Experiment set2IT050 for Magnetospirillum magneticum AMB-1

Compare to:

30_an_mag_2

200 most important genes:

  gene name fitness t score description  
AMB_RS17335 -5.8 -2.6 N-acyl-L-homoserine lactone synthetase compare
AMB_RS03045 -5.5 -1.9 hydrogen peroxide-inducible genes activator compare
AMB_RS17350 -4.9 -3.1 rubrerythrin compare
AMB_RS11640 -4.9 -3.1 UbiX family flavin prenyltransferase compare
AMB_RS21265 -4.4 -8.5 c-type cytochrome biogenesis protein CcmI compare
AMB_RS01190 -4.2 -5.8 UbiD family decarboxylase compare
AMB_RS06370 -4.2 -2.9 DNA-binding response regulator compare
AMB_RS20350 -4.1 -12.5 aspartate 1-decarboxylase compare
AMB_RS02525 -4.0 -16.9 U32 family peptidase compare
AMB_RS15295 -4.0 -2.0 iron donor protein CyaY compare
AMB_RS22800 -3.9 -4.1 glutathione synthase compare
AMB_RS11740 -3.9 -17.5 ubiquinone-binding protein compare
AMB_RS23155 -3.9 -1.4 two-component sensor histidine kinase compare
AMB_RS22450 -3.8 -15.7 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS04955 -3.8 -23.2 cation transporter compare
AMB_RS02530 -3.8 -11.2 U32 family peptidase compare
AMB_RS17235 -3.8 -1.9 AsmA family protein compare
AMB_RS07660 -3.8 -1.5 hypothetical protein compare
AMB_RS04970 -3.7 -12.4 PDZ domain-containing protein compare
AMB_RS01330 -3.7 -5.0 glycosyltransferase family 39 protein compare
AMB_RS07745 -3.6 -3.1 disulfide bond formation protein B compare
AMB_RS24350 -3.6 -1.6 hypothetical protein compare
AMB_RS04930 -3.6 -26.5 PDZ domain-containing protein compare
AMB_RS04960 -3.5 -10.8 Na+/H+ antiporter NhaD compare
AMB_RS24545 -3.5 -1.2 hypothetical protein compare
AMB_RS16130 -3.4 -5.2 phosphoglycerate dehydrogenase compare
AMB_RS23165 -3.4 -4.5 hypothetical protein compare
AMB_RS21290 -3.3 -2.9 DUF4139 domain-containing protein compare
AMB_RS05910 -3.3 -1.2 hypothetical protein compare
AMB_RS04965 -3.3 -15.4 trypsin-like serine protease compare
AMB_RS00355 -3.3 -7.9 radical SAM protein compare
AMB_RS11195 -3.2 -0.9 sulfate adenylyltransferase subunit 2 compare
AMB_RS04950 -3.2 -7.7 hypothetical protein compare
AMB_RS20145 -3.1 -1.3 chromosome segregation ATPase compare
AMB_RS17625 -3.0 -14.8 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS05000 -2.9 -13.3 hypothetical protein compare
AMB_RS16080 -2.9 -2.5 tRNA-Glu compare
AMB_RS03230 -2.9 -2.5 hypothetical protein compare
AMB_RS02835 -2.9 -2.5 two-component sensor histidine kinase compare
AMB_RS17540 -2.8 -1.7 potassium transporter KefB compare
AMB_RS04945 -2.8 -13.3 hypothetical protein compare
AMB_RS17945 -2.8 -1.9 hypothetical protein compare
AMB_RS09295 -2.7 -1.8 carboxymuconolactone decarboxylase family protein compare
AMB_RS13920 -2.7 -1.9 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS14035 -2.6 -6.8 endopeptidase La compare
AMB_RS04630 -2.6 -0.5 tRNA-Met compare
AMB_RS02610 -2.6 -0.9 hypothetical protein compare
AMB_RS19340 -2.6 -0.7 EamA family transporter compare
AMB_RS16100 -2.6 -4.6 RNA polymerase sigma factor RpoH compare
AMB_RS07700 -2.6 -1.2 hypothetical protein compare
