Experiment set2IT053 for Agrobacterium fabrum C58

Compare to:

D-Glucose-6-Phosphate sodium salt carbon source

200 most important genes:

  gene name fitness t score description  
Atu1140 -8.3 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu4782 -8.1 -5.6 two component response regulator compare
Atu1687 -7.8 -7.7 anthranilate phosphoribosyltransferase compare
Atu0432 -7.8 -5.4 O-succinylhomoserine sulfhydrylase compare
Atu0486 -7.5 -5.2 dihydroorotate dehydrogenase compare
Atu1205 -7.5 -7.3 threonine dehydratase compare
Atu2791 -7.3 -7.1 3-isopropylmalate dehydrogenase compare
Atu2289 -7.2 -13.8 anthranilate synthase component I and II compare
Atu2264 -7.1 -9.7 2-isopropylmalate synthase compare
Atu2726 -7.0 -18.2 pyruvate carboxylase compare
Atu0400 -7.0 -4.8 orotate phosphoribosyltransferase compare
Atu2709 -6.9 -16.2 3-isopropylmalate dehydratase, large subunit compare
Atu2650 -6.9 -12.4 glycerol-3-phosphate dehydrogenase compare
Atu0679 -6.9 -4.8 ATP phosphoribosyltransferase compare
Atu0038 -6.9 -6.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2036 -6.8 -12.3 acetolactate synthase III, large subunit compare
Atu1588 -6.8 -8.1 homoserine dehydrogenase compare
Atu2718 -6.7 -6.6 homoserine O-succinyltransferase compare
Atu0099 -6.7 -11.3 prephenate dehydratase compare
Atu3754 -6.7 -4.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1308 -6.6 -7.8 aspartate carbamoyl transferase catalytic subunit compare
Atu3706 -6.4 -7.6 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -6.4 -4.4 phosphoserine phosphatase compare
Atu3885 -6.3 -7.5 inositol monophosphatase compare
Atu2747 -6.3 -15.2 hypothetical protein compare
Atu1750 -6.2 -3.6 phosphoribosyl c-AMP cyclohydrolase compare
Atu1688 -6.2 -4.3 indole-3-glycerol-phosphate synthase compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu3783 -6.1 -18.8 glutamate synthase subunit beta compare
Atu1456 -6.0 -9.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0030 -5.9 -2.6 phosphocarrier protein HPr compare
Atu0298 -5.9 -8.1 orotidine 5 compare
Atu0017 -5.9 -4.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4781 -5.8 -16.8 two component sensor kinase compare
Atu3755 -5.7 -5.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0399 -5.7 -6.7 dihydroorotase compare
Atu4785 -5.6 -20.8 iron ABC transporter permease compare
Atu1844 -5.6 -5.5 Phosphoribosylformylglycinamidine synthetase compare
Atu3482 -5.6 -12.0 pantoate--beta-alanine ligase compare
Atu1075 -5.6 -8.5 amidophosphoribosyltransferase compare
Atu0537 -5.6 -6.6 histidinol dehydrogenase compare
Atu4784 -5.5 -12.5 ABC transporter substrate-binding protein compare
Atu1307 -5.5 -8.4 dihydroorotase compare
Atu1141 -5.5 -8.6 Phosphoribosylglycinamide synthetase compare
Atu0678 -5.5 -6.5 histidyl-tRNA synthetase compare
Atu2015 -5.5 -17.5 aminotransferase compare
Atu3784 -5.5 -29.2 glutamate synthase large subunit compare
Atu4786 -5.3 -9.6 iron ABC transporter ATPase compare
Atu1850 -5.3 -5.1 phosphoribosylformylglycinamidine synthetase II compare
Atu4783 -5.3 -12.8 ABC transporter substrate-binding protein compare
Atu2790 -5.2 -3.1 3-isopropylmalate dehydratase, small subunit compare
Atu3483 -5.1 -7.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1359 -5.0 -2.2 dnaK deletion suppressor protein compare
Atu0041 -4.9 -3.4 glutamine amidotransferase compare
Atu0039 -4.9 -3.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu1030 -4.8 -3.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3739 -4.8 -4.0 phosphoglycerate kinase compare
Atu0647 -4.7 -7.9 phosphoribosylamine--glycine ligase compare
Atu1454 -4.7 -8.5 siroheme synthase compare
Atu1686 -4.5 -18.7 peptidyl-prolyl cis-trans isomerse D compare
Atu0641 -4.4 -5.4 hypothetical protein compare
Atu1589 -4.4 -8.3 aminotransferase, class I compare
Atu3469 -4.1 -4.0 phosphoglyceromutase compare
Atu0029 -4.1 -7.5 S-adenosylhomocysteine hydrolase compare
