| | gene | name | fitness | t score | description | |
|---|
| b0463 | acrA | -4.7 | -5.6 | multidrug efflux system (NCBI) | compare |
| b0462 | acrB | -4.3 | -10.3 | multidrug efflux system protein (NCBI) | compare |
| b3035 | tolC | -4.0 | -4.8 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3021 | ygiT | -3.7 | -4.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3199 | yrbK | -3.6 | -3.5 | hypothetical protein (NCBI) | compare |
| b0082 | mraW | -3.4 | -3.3 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0222 | lpcA | -3.4 | -2.3 | phosphoheptose isomerase (NCBI) | compare |
| b3631 | rfaG | -3.3 | -13.4 | glucosyltransferase I (NCBI) | compare |
| b3052 | rfaE | -3.2 | -3.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4203 | rplI | -3.2 | -2.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b2188 | yejM | -2.9 | -7.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3620 | rfaF | -2.9 | -2.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3621 | rfaC | -2.7 | -1.8 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3842 | rfaH | -2.7 | -3.6 | transcriptional activator RfaH (NCBI) | compare |
| b3630 | rfaP | -2.6 | -10.3 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3636 | rpmG | -2.5 | -2.4 | 50S ribosomal protein L33 (NCBI) | compare |
| b3619 | rfaD | -2.5 | -1.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2512 | yfgL | -2.4 | -4.4 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b1164 | ycgZ | -2.3 | -3.3 | hypothetical protein (NCBI) | compare |
| b2699 | recA | -2.1 | -1.4 | recombinase A (NCBI) | compare |
| b0739 | tolA | -2.1 | -3.8 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0200 | gmhB | -2.0 | -1.4 | hypothetical protein (NCBI) | compare |
| b2494 | yfgC | -2.0 | -7.0 | predicted peptidase (NCBI) | compare |
| b0737 | tolQ | -2.0 | -3.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0053 | surA | -2.0 | -3.7 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b4172 | hfq | -1.9 | -2.2 | RNA-binding protein Hfq (NCBI) | compare |
| b3726 | pstA | -1.9 | -6.0 | phosphate transporter subunit (NCBI) | compare |
| b3725 | pstB | -1.8 | -2.1 | phosphate transporter subunit (NCBI) | compare |
| b4418 | sraB | -1.8 | -1.7 | unknown RNA (NCBI) | compare |
| b2894 | xerD | -1.8 | -1.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2576 | srmB | -1.8 | -3.2 | ATP-dependent RNA helicase (NCBI) | compare |
| b2567 | rnc | -1.8 | -2.0 | ribonuclease III (NCBI) | compare |
| b1085 | b1085 | -1.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2259 | pmrD | -1.7 | -1.9 | polymyxin resistance protein B (VIMSS) | compare |
| b3463 | ftsE | -1.6 | -4.1 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3082 | ygjM | -1.6 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3483 | yhhH | -1.6 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b3462 | ftsX | -1.6 | -5.2 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0014 | dnaK | -1.6 | -1.7 | molecular chaperone DnaK (NCBI) | compare |
| b1252 | tonB | -1.6 | -2.6 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b3613 | yibP | -1.6 | -5.1 | putative membrane protein (VIMSS) | compare |
| b3728 | pstS | -1.6 | -3.8 | phosphate transporter subunit (NCBI) | compare |
| b4062 | soxS | -1.5 | -3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0741 | pal | -1.5 | -3.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2820 | recB | -1.5 | -2.3 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1712 | ihfA | -1.5 | -2.7 | integration host factor subunit alpha (NCBI) | compare |
| b0738 | tolR | -1.4 | -2.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1860 | ruvB | -1.4 | -1.7 | Holliday junction DNA helicase B (NCBI) | compare |