AMB_RS15610 -2.5 -8.7 hypothetical protein compare
AMB_RS03725 -2.5 -7.6 DNA helicase II compare
AMB_RS03060 -2.5 -1.9 peptidoglycan editing factor PgeF compare
AMB_RS19230 -2.4 -5.0 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS08460 -2.4 -10.3 branched-chain amino acid ABC transporter permease compare
AMB_RS22005 -2.4 -1.2 HD domain-containing protein compare
AMB_RS03780 -2.4 -0.9 hypothetical protein compare
AMB_RS08470 -2.4 -5.8 ABC transporter ATP-binding protein compare
AMB_RS19860 -2.4 -6.8 HlyC/CorC family transporter compare
AMB_RS05435 -2.4 -3.5 ABC transporter permease compare
AMB_RS08465 -2.3 -8.6 ABC transporter ATP-binding protein compare
AMB_RS22315 -2.3 -4.4 membrane protein compare
AMB_RS00960 -2.3 -10.4 DNA-binding response regulator compare
AMB_RS00820 -2.3 -3.5 GDP-L-fucose synthase compare
AMB_RS21455 -2.3 -5.4 XRE family transcriptional regulator compare
AMB_RS19880 -2.3 -3.8 site-specific tyrosine recombinase XerD compare
AMB_RS14175 -2.3 -2.2 COQ9 family protein compare
AMB_RS17450 -2.3 -0.8 DUF1987 domain-containing protein compare
AMB_RS01830 -2.3 -0.4 hypothetical protein compare
AMB_RS03205 -2.3 -2.2 DNA recombination/repair protein RecA compare
AMB_RS01910 -2.2 -0.9 head decoration protein compare
AMB_RS09095 -2.2 -3.8 hypothetical protein compare
AMB_RS19790 -2.2 -3.7 NAD(P)-dependent oxidoreductase compare
AMB_RS08455 -2.2 -11.1 branched-chain amino acid ABC transporter permease compare
AMB_RS01265 -2.1 -1.1 LysR family transcriptional regulator compare
AMB_RS21955 -2.1 -1.1 hypothetical protein compare
AMB_RS04900 -2.1 -4.6 hypothetical protein compare
AMB_RS12590 -2.1 -9.9 tetratricopeptide repeat protein compare
AMB_RS13510 -2.0 -3.9 cytochrome C protein NapC compare
AMB_RS00010 -2.0 -1.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS01655 -2.0 -0.9 hypothetical protein compare
AMB_RS17550 -2.0 -8.5 2-isopropylmalate synthase compare
AMB_RS02500 -2.0 -2.0 hypothetical protein compare
AMB_RS12785 -1.9 -3.1 murein transglycosylase compare
AMB_RS04975 -1.9 -7.6 tetratricopeptide repeat protein compare
AMB_RS13515 -1.9 -2.0 nitrate reductase cytochrome c-type subunit compare
AMB_RS07840 -1.8 -10.1 ABC transporter substrate-binding protein compare
AMB_RS04995 -1.8 -6.0 hypothetical protein compare
AMB_RS22280 -1.8 -10.1 hypothetical protein compare
AMB_RS22325 -1.8 -7.3 4Fe-4S binding domain-containing protein compare
AMB_RS07070 -1.8 -1.7 Crp/Fnr family transcriptional regulator compare
AMB_RS01080 -1.8 -1.8 exodeoxyribonuclease VII large subunit compare
AMB_RS00695 -1.7 -1.3 gfo/Idh/MocA family oxidoreductase compare
AMB_RS08360 -1.7 -2.6 hypothetical protein compare
AMB_RS01325 -1.7 -2.3 phosphatase PAP2 family protein compare
AMB_RS23195 -1.7 -3.1 ABC transporter ATP-binding protein compare
AMB_RS03110 -1.7 -1.3 membrane protein compare
AMB_RS20750 -1.6 -6.2 YbaB/EbfC family nucleoid-associated protein compare
AMB_RS05220 -1.6 -0.6 hypothetical protein compare
