Experiment set2IT049 for Magnetospirillum magneticum AMB-1

Compare to:

30_an_mag_1

200 most important genes:

  gene name fitness t score description  
AMB_RS03045 -5.8 -1.9 hydrogen peroxide-inducible genes activator compare
AMB_RS17335 -5.2 -3.7 N-acyl-L-homoserine lactone synthetase compare
AMB_RS17235 -5.0 -1.9 AsmA family protein compare
AMB_RS22800 -4.8 -3.0 glutathione synthase compare
AMB_RS21535 -4.8 -1.6 cyclic nucleotide-binding domain-containing protein compare
AMB_RS11640 -4.8 -3.8 UbiX family flavin prenyltransferase compare
AMB_RS17350 -4.8 -3.8 rubrerythrin compare
AMB_RS07745 -4.7 -2.4 disulfide bond formation protein B compare
AMB_RS01190 -4.6 -5.5 UbiD family decarboxylase compare
AMB_RS20350 -4.5 -13.8 aspartate 1-decarboxylase compare
AMB_RS11740 -4.3 -18.8 ubiquinone-binding protein compare
AMB_RS23155 -4.1 -1.3 two-component sensor histidine kinase compare
AMB_RS02525 -4.1 -14.2 U32 family peptidase compare
AMB_RS07660 -4.0 -1.5 hypothetical protein compare
AMB_RS06370 -4.0 -3.4 DNA-binding response regulator compare
AMB_RS24350 -3.8 -1.6 hypothetical protein compare
AMB_RS24545 -3.7 -1.2 hypothetical protein compare
AMB_RS00075 -3.7 -2.0 P-II family nitrogen regulator compare
AMB_RS23165 -3.7 -5.1 hypothetical protein compare
AMB_RS04950 -3.7 -11.1 hypothetical protein compare
AMB_RS15295 -3.7 -2.3 iron donor protein CyaY compare
AMB_RS01330 -3.6 -6.5 glycosyltransferase family 39 protein compare
AMB_RS04930 -3.6 -27.4 PDZ domain-containing protein compare
AMB_RS04970 -3.6 -13.6 PDZ domain-containing protein compare
AMB_RS05910 -3.6 -1.1 hypothetical protein compare
AMB_RS14175 -3.5 -2.7 COQ9 family protein compare
AMB_RS04965 -3.5 -14.7 trypsin-like serine protease compare
AMB_RS04955 -3.4 -23.0 cation transporter compare
AMB_RS21265 -3.4 -7.5 c-type cytochrome biogenesis protein CcmI compare
AMB_RS11195 -3.4 -0.9 sulfate adenylyltransferase subunit 2 compare
AMB_RS22450 -3.4 -15.9 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS00355 -3.4 -8.2 radical SAM protein compare
AMB_RS02530 -3.2 -13.7 U32 family peptidase compare
AMB_RS22480 -3.2 -0.9 cell division ATP-binding protein FtsE compare
AMB_RS01265 -3.2 -1.2 LysR family transcriptional regulator compare
AMB_RS04960 -3.1 -12.0 Na+/H+ antiporter NhaD compare
AMB_RS09295 -3.0 -1.9 carboxymuconolactone decarboxylase family protein compare
AMB_RS17625 -2.9 -14.2 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS02610 -2.9 -0.9 hypothetical protein compare
AMB_RS08455 -2.9 -12.7 branched-chain amino acid ABC transporter permease compare
AMB_RS16100 -2.9 -5.9 RNA polymerase sigma factor RpoH compare
AMB_RS08465 -2.9 -9.9 ABC transporter ATP-binding protein compare
AMB_RS22280 -2.9 -17.3 hypothetical protein compare
AMB_RS07700 -2.8 -1.2 hypothetical protein compare
AMB_RS21455 -2.8 -7.1 XRE family transcriptional regulator compare
AMB_RS09095 -2.8 -4.8 hypothetical protein compare
AMB_RS19860 -2.8 -8.5 HlyC/CorC family transporter compare
AMB_RS04630 -2.8 -0.5 tRNA-Met compare