| b1818 | manY | -1.4 | -2.2 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1358 | ydaT | -1.3 | -1.8 | Rac prophage; predicted protein (NCBI) | compare |
| b3387 | dam | -1.3 | -8.2 | DNA adenine methylase (NCBI) | compare |
| b2330 | yfcB | -1.3 | -2.2 | putative adenine-specific methylase (VIMSS) | compare |
| b2363 | yfdT | -1.3 | -2.5 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1863 | ruvC | -1.3 | -2.8 | Holliday junction resolvase (NCBI) | compare |
| b3632 | rfaQ | -1.3 | -10.5 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0890 | ftsK | -1.3 | -5.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0436 | tig | -1.2 | -5.7 | trigger factor (NCBI) | compare |
| b1545 | pinQ | -1.2 | -1.3 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b0623 | cspE | -1.2 | -1.5 | cold shock protein E (NCBI) | compare |
| b0740 | tolB | -1.2 | -3.3 | translocation protein TolB precursor (NCBI) | compare |
| b0912 | ihfB | -1.2 | -2.7 | integration host factor subunit beta (NCBI) | compare |
| b3979 | thrT | -1.2 | -1.0 | tRNA-Thr (NCBI) | compare |
| b3741 | gidA | -1.2 | -5.5 | glucose-inhibited division protein A (NCBI) | compare |
| b1063 | yceB | -1.2 | -2.2 | predicted lipoprotein (NCBI) | compare |
| b1861 | ruvA | -1.2 | -2.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1942 | fliJ | -1.2 | -1.2 | flagellar biosynthesis chaperone (NCBI) | compare |
| b3247 | cafA | -1.2 | -6.6 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b1576 | ydfD | -1.2 | -2.1 | Qin prophage; predicted protein (NCBI) | compare |
| b0500 | ybbD | -1.1 | -2.1 | hypothetical protein (RefSeq) | compare |
| b0051 | ksgA | -1.1 | -4.3 | dimethyladenosine transferase (NCBI) | compare |
| b0605 | ahpC | -1.1 | -3.6 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1426 | ydcH | -1.1 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4402 | yjjY | -1.1 | -1.2 | hypothetical protein (NCBI) | compare |
| b4577 | sgrS | -1.1 | -1.5 | small antisense RNA (NCBI) | compare |
| b0471 | ybaB | -1.1 | -2.6 | hypothetical protein (NCBI) | compare |
| b2110 | yehC | -1.1 | -2.9 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0145 | dksA | -1.1 | -2.6 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1853 | yebK | -1.1 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4458 | oxyS | -1.1 | -1.0 | global regulatory RNA (NCBI) | compare |
| b3198 | kdsC | -1.1 | -2.0 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b1677 | lpp | -1.1 | -2.1 | murein lipoprotein (NCBI) | compare |
| b1989 | asnV | -1.1 | -1.9 | tRNA-Asn (NCBI) | compare |
| b2055 | wcaE | -1.1 | -2.3 | predicted glycosyl transferase (NCBI) | compare |
| b3029 | ygiN | -1.1 | -2.1 | quinol monooxygenase (NCBI) | compare |
| b2620 | smpB | -1.1 | -1.4 | SsrA-binding protein (NCBI) | compare |
| b3609 | secB | -1.0 | -3.3 | export protein SecB (NCBI) | compare |
| b1257 | yciE | -1.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b2937 | speB | -1.0 | -4.6 | agmatinase (NCBI) | compare |
| b4042 | dgkA | -1.0 | -2.4 | diacylglycerol kinase (NCBI) | compare |
| b0580 | ybdJ | -1.0 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b3163 | nlpI | -1.0 | -3.2 | hypothetical protein (NCBI) | compare |
| b3005 | exbD | -1.0 | -3.3 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0683 | fur | -1.0 | -1.3 | ferric uptake regulator (NCBI) | compare |
| b2617 | smpA | -1.0 | -1.9 | small membrane protein A (VIMSS) | compare |
| b3237 | argR | -1.0 | -3.1 | arginine repressor (NCBI) | compare |
| b4414 | tff | -1.0 | -2.0 | unknown RNA (NCBI) | compare |
| b1984 | asnW | -1.0 | -1.0 | tRNA-Asn (NCBI) | compare |
| b3183 | obgE | -1.0 | -1.3 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1842 | holE | -1.0 | -1.1 | DNA polymerase III, theta subunit (NCBI) | compare |