AMB_RS00075 -1.6 -1.2 P-II family nitrogen regulator compare
AMB_RS01605 -1.6 -1.5 aspartate aminotransferase family protein compare
AMB_RS11390 -1.6 -2.6 NYN domain-containing protein compare
AMB_RS05350 -1.6 -0.5 hypothetical protein compare
AMB_RS08450 -1.5 -8.5 ABC transporter substrate-binding protein compare
AMB_RS13525 -1.5 -1.7 ferredoxin-type protein NapG compare
AMB_RS16330 -1.5 -3.9 indolepyruvate oxidoreductase compare
AMB_RS24240 -1.5 -1.0 hypothetical protein compare
AMB_RS13530 -1.5 -9.6 periplasmic nitrate reductase subunit alpha compare
AMB_RS09970 -1.4 -0.3 NAD synthetase compare
AMB_RS12870 -1.4 -8.1 GNAT family N-acetyltransferase compare
AMB_RS13535 -1.4 -3.1 hypothetical protein compare
AMB_RS06630 -1.4 -3.2 hypothetical protein compare
AMB_RS22480 -1.4 -0.8 cell division ATP-binding protein FtsE compare
AMB_RS08330 -1.4 -1.7 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS22010 -1.4 -1.3 hypothetical protein compare
AMB_RS00965 -1.4 -1.5 membrane protein compare
AMB_RS17050 -1.4 -3.0 sulfurtransferase TusC compare
AMB_RS09120 -1.4 -2.7 ABC transporter ATP-binding protein compare
AMB_RS07110 -1.4 -1.5 Lrp/AsnC family transcriptional regulator compare
AMB_RS24000 -1.3 -1.5 glycosyltransferase family 1 protein compare
AMB_RS08430 -1.3 -4.3 glutathione-disulfide reductase compare
AMB_RS17355 -1.3 -1.3 membrane protein compare
AMB_RS14120 -1.3 -2.1 EamA family transporter compare
AMB_RS07105 -1.3 -1.7 Lrp/AsnC family transcriptional regulator compare
AMB_RS21185 -1.3 -2.6 GntR family transcriptional regulator compare
AMB_RS17925 -1.3 -9.7 formate dehydrogenase compare
AMB_RS21750 -1.2 -1.2 DNA-binding response regulator compare
AMB_RS22965 -1.2 -2.0 XRE family transcriptional regulator compare
AMB_RS07065 -1.2 -5.1 Crp/Fnr family transcriptional regulator compare
AMB_RS14195 -1.2 -3.5 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta compare
AMB_RS12615 -1.2 -2.6 phytoene/squalene synthetase compare
AMB_RS01430 -1.2 -1.6 hypothetical protein compare
AMB_RS13520 -1.2 -6.1 quinol dehydrogenase ferredoxin subunit NapH compare
AMB_RS21320 -1.2 -3.1 alpha/beta hydrolase compare
AMB_RS21535 -1.2 -0.7 cyclic nucleotide-binding domain-containing protein compare
AMB_RS24675 -1.2 -1.0 hypothetical protein compare
AMB_RS22490 -1.2 -1.6 YdcF family protein compare
AMB_RS02660 -1.2 -2.6 SCO family protein compare
AMB_RS14190 -1.1 -3.5 cytochrome C biogenesis protein CcsA compare
AMB_RS17930 -1.1 -6.9 4Fe-4S dicluster domain-containing protein compare
AMB_RS07115 -1.1 -2.0 Lrp/AsnC family transcriptional regulator compare
AMB_RS17345 -1.1 -1.2 rubredoxin compare
AMB_RS10120 -1.1 -1.2 DUF1476 domain-containing protein compare
AMB_RS17935 -1.1 -5.7 DMSO reductase compare
AMB_RS17645 -1.1 -8.1 iron-sulfur cluster carrier protein ApbC compare
AMB_RS04920 -1.1 -3.7 MFS transporter compare
AMB_RS15605 -1.1 -3.9 ChbG/HpnK family deacetylase compare
AMB_RS13715 -1.1 -2.2 hypothetical protein compare
AMB_RS12560 -1.1 -1.2 penicillin-insensitive murein endopeptidase compare