Atu0043 -4.1 -3.9 imidazoleglycerol-phosphate dehydratase compare
Atu3999 -4.1 -4.4 dithiobiotin synthetase compare
Atu2548 -3.8 -17.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0792 -3.5 -7.4 hypothetical protein compare
Atu1455 -3.5 -5.2 hypothetical protein compare
Atu0876 -3.4 -2.9 superoxide dismutase compare
Atu1446 -3.4 -4.6 two component response regulator compare
Atu1463 -3.2 -8.4 glycine cleavage system component H compare
Atu1462 -3.2 -16.5 glycine cleavage system protein P2 compare
Atu2155 -3.2 -19.6 methionine synthase compare
Atu1845 -3.1 -2.7 phosphoribosylformylglycinamidine synthase I compare
Atu4096 -3.1 -13.3 nicotinate-nucleotide pyrophosphorylase compare
Atu0598 -3.1 -9.9 phosphogluconate dehydratase compare
Atu3731 -3.1 -11.4 5-formyltetrahydrofolate cyclo-ligase compare
Atu1464 -3.0 -7.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu4773 -3.0 -3.1 two component response regulator compare
Atu4098 -3.0 -14.8 quinolinate synthetase compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3997 -2.8 -15.4 biotin synthetase compare
Atu0723 -2.7 -2.6 FAD dependent oxidoreductase compare
Atu1604 -2.7 -17.0 poly-beta-hydroxybutyrate synthase compare
Atu1685 -2.7 -2.0 hypothetical protein compare
Atu2569 -2.4 -13.6 thiamine biosynthesis protein compare
Atu1457 -2.3 -2.5 hypothetical protein compare
Atu3290 -2.2 -13.1 phosphomethylpyrimidine kinase compare
Atu3998 -2.2 -10.9 8-amino-7-oxononanoate synthase compare
Atu3288 -2.2 -7.5 hydroxyethylthiazole kinase compare
Atu4097 -2.1 -9.9 L-aspartate oxidase compare
Atu3289 -2.1 -4.5 thiamine-phosphate pyrophosphorylase compare
Atu0322 -2.1 -9.3 enoyl CoA hydratase compare
Atu0346 -2.1 -5.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4001 -2.1 -7.5 3-oxoacyl-ACP synthase compare
Atu4000 -2.1 -13.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu1748 -2.0 -8.5 NIFU-like protein compare
Atu2205 -1.9 -8.4 transcriptional regulator, MarR family compare
Atu0769 -1.8 -2.3 protoheme IX farnesyltransferase compare
Atu2209 -1.8 -6.0 pyrroline-5-carboxylate reductase compare
Atu2125 -1.7 -2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu5513 -1.7 -2.3 cold shock protein compare
Atu8115 -1.7 -4.4 Hypothetical Protein compare
Atu0354 -1.6 -2.8 ferric uptake regulator compare
Atu2127 -1.6 -8.0 L-carnitine dehydratase compare
Atu2808 -1.6 -6.3 cobyric acid synthase compare
Atu2684 -1.6 -2.0 hypothetical protein compare
Atu5142 -1.6 -2.5 hypothetical protein compare
Atu1572 -1.5 -7.3 hydrolase compare
Atu2770 -1.5 -5.6 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2800 -1.5 -5.1 precorrin-3B C17-methyltransferase compare
Atu1891 -1.5 -4.3 cobalamin biosynthesis protein compare
Atu1542 -1.5 -6.2 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0031 -1.5 -1.9 PTS system, IIA component compare
Atu2805 -1.4 -5.4 cobalamin synthesis protein compare
Atu3908 -1.4 -8.5 GntR family transcriptional regulator compare
Atu2796 -1.4 -6.2 precorrin-4 C11-methyltransferase compare
Atu0188 -1.4 -3.0 ABC transporter, membrane spanning protein (peptide) compare
Atu2799 -1.4 -5.1 precorrin-6x reductase compare
Atu2807 -1.4 -6.0 cob(I)alamin adenosyltransferase compare
Atu2793 -1.3 -4.4 cobyrinic acid a,c-diamide synthase compare
Atu4173 -1.3 -3.2 phosphoenolpyruvate-protein phosphotransferase compare
Atu8088 -1.3 -2.6 hypothetical protein compare
Atu2020 -1.2 -2.9 transcriptional regulator, TetR family compare
Atu0434 -1.2 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2804 -1.2 -7.3 cobaltochelatase subunit compare
Atu2809 -1.2 -6.9 cobalamin biosynthesis protein compare
Atu2802 -1.2 -5.9 precorrin-8X methylmutase compare
Atu0535 -1.2 -4.0 hypothetical protein compare
Atu2795 -1.2 -5.0 cobalamin biosynthetic protein compare
Atu0291 -1.1 -6.1 hypothetical protein compare
Atu6098 -1.1 -0.8 transcriptional regulator, HTH family compare
