -0.8 | -3.9 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b1290 | sapF | -0.8 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3616 | tdh | -0.8 | -3.2 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b4172 | hfq | -0.8 | -1.3 | RNA-binding protein Hfq (NCBI) | compare |
| b4571 | wbbL | -0.8 | -2.2 | no description | compare |
| b2280 | nuoJ | -0.8 | -2.8 | NADH dehydrogenase subunit J (NCBI) | compare |
| b0784 | moaD | -0.8 | -1.8 | molybdopterin synthase, small subunit (NCBI) | compare |
| b1709 | btuD | -0.8 | -0.8 | vitamin B12-transporter ATPase (NCBI) | compare |
| b2279 | nuoK | -0.8 | -1.4 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1361 | ydaW | -0.8 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0850 | ybjC | -0.8 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b2330 | yfcB | -0.8 | -1.4 | putative adenine-specific methylase (VIMSS) | compare |
| b1390 | paaC | -0.8 | -2.0 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b1434 | ydcN | -0.8 | -1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0149 | mrcB | -0.8 | -5.3 | penicillin-binding protein 1b (NCBI) | compare |
| b2143 | cdd | -0.8 | -2.5 | cytidine deaminase (NCBI) | compare |
| b4497 | yeeL | -0.8 | -3.2 | no description | compare |
| b2479 | gcvR | -0.8 | -2.3 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3726 | pstA | -0.8 | -3.3 | phosphate transporter subunit (NCBI) | compare |
| b0226 | dinJ | -0.8 | -1.8 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b0222 | lpcA | -0.8 | -1.8 | phosphoheptose isomerase (NCBI) | compare |
| b3613 | yibP | -0.8 | -3.0 | putative membrane protein (VIMSS) | compare |
| b0617 | citD | -0.8 | -1.3 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b3493 | pitA | -0.8 | -4.0 | phosphate transporter, low-affinity (NCBI) | compare |
| b4383 | deoB | -0.7 | -3.8 | phosphopentomutase (NCBI) | compare |
| b3935 | priA | -0.7 | -1.4 | primosome assembly protein PriA (NCBI) | compare |
| b2287 | nuoB | -0.7 | -2.0 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0843 | ybjH | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b1085 | b1085 | -0.7 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0001 | thrL | -0.7 | -1.4 | thr operon leader peptide (NCBI) | compare |
| b3483 | yhhH | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1060 | yceP | -0.7 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1058 | yceO | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b0990 | cspG | -0.7 | -1.7 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3811 | xerC | -0.7 | -1.5 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0145 | dksA | -0.7 | -1.9 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2352 | yfdI | -0.7 | -2.0 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b1394 | paaG | -0.7 | -1.3 | enoyl-CoA hydratase (NCBI) | compare |
| b3239 | yhcO | -0.7 | -1.6 | predicted barnase inhibitor (NCBI) | compare |
| b0696 | kdpC | -0.7 | -1.4 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b2055 | wcaE | -0.7 | -1.5 | predicted glycosyl transferase (NCBI) | compare |
| b3620 | rfaF | -0.7 | -2.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3052 | rfaE | -0.7 | -2.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4493 | gapC | -0.7 | -1.1 | no description | compare |
| b1355 | b1355 | -0.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0603 | ybdO | -0.7 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4239 | treC | -0.7 | -2.5 | trehalose-6-P hydrolase (NCBI) | compare |
| b2743 | pcm | -0.7 | -1.6 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b0623 | cspE | -0.7 | -0.9 | cold shock protein E (NCBI) | compare |
| b4655 | ythA | -0.7 | -1.3 | expressed protein (RefSeq) | compare |
| b1527 | yneK | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b0938 | ycbQ | -0.7 | -3.7 | putative fimbrial-like protein (VIMSS) | compare |
| b4529 | ydbJ | -0.7 | -0.7 | hypothetical protein (NCBI) | compare |
| b0406 | tgt | -0.7 | -3.1 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b2283 | nuoG | -0.7 | -2.9 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2236 | yfaE | -0.7 | -1.2 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b0439 | lon | -0.7 | -2.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0895 | dmsB | -0.7 | -2.1 | dimethyl sulfoxide reductase, anaerobic, subunit B (NCBI) | compare |
| b1591 | b1591 | -0.7 | -1.1 | putative oxidoreductase component (VIMSS) | compare |
| b1841 | yobA | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b0092 | ddlB | -0.6 | -2.3 | D-alanylalanine synthetase (NCBI) | compare |
| b3741 | gidA | -0.6 | -3.2 | glucose-inhibited division protein A (NCBI) | compare |
| b3863 | polA | -0.6 | -0.8 | DNA polymerase I (NCBI) | compare |
| b1902 | yecI | -0.6 | -2.4 | predicted ferritin-like protein (NCBI) | compare |
| b2259 | pmrD | -0.6 | -1.0 | polymyxin resistance protein B (VIMSS) | compare |
| b1861 | ruvA | -0.6 | -1.1 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0080 | fruR | -0.6 | -2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0367 | tauC | -0.6 | -1.7 | taurine transporter subunit (NCBI) | compare |
| b2278 | nuoL | -0.6 | -3.5 | NADH dehydrogenase subunit L (NCBI) | compare |
| b3414 | gntY | -0.6 | -2.7 | predicted gluconate transport associated protein (NCBI) | compare |
| b4041 | plsB | -0.6 | -1.2 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b2329 | aroC | -0.6 | -2.2 | chorismate synthase (NCBI) | compare |
| b4191 | ulaR | -0.6 | -2.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3029 | ygiN | -0.6 | -1.3 | quinol monooxygenase (NCBI) | compare |
| b2597 | yfiA | -0.6 | -1.0 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b0610 | rnk | -0.6 | -1.3 | nucleoside diphosphate kinase regulator (NCBI) | compare |
| b1712 | ihfA | -0.6 | -1.4 | integration host factor subunit alpha (NCBI) | compare |
| b4375 | prfC | -0.6 | -2.9 | peptide chain release factor 3 (NCBI) | compare |
| b1379 | hslJ | -0.6 | -1.7 | heat-inducible protein (NCBI) | compare |
| b4253 | yjgL | -0.6 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1658 | purR | -0.6 | -2.6 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3658 | selC | -0.6 | -1.3 | tRNA-Sec (NCBI) | compare |
| b3842 | rfaH | -0.6 | -2.1 | transcriptional activator RfaH (NCBI) | compare |
| b1823 | cspC | -0.6 | -1.4 | stress protein, member of the CspA-family (NCBI) | compare |
| b4551 | yheV | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b2698 | recX | -0.6 | -1.0 | RecA regulator RecX (NCBI) | compare |
| b3469 | zntA | -0.6 | -4.0 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b3728 | pstS | -0.6 | -2.0 | phosphate transporter subunit (NCBI) | compare |