AMB_RS14455 -1.1 -1.4 ABC transporter ATP-binding protein compare
AMB_RS20665 -1.1 -0.9 class I SAM-dependent methyltransferase compare
AMB_RS24365 -1.1 -3.1 hypothetical protein compare
AMB_RS02550 -1.1 -1.5 DNA polymerase III compare
AMB_RS12190 -1.1 -1.3 hypothetical protein compare
AMB_RS04850 -1.1 -2.1 hypothetical protein compare
AMB_RS21385 -1.1 -3.0 helix-turn-helix transcriptional regulator compare
AMB_RS19850 -1.1 -1.3 hypothetical protein compare
AMB_RS03040 -1.0 -2.1 ABC-type transport system compare
AMB_RS07075 -1.0 -6.3 cytochrome c-552 precursor compare
AMB_RS18850 -1.0 -1.6 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS13585 -1.0 -2.2 alpha/beta hydrolase compare
AMB_RS09090 -1.0 -2.4 hypothetical protein compare
AMB_RS09725 -1.0 -1.6 phage tail assembly chaperone compare
AMB_RS14565 -1.0 -2.2 sensor histidine kinase compare
AMB_RS13275 -1.0 -0.9 response regulator compare
AMB_RS06005 -1.0 -0.9 hypothetical protein compare
AMB_RS11155 -1.0 -1.6 DNA-binding response regulator compare
AMB_RS04895 -1.0 -4.0 hypothetical protein compare
AMB_RS03005 -1.0 -1.7 carbonate dehydratase compare
AMB_RS14620 -1.0 -1.6 ArsR family transcriptional regulator compare
AMB_RS00990 -1.0 -2.2 hypothetical protein compare
AMB_RS01525 -1.0 -1.1 RNA pyrophosphohydrolase compare
AMB_RS15550 -1.0 -2.7 copper chaperone PCu(A)C compare
AMB_RS11000 -0.9 -2.4 N-formylglutamate amidohydrolase compare
AMB_RS07010 -0.9 -3.9 ATP-dependent helicase compare
AMB_RS12920 -0.9 -2.2 exo-beta-1,3-glucanase compare
AMB_RS06295 -0.9 -3.6 LysR family transcriptional regulator compare
AMB_RS06785 -0.9 -0.7 hypothetical protein compare
AMB_RS02705 -0.9 -1.7 ribbon-helix-helix protein, CopG family compare
AMB_RS07865 -0.9 -5.9 ATP-dependent chaperone ClpB compare
AMB_RS14520 -0.9 -1.1 1,4-beta-N-acetylmuramidase compare
AMB_RS07120 -0.9 -3.6 heme d1 biosynthesis radical SAM protein NirJ compare
AMB_RS13765 -0.9 -3.1 hypothetical protein compare
AMB_RS16940 -0.9 -1.6 hypothetical protein compare
AMB_RS06770 -0.9 -1.5 DUF983 domain-containing protein compare
AMB_RS02235 -0.9 -1.5 methyltransferase domain-containing protein compare
AMB_RS14815 -0.9 -4.0 CbbQ/NirQ/NorQ/GpvN family protein compare
AMB_RS22275 -0.9 -2.5 universal stress protein compare
AMB_RS19255 -0.9 -4.6 excinuclease ABC subunit UvrB compare
AMB_RS07630 -0.9 -1.0 hypothetical protein compare
AMB_RS23170 -0.9 -1.5 hypothetical protein compare
AMB_RS18250 -0.9 -1.7 hypothetical protein compare
AMB_RS06135 -0.9 -1.4 MBL fold metallo-hydrolase compare
AMB_RS13675 -0.9 -1.7 DUF2800 domain-containing protein compare
AMB_RS02725 -0.9 -1.0 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS15630 -0.9 -2.9 AsmA family protein compare
AMB_RS13145 -0.9 -1.5 positive regulator of sigma E activity compare
AMB_RS05625 -0.9 -1.4 phosphate ABC transporter ATP-binding protein compare
AMB_RS01700 -0.9 -1.8 hypothetical protein compare
AMB_RS07060 -0.9 -5.1 nitrite reductase compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms