Experiment set2IT052 for Magnetospirillum magneticum AMB-1

Compare to:

30_an_nonmag_1

200 most important genes:

  gene name fitness t score description  
AMB_RS02985 -6.6 -0.9 UTP--glucose-1-phosphate uridylyltransferase compare
AMB_RS06785 -5.3 -0.7 hypothetical protein compare
AMB_RS17335 -5.0 -1.4 N-acyl-L-homoserine lactone synthetase compare
AMB_RS22280 -5.0 -9.9 hypothetical protein compare
AMB_RS14565 -4.8 -1.6 sensor histidine kinase compare
AMB_RS03045 -4.6 -1.0 hydrogen peroxide-inducible genes activator compare
AMB_RS24000 -4.5 -1.7 glycosyltransferase family 1 protein compare
AMB_RS19880 -4.4 -1.9 site-specific tyrosine recombinase XerD compare
AMB_RS17755 -4.4 -1.0 TIGR02453 family protein compare
AMB_RS00695 -4.3 -1.1 gfo/Idh/MocA family oxidoreductase compare
AMB_RS00820 -4.3 -1.7 GDP-L-fucose synthase compare
AMB_RS23915 -4.3 -0.9 XRE family transcriptional regulator compare
AMB_RS21290 -4.2 -1.1 DUF4139 domain-containing protein compare
AMB_RS00075 -4.2 -0.9 P-II family nitrogen regulator compare
AMB_RS21345 -4.2 -0.9 DUF1501 domain-containing protein compare
AMB_RS17350 -4.2 -1.7 rubrerythrin compare
AMB_RS06045 -4.1 -0.7 hypothetical protein compare
AMB_RS06005 -4.0 -1.0 hypothetical protein compare
AMB_RS19790 -3.9 -1.9 NAD(P)-dependent oxidoreductase compare
AMB_RS21005 -3.9 -0.9 hypothetical protein compare
AMB_RS19545 -3.9 -1.1 elongation factor 4 compare
AMB_RS02550 -3.8 -1.1 DNA polymerase III compare
AMB_RS03205 -3.8 -1.1 DNA recombination/repair protein RecA compare
AMB_RS02725 -3.8 -1.0 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS05435 -3.6 -1.3 ABC transporter permease compare
AMB_RS01190 -3.6 -2.5 UbiD family decarboxylase compare
AMB_RS14430 -3.5 -0.7 LexA repressor compare
AMB_RS21535 -3.5 -0.8 cyclic nucleotide-binding domain-containing protein compare
AMB_RS12185 -3.5 -0.9 hypothetical protein compare
AMB_RS00010 -3.5 -0.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS22800 -3.5 -1.5 glutathione synthase compare
AMB_RS00120 -3.5 -2.6 YggS family pyridoxal phosphate-dependent enzyme compare
AMB_RS17540 -3.4 -0.8 potassium transporter KefB compare
AMB_RS08330 -3.4 -1.1 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS24240 -3.4 -0.7 hypothetical protein compare
AMB_RS07010 -3.3 -7.1 ATP-dependent helicase compare
AMB_RS00965 -3.3 -1.0 membrane protein compare
AMB_RS05105 -3.3 -1.0 PAS domain S-box protein compare
AMB_RS20350 -3.3 -9.8 aspartate 1-decarboxylase compare
AMB_RS22010 -3.2 -0.7 hypothetical protein compare
AMB_RS18505 -3.2 -0.8 hypothetical protein compare
AMB_RS03060 -3.2 -0.9 peptidoglycan editing factor PgeF compare
AMB_RS14175 -3.2 -1.3 COQ9 family protein compare
AMB_RS12960 -3.2 -0.7 methylmalonyl-CoA epimerase compare
AMB_RS01605 -3.1 -0.8 aspartate aminotransferase family protein compare
AMB_RS16455 -3.1 -0.9 hypothetical protein compare
AMB_RS10205 -3.1 -13.0 4-hydroxybenzoyl-CoA reductase subunit beta compare
AMB_RS15295 -3.1 -1.0 iron donor protein CyaY compare