AMB_RS19340 -2.8 -0.7 EamA family transporter compare
AMB_RS17540 -2.7 -1.7 potassium transporter KefB compare
AMB_RS17945 -2.7 -2.0 hypothetical protein compare
AMB_RS15610 -2.7 -9.9 hypothetical protein compare
AMB_RS22005 -2.7 -1.2 HD domain-containing protein compare
AMB_RS05435 -2.6 -3.9 ABC transporter permease compare
AMB_RS21290 -2.6 -2.8 DUF4139 domain-containing protein compare
AMB_RS03780 -2.6 -1.0 hypothetical protein compare
AMB_RS04945 -2.6 -14.2 hypothetical protein compare
AMB_RS00010 -2.6 -1.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS05000 -2.6 -11.6 hypothetical protein compare
AMB_RS17450 -2.5 -0.8 DUF1987 domain-containing protein compare
AMB_RS13510 -2.5 -4.9 cytochrome C protein NapC compare
AMB_RS16130 -2.5 -5.7 phosphoglycerate dehydrogenase compare
AMB_RS01910 -2.5 -0.9 head decoration protein compare
AMB_RS00820 -2.5 -3.8 GDP-L-fucose synthase compare
AMB_RS01830 -2.5 -0.4 hypothetical protein compare
AMB_RS21750 -2.4 -1.7 DNA-binding response regulator compare
AMB_RS12785 -2.4 -4.0 murein transglycosylase compare
AMB_RS07070 -2.4 -2.1 Crp/Fnr family transcriptional regulator compare
AMB_RS08460 -2.4 -11.2 branched-chain amino acid ABC transporter permease compare
AMB_RS01080 -2.3 -2.2 exodeoxyribonuclease VII large subunit compare
AMB_RS19790 -2.3 -4.3 NAD(P)-dependent oxidoreductase compare
AMB_RS19230 -2.3 -4.0 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS01655 -2.2 -0.9 hypothetical protein compare
AMB_RS14035 -2.2 -5.7 endopeptidase La compare
AMB_RS08470 -2.2 -5.3 ABC transporter ATP-binding protein compare
AMB_RS23195 -2.2 -4.0 ABC transporter ATP-binding protein compare
AMB_RS19880 -2.2 -3.7 site-specific tyrosine recombinase XerD compare
AMB_RS20750 -2.2 -7.6 YbaB/EbfC family nucleoid-associated protein compare
AMB_RS12190 -2.1 -2.3 hypothetical protein compare
AMB_RS03725 -2.0 -6.3 DNA helicase II compare
AMB_RS18505 -2.0 -1.7 hypothetical protein compare
AMB_RS20145 -2.0 -1.1 chromosome segregation ATPase compare
AMB_RS19545 -1.9 -2.4 elongation factor 4 compare
AMB_RS07840 -1.9 -10.7 ABC transporter substrate-binding protein compare
AMB_RS01325 -1.9 -2.5 phosphatase PAP2 family protein compare
AMB_RS17550 -1.8 -8.0 2-isopropylmalate synthase compare
AMB_RS04975 -1.8 -7.8 tetratricopeptide repeat protein compare
AMB_RS05350 -1.8 -0.6 hypothetical protein compare
AMB_RS04900 -1.7 -5.8 hypothetical protein compare
AMB_RS02835 -1.7 -1.7 two-component sensor histidine kinase compare
AMB_RS02725 -1.7 -1.5 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS12590 -1.7 -7.2 tetratricopeptide repeat protein compare
AMB_RS22325 -1.7 -7.1 4Fe-4S binding domain-containing protein compare
AMB_RS21955 -1.7 -1.4 hypothetical protein compare
AMB_RS08330 -1.6 -2.0 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS06630 -1.6 -3.9 hypothetical protein compare
AMB_RS13535 -1.6 -3.9 hypothetical protein compare
AMB_RS17345 -1.6 -1.6 rubredoxin compare