| b3839 | tatC | -1.0 | -5.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1271 | yciK | -1.0 | -2.0 | short chain dehydrogenase (NCBI) | compare |
| b3652 | recG | -0.9 | -5.6 | ATP-dependent DNA helicase (NCBI) | compare |
| b2642 | yfjW | -0.9 | -2.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1306 | pspC | -0.9 | -2.2 | DNA-binding transcriptional activator (NCBI) | compare |
| b2853 | ygeI | -0.9 | -1.7 | hypothetical protein (NCBI) | compare |
| b2209 | eco | -0.9 | -1.9 | ecotin precursor (NCBI) | compare |
| b3238 | yhcN | -0.9 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2064 | asmA | -0.9 | -1.8 | predicted assembly protein (NCBI) | compare |
| b4685 | yrbN | -0.9 | -1.8 | expressed protein (RefSeq) | compare |
| b4655 | ythA | -0.9 | -1.1 | expressed protein (RefSeq) | compare |
| b1730 | ydjO | -0.9 | -2.2 | predicted protein (RefSeq) | compare |
| b1236 | galU | -0.9 | -3.1 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3858 | yihD | -0.9 | -0.8 | hypothetical protein (NCBI) | compare |
| b1499 | ydeO | -0.9 | -1.6 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1644 | b1644 | -0.9 | -2.1 | putative membrane protein (VIMSS) | compare |
| b2569 | lepA | -0.9 | -2.7 | GTP-binding protein LepA (NCBI) | compare |
| b1074 | flgC | -0.9 | -1.3 | flagellar basal-body rod protein C (NCBI) | compare |
| b4128 | yjdK | -0.9 | -3.2 | hypothetical protein (NCBI) | compare |
| b4603 | rseX | -0.9 | -0.8 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1361 | ydaW | -0.9 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0881 | clpS | -0.9 | -1.4 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b1607 | ydgC | -0.8 | -1.3 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b3933 | ftsN | -0.8 | -4.9 | essential cell division protein (NCBI) | compare |
| b2910 | zapA | -0.8 | -2.3 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1438 | ydcQ | -0.8 | -1.8 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0767 | ybhE | -0.8 | -2.2 | 6-phosphogluconolactonase (NCBI) | compare |
| b1724 | ydiZ | -0.8 | -1.3 | hypothetical protein (NCBI) | compare |
| b3146 | yraL | -0.8 | -3.9 | predicted methyltransferase (NCBI) | compare |
| b1086 | rluC | -0.8 | -3.0 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b0547 | ybcN | -0.8 | -1.5 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0232 | yafN | -0.8 | -0.8 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1795 | yeaQ | -0.8 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b0279 | yagM | -0.8 | -3.3 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2822 | recC | -0.8 | -2.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4590 | ybfK | -0.8 | -3.1 | hypothetical protein (RefSeq) | compare |
| b1615 | uidC | -0.8 | -3.1 | membrane-associated protein (VIMSS) | compare |
| b1008 | ycdI | -0.8 | -1.7 | hypothetical protein (NCBI) | compare |
| b3242 | yhcR | -0.8 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1130 | phoP | -0.8 | -3.2 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2510 | b2510 | -0.8 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3863 | polA | -0.8 | -0.8 | DNA polymerase I (NCBI) | compare |
| b0957 | ompA | -0.8 | -2.2 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3781 | trxA | -0.8 | -2.1 | thioredoxin 1 (VIMSS) | compare |
| b2518 | ndk | -0.8 | -1.3 | nucleoside diphosphate kinase (NCBI) | compare |
| b2652 | ileY | -0.8 | -3.0 | tRNA-Ile (NCBI) | compare |
| b3811 | xerC | -0.8 | -1.5 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0953 | rmf | -0.8 | -1.5 | ribosome modulation factor (NCBI) | compare |
| b1289 | ycjD | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b0782 | moaB | -0.7 | -1.3 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b1409 | ynbB | -0.7 | -3.2 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b1936 | intG | -0.7 | -1.5 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b4598 | yncL | -0.7 | -1.2 | hypothetical protein (RefSeq) | compare |