AMB_RS04280 -3.0 -9.6 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS23155 -2.9 -0.6 two-component sensor histidine kinase compare
AMB_RS03010 -2.9 -1.0 hypothetical protein compare
AMB_RS14855 -2.9 -1.0 molybdate ABC transporter substrate-binding protein compare
AMB_RS06630 -2.8 -4.0 hypothetical protein compare
AMB_RS07660 -2.8 -0.7 hypothetical protein compare
AMB_RS14815 -2.8 -4.0 CbbQ/NirQ/NorQ/GpvN family protein compare
AMB_RS21495 -2.8 -0.5 DUF484 domain-containing protein compare
AMB_RS15550 -2.8 -3.9 copper chaperone PCu(A)C compare
AMB_RS01330 -2.8 -2.5 glycosyltransferase family 39 protein compare
AMB_RS11195 -2.7 -0.5 sulfate adenylyltransferase subunit 2 compare
AMB_RS13510 -2.7 -3.1 cytochrome C protein NapC compare
AMB_RS14035 -2.7 -5.0 endopeptidase La compare
AMB_RS24350 -2.7 -0.8 hypothetical protein compare
AMB_RS21665 -2.6 -0.6 hypothetical protein compare
AMB_RS01080 -2.6 -0.9 exodeoxyribonuclease VII large subunit compare
AMB_RS11640 -2.5 -3.0 UbiX family flavin prenyltransferase compare
AMB_RS17235 -2.5 -1.0 AsmA family protein compare
AMB_RS22480 -2.5 -0.5 cell division ATP-binding protein FtsE compare
AMB_RS14620 -2.5 -0.9 ArsR family transcriptional regulator compare
AMB_RS06435 -2.5 -2.5 glycosyltransferase compare
AMB_RS05835 -2.5 -1.8 hypothetical protein compare
AMB_RS17945 -2.5 -0.8 hypothetical protein compare
AMB_RS21280 -2.5 -1.5 TVP38/TMEM64 family protein compare
AMB_RS24545 -2.5 -0.5 hypothetical protein compare
AMB_RS14495 -2.5 -4.7 aminotransferase class V-fold PLP-dependent enzyme compare
AMB_RS21750 -2.4 -0.5 DNA-binding response regulator compare
AMB_RS05910 -2.4 -0.5 hypothetical protein compare
AMB_RS01815 -2.4 -0.7 hypothetical protein compare
AMB_RS13170 -2.4 -0.4 electron transport complex subunit RsxG compare
AMB_RS14505 -2.4 -2.2 carbon monoxide dehydrogenase compare
AMB_RS03725 -2.4 -3.7 DNA helicase II compare
AMB_RS10120 -2.4 -3.6 DUF1476 domain-containing protein compare
AMB_RS12385 -2.4 -3.1 alanine--glyoxylate aminotransferase family protein compare
AMB_RS00990 -2.4 -0.8 hypothetical protein compare
AMB_RS21185 -2.3 -1.7 GntR family transcriptional regulator compare
AMB_RS19845 -2.3 -0.8 hypothetical protein compare
AMB_RS04510 -2.3 -3.0 ferrous iron transporter compare
AMB_RS19340 -2.3 -0.4 EamA family transporter compare
AMB_RS19160 -2.3 -2.3 methyltransferase domain-containing protein compare
AMB_RS04630 -2.3 -0.3 tRNA-Met compare
AMB_RS17550 -2.3 -6.0 2-isopropylmalate synthase compare
AMB_RS04215 -2.2 -1.7 bacterioferritin compare
AMB_RS07110 -2.2 -1.2 Lrp/AsnC family transcriptional regulator compare
AMB_RS12590 -2.2 -5.9 tetratricopeptide repeat protein compare
AMB_RS19325 -2.2 -8.0 NAD(P)/FAD-dependent oxidoreductase compare
AMB_RS12980 -2.2 -1.4 membrane protein compare
AMB_RS20145 -2.2 -0.6 chromosome segregation ATPase compare
AMB_RS13325 -2.2 -1.8 response regulator compare
AMB_RS05220 -2.2 -0.4 hypothetical protein compare
AMB_RS10200 -2.2 -8.9 4-hydroxybenzoyl-CoA reductase subunit alpha compare
AMB_RS22315 -2.2 -1.2 membrane protein compare