AMB_RS13920 -1.6 -1.3 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS04995 -1.6 -5.3 hypothetical protein compare
AMB_RS09970 -1.6 -0.3 NAD synthetase compare
AMB_RS08450 -1.6 -8.7 ABC transporter substrate-binding protein compare
AMB_RS03060 -1.6 -1.4 peptidoglycan editing factor PgeF compare
AMB_RS22315 -1.6 -3.8 membrane protein compare
AMB_RS13515 -1.6 -1.7 nitrate reductase cytochrome c-type subunit compare
AMB_RS21385 -1.5 -4.4 helix-turn-helix transcriptional regulator compare
AMB_RS11390 -1.5 -2.1 NYN domain-containing protein compare
AMB_RS18850 -1.5 -2.3 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS07105 -1.5 -2.0 Lrp/AsnC family transcriptional regulator compare
AMB_RS03110 -1.4 -1.1 membrane protein compare
AMB_RS07010 -1.4 -6.0 ATP-dependent helicase compare
AMB_RS18590 -1.4 -1.5 glycosyltransferase family 2 protein compare
AMB_RS00695 -1.4 -1.1 gfo/Idh/MocA family oxidoreductase compare
AMB_RS22965 -1.4 -2.2 XRE family transcriptional regulator compare
AMB_RS01430 -1.4 -1.8 hypothetical protein compare
AMB_RS07110 -1.3 -1.5 Lrp/AsnC family transcriptional regulator compare
AMB_RS18110 -1.3 -2.2 cAMP-binding protein compare
AMB_RS12870 -1.3 -7.7 GNAT family N-acetyltransferase compare
AMB_RS06005 -1.3 -1.2 hypothetical protein compare
AMB_RS13520 -1.3 -6.1 quinol dehydrogenase ferredoxin subunit NapH compare
AMB_RS12560 -1.3 -1.4 penicillin-insensitive murein endopeptidase compare
AMB_RS13530 -1.3 -7.6 periplasmic nitrate reductase subunit alpha compare
AMB_RS10120 -1.2 -1.3 DUF1476 domain-containing protein compare
AMB_RS00965 -1.2 -1.6 membrane protein compare
AMB_RS13675 -1.2 -2.4 DUF2800 domain-containing protein compare
AMB_RS03230 -1.2 -1.2 hypothetical protein compare
AMB_RS16330 -1.2 -3.1 indolepyruvate oxidoreductase compare
AMB_RS11000 -1.2 -3.0 N-formylglutamate amidohydrolase compare
AMB_RS07115 -1.2 -1.7 Lrp/AsnC family transcriptional regulator compare
AMB_RS00990 -1.2 -2.6 hypothetical protein compare
AMB_RS24365 -1.2 -3.4 hypothetical protein compare
AMB_RS12385 -1.2 -3.2 alanine--glyoxylate aminotransferase family protein compare
AMB_RS20195 -1.2 -1.1 iron transporter MagA compare
AMB_RS17645 -1.2 -7.8 iron-sulfur cluster carrier protein ApbC compare
AMB_RS07065 -1.2 -4.9 Crp/Fnr family transcriptional regulator compare
AMB_RS08360 -1.2 -2.1 hypothetical protein compare
AMB_RS17935 -1.2 -5.5 DMSO reductase compare
AMB_RS17930 -1.2 -6.8 4Fe-4S dicluster domain-containing protein compare
AMB_RS07075 -1.2 -6.2 cytochrome c-552 precursor compare
AMB_RS20755 -1.2 -1.3 recombination protein RecR compare
AMB_RS22760 -1.1 -1.3 ribonuclease PH compare
AMB_RS17925 -1.1 -8.9 formate dehydrogenase compare
AMB_RS14455 -1.1 -1.4 ABC transporter ATP-binding protein compare
AMB_RS05505 -1.1 -2.9 GDP-mannose 4,6-dehydratase compare
AMB_RS02880 -1.1 -1.3 hypothetical protein compare
AMB_RS13525 -1.1 -1.7 ferredoxin-type protein NapG compare
AMB_RS02550 -1.1 -1.7 DNA polymerase III compare
AMB_RS05625 -1.1 -1.9 phosphate ABC transporter ATP-binding protein compare
AMB_RS