| b1067 | yceH | -0.7 | -2.0 | hypothetical protein (NCBI) | compare |
| b0142 | folK | -0.7 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1658 | purR | -0.7 | -2.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1247 | oppF | -0.7 | -2.2 | oligopeptide transporter subunit (NCBI) | compare |
| b2071 | yegJ | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b2579 | yfiD | -0.7 | -1.3 | pyruvate formate lyase subunit (NCBI) | compare |
| b2187 | yejL | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| b4406 | yaeP | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b4443 | gcvB | -0.7 | -0.8 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b4178 | yjeB | -0.7 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0804 | ybiX | -0.7 | -1.7 | putative enzyme (VIMSS) | compare |
| b4202 | rpsR | -0.7 | -1.2 | 30S ribosomal protein S18 (NCBI) | compare |
| b4179 | vacB | -0.7 | -3.5 | putative enzyme (VIMSS) | compare |
| b3727 | pstC | -0.7 | -3.2 | phosphate transporter subunit (NCBI) | compare |
| b1573 | ydfC | -0.7 | -1.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b1413 | hrpA | -0.7 | -3.6 | ATP-dependent helicase (RefSeq) | compare |
| b4631 | ykgQ | -0.7 | -0.9 | no description | compare |
| b3961 | oxyR | -0.7 | -4.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1523 | yneG | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b0705 | ybfL | -0.7 | -1.9 | putative receptor protein (VIMSS) | compare |
| b1217 | chaB | -0.7 | -1.0 | cation transport regulator (NCBI) | compare |
| b3203 | yhbH | -0.7 | -1.9 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b3465 | yhhF | -0.7 | -3.0 | predicted methyltransferase (NCBI) | compare |
| b2706 | gutM | -0.7 | -1.4 | DNA-binding transcriptional activator of glucitol operon (NCBI) | compare |
| b1480 | sra | -0.7 | -1.3 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b0955 | ycbZ | -0.7 | -3.1 | predicted peptidase (NCBI) | compare |
| b3027 | ygiZ | -0.7 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b2847 | yqeI | -0.7 | -3.4 | predicted transcriptional regulator (NCBI) | compare |
| b1551 | b1551 | -0.7 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4373 | rimI | -0.7 | -1.3 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b4017 | arpA | -0.7 | -3.9 | regulator of acetyl CoA synthetase (NCBI) | compare |
| b4189 | yjfO | -0.7 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b4648 | ysaC | -0.7 | -1.5 | no description | compare |
| b2634 | yfjR | -0.6 | -1.6 | CP4-57 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2735 | ygbI | -0.6 | -2.2 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1731 | cedA | -0.6 | -1.4 | cell division modulator (RefSeq) | compare |
| b2625 | yfjI | -0.6 | -2.8 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b4046 | yjbK | -0.6 | -2.9 | putative regulator (VIMSS) | compare |
| b3963 | fabR | -0.6 | -3.9 | DNA-binding transcriptional repressor (RefSeq) | compare |
| b4551 | yheV | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b1830 | prc | -0.6 | -2.4 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3243 | aaeR | -0.6 | -2.0 | predicted DNA-binding transcriptional regulator, efflux system (NCBI) | compare |
| b2824 | ygdB | -0.6 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1259 | yciG | -0.6 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4155 | yjeA | -0.6 | -0.7 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b1558 | cspF | -0.6 | -1.3 | Qin prophage; cold shock protein (NCBI) | compare |
| b2513 | yfgM | -0.6 | -2.6 | hypothetical protein (NCBI) | compare |
| b0746 | valZ | -0.6 | -1.1 | tRNA-Val (NCBI) | compare |