AMB_RS11190 -2.2 -2.4 phosphoadenylyl-sulfate reductase compare
AMB_RS23210 -2.2 -8.8 glycosyl transferase compare
AMB_RS05510 -2.1 -6.1 glycosyltransferase compare
AMB_RS12785 -2.1 -2.3 murein transglycosylase compare
AMB_RS02525 -2.1 -5.2 U32 family peptidase compare
AMB_RS00245 -2.1 -1.9 transcriptional activator RfaH compare
AMB_RS10350 -2.1 -1.1 DNA polymerase III subunit epsilon compare
AMB_RS18850 -2.1 -1.7 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS15610 -2.1 -4.0 hypothetical protein compare
AMB_RS02835 -2.1 -1.7 two-component sensor histidine kinase compare
AMB_RS24250 -2.1 -1.1 hypothetical protein compare
AMB_RS16130 -2.1 -2.7 phosphoglycerate dehydrogenase compare
AMB_RS00455 -2.1 -3.6 KR domain-containing protein compare
AMB_RS04845 -2.0 -1.4 hypothetical protein compare
AMB_RS16860 -2.0 -1.4 DUF4113 domain-containing protein compare
AMB_RS10820 -2.0 -10.7 benzoyl-CoA reductase subunit C compare
AMB_RS04885 -2.0 -0.6 hypothetical protein compare
AMB_RS08120 -2.0 -1.9 class I SAM-dependent methyltransferase compare
AMB_RS00355 -2.0 -3.9 radical SAM protein compare
AMB_RS23195 -2.0 -3.1 ABC transporter ATP-binding protein compare
AMB_RS10815 -1.9 -9.4 benzoyl-CoA reductase subunit B compare
AMB_RS24680 -1.9 -1.0 hypothetical protein compare
AMB_RS07070 -1.9 -1.2 Crp/Fnr family transcriptional regulator compare
AMB_RS21435 -1.9 -10.6 methylmalonyl-CoA mutase compare
AMB_RS07075 -1.9 -4.6 cytochrome c-552 precursor compare
AMB_RS10600 -1.9 -1.5 hypothetical protein compare
AMB_RS23245 -1.9 -0.7 Ni,Fe-hydrogenase maturation factor compare
AMB_RS06660 -1.9 -2.3 hypothetical protein compare
AMB_RS20665 -1.9 -0.5 class I SAM-dependent methyltransferase compare
AMB_RS09295 -1.9 -0.8 carboxymuconolactone decarboxylase family protein compare
AMB_RS10195 -1.9 -4.6 4-hydroxybenzoyl-CoA reductase subunit gamma compare
AMB_RS23015 -1.9 -1.8 septum formation protein Maf compare
AMB_RS10210 -1.9 -7.0 xanthine and CO dehydrogenase maturation factor compare
AMB_RS01830 -1.9 -0.2 hypothetical protein compare
AMB_RS01265 -1.9 -0.5 LysR family transcriptional regulator compare
AMB_RS20120 -1.8 -0.7 VOC family protein compare
AMB_RS04850 -1.8 -2.3 hypothetical protein compare
AMB_RS22450 -1.8 -5.9 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS03610 -1.8 -5.3 transcription elongation factor GreA compare
AMB_RS14185 -1.8 -3.7 HAMP domain-containing protein compare
AMB_RS10830 -1.7 -6.4 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase compare
AMB_RS11155 -1.7 -1.9 DNA-binding response regulator compare
AMB_RS01480 -1.7 -0.9 M48 family peptidase compare
AMB_RS07520 -1.7 -1.1 hypothetical protein compare
AMB_RS03040 -1.7 -2.2 ABC-type transport system compare
AMB_RS03550 -1.7 -2.1 hypothetical protein compare
AMB_RS15530 -1.7 -2.5 cytochrome c4 compare
AMB_RS02610 -1.7 -0.4 hypothetical protein compare
AMB_RS02235 -1.7 -2.7 methyltransferase domain-containing protein compare
AMB_RS15215 -1.6 -2.9 methyltransferase domain-containing protein compare
AMB_RS07700 -1.6 -0.5 hypothetical protein compare