Atu2803 -1.1 -3.5 Cobalamin biosynthesis associated protein compare
Atu1774 -1.1 -4.7 ABC transporter, substrate binding protein (peptide) compare
Atu1445 -1.1 -4.6 two component sensor kinase compare
Atu6114 -1.1 -1.7 hypothetical protein compare
Atu4317 -1.1 -2.6 TetR family transcriptional regulator compare
Atu1364 -1.0 -4.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0677 -1.0 -1.3 hypothetical protein compare
Atu4711 -1.0 -4.6 two component sensor kinase compare
Atu3219 -1.0 -7.4 dihydroxy-acid dehydratase compare
Atu2123 -1.0 -3.7 methylenetetrahydrofolate reductase compare
Atu0977 -1.0 -2.6 serine protease DO-like protease compare
Atu2801 -0.9 -2.8 precorrin-2 C20 methyltransferase compare
Atu0842 -0.9 -1.7 hypothetical protein compare
Atu1760 -0.9 -1.4 hypothetical protein compare
Atu1339 -0.9 -2.6 ribonuclease E compare
Atu3598 -0.9 -2.2 thiol:disulfide interchange protein compare
Atu2555 -0.9 -3.9 L-lysine 2,3-aminomutase compare
Atu4346 -0.9 -3.8 hypothetical protein compare
Atu2376 -0.9 -0.7 hypothetical protein compare
Atu1770 -0.9 -6.0 glutamine synthetase compare
Atu2193 -0.9 -1.0 hypothetical protein compare
Atu3468 -0.9 -1.0 hypothetical protein compare
Atu0846 -0.9 -2.8 transcriptional regulator, MarR family compare
Atu0361 -0.8 -2.2 transcriptional regulator compare
Atu0659 -0.8 -3.2 NTP pyrophosphohydrolase, MutT family compare
Atu1620 -0.8 -5.9 triosephosphate isomerase compare
Atu0503 -0.8 -6.8 enoyl-CoA hydratase compare
Atu0501 -0.8 -6.1 acyl-CoA dehydrogenase compare
Atu2797 -0.8 -1.3 cobalamin biosynthesis protein compare
Atu0184 -0.8 -2.5 glucokinase compare
Atu0331 -0.8 -2.5 sigma-54 modulation protein compare
Atu2207 -0.8 -2.2 two component sensor kinase compare
Atu3727 -0.8 -2.2 hypothetical protein compare
Atu8191 -0.8 -1.5 hypothetical protein compare
Atu0062 -0.8 -4.6 transcriptional regulator, ROK family compare
Atu3627 -0.8 -1.6 hypothetical protein compare
Atu3162 -0.8 -4.9 LacI family transcriptional regulator compare
Atu2810 -0.8 -5.5 cobalamin biosynthetic protein compare
Atu2634 -0.8 -1.6 hypothetical protein compare
Atu0422 -0.8 -1.3 ABC transporter, membrane spanning protein compare
Atu1805 -0.8 -3.4 hypothetical protein compare
Atu0895 -0.7 -2.0 ABC transporter, substrate binding protein compare
Atu1254 -0.7 -1.4 transcriptional regulator, ArsR family compare
Atu0784 -0.7 -2.4 hypothetical protein compare
Atu3518 -0.7 -4.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu0502 -0.7 -3.1 acetyl-CoA acetyltransferase compare
Atu0332 -0.7 -4.6 RNA polymerase sigma-54 factor compare
Atu1847 -0.7 -1.8 hypothetical protein compare
Atu3485 -0.7 -4.8 short chain dehydrogenase compare
Atu0401 -0.7 -4.3 fructokinase compare
Atu3505 -0.7 -4.7 3-hydroxyisobutyryl-CoA hydrolase compare
Atu1518 -0.7 -2.3 transcriptional regulator, Fur family compare
Atu2798 -0.7 -2.2 precorrin-6y methyltransferase compare
Atu3183 -0.7 -0.8 hypothetical protein compare
Atu2740 -0.7 -4.0 transcriptional regulator, GntR family compare
Atu2439 -0.7 -0.8 hypothetical protein compare
Atu1286 -0.7 -2.0 hypothetical protein compare
Atu0816 -0.7 -5.2 sulfate adenylate transferase, subunit 1 compare
Atu2432 -0.7 -1.4 hypothetical protein compare
Atu0981 -0.7 -4.7 glutamate-ammonia-ligase adenylyltransferase compare
Atu2239 -0.6 -2.4 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2484 -0.6 -1.5 hypothetical protein compare
Atu3750 -0.6 -1.6 thiamine-phosphate pyrophosphorylase compare
Atu4072 -0.6 -1.2 nodulation protein N compare
Atu3336 -0.6 -2.8 hypothetical protein compare
Atu0818 -0.6 -3.7 phosphoadenosine phosphosulfate reductase compare
Atu1902 -0.6 -2.4 transketolase compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source D-Glucose-6-Phosphate sodium salt in Agrobacterium fabrum C58

For carbon source D-Glucose-6-Phosphate sodium salt across organisms