AMB_RS20835 -1.6 -0.7 DUF2132 domain-containing protein compare
AMB_RS17625 -1.6 -5.5 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS12350 -1.6 -1.5 ABC transporter ATP-binding protein compare
AMB_RS03930 -1.6 -2.2 glycine cleavage system protein H compare
AMB_RS07415 -1.6 -1.1 DUF2946 domain-containing protein compare
AMB_RS17620 -1.6 -3.0 replication-associated recombination protein A compare
AMB_RS16025 -1.6 -2.1 MFS transporter compare
AMB_RS23205 -1.6 -4.8 glycosyl transferase compare
AMB_RS10805 -1.6 -5.3 benzoyl-CoA reductase subunit D compare
AMB_RS22580 -1.6 -5.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS04325 -1.6 -3.5 TetR/AcrR family transcriptional regulator compare
AMB_RS18110 -1.6 -1.3 cAMP-binding protein compare
AMB_RS12870 -1.6 -4.4 GNAT family N-acetyltransferase compare
AMB_RS05765 -1.6 -0.4 hypothetical protein compare
AMB_RS16715 -1.6 -1.4 hypothetical protein compare
AMB_RS05930 -1.6 -1.9 hypothetical protein compare
AMB_RS09475 -1.5 -1.6 outer membrane protein compare
AMB_RS05940 -1.5 -1.5 hypothetical protein compare
AMB_RS07115 -1.5 -1.4 Lrp/AsnC family transcriptional regulator compare
AMB_RS22285 -1.5 -5.5 sulfite exporter TauE/SafE family protein compare
AMB_RS20785 -1.5 -2.4 methylmalonyl Co-A mutase-associated GTPase MeaB compare
AMB_RS23095 -1.5 -5.2 class I SAM-dependent methyltransferase compare
AMB_RS00085 -1.5 -0.3 aspartate aminotransferase compare
AMB_RS02530 -1.5 -3.7 U32 family peptidase compare
AMB_RS22950 -1.5 -1.8 HslU--HslV peptidase proteolytic subunit compare
AMB_RS03835 -1.5 -1.1 YicC family protein compare
AMB_RS15015 -1.5 -1.5 ferredoxin compare
AMB_RS23410 -1.5 -2.8 hypothetical protein compare
AMB_RS00805 -1.5 -6.9 haloacid dehalogenase compare
AMB_RS07180 -1.5 -1.2 membrane protein compare
AMB_RS03905 -1.5 -2.4 ribonuclease H compare
AMB_RS04025 -1.4 -1.4 glutathione S-transferase compare
AMB_RS13525 -1.4 -0.8 ferredoxin-type protein NapG compare
AMB_RS10730 -1.4 -0.4 hypothetical protein compare
AMB_RS06410 -1.4 -4.1 metal-sulfur cluster assembly factor compare
AMB_RS03780 -1.4 -0.4 hypothetical protein compare
AMB_RS10810 -1.4 -2.8 benzoyl-CoA reductase subunit A compare
AMB_RS01430 -1.4 -2.0 hypothetical protein compare
AMB_RS05500 -1.4 -4.5 GDP-mannose 4,6 dehydratase compare
AMB_RS12925 -1.4 -1.5 secreted protein compare
AMB_RS21385 -1.4 -2.2 helix-turn-helix transcriptional regulator compare
AMB_RS00855 -1.4 -3.4 helix-turn-helix domain-containing protein compare
AMB_RS09095 -1.4 -1.5 hypothetical protein compare
AMB_RS14630 -1.4 -1.5 hypothetical protein compare
AMB_RS23090 -1.4 -1.4 NAD(P)-dependent oxidoreductase compare
AMB_RS14985 -1.4 -2.1 transcriptional regulator compare
AMB_RS05010 -1.4 -1.4 cation transporter compare
AMB_RS12410 -1.4 -3.9 excinuclease ABC subunit UvrA compare
AMB_RS24625 -1.4 -3.2 response regulator compare


Specific Phenotypes

For 1 genes in this experiment

For magnetic pulldown Iron in Magnetospirillum magneticum AMB-1

For magnetic pulldown Iron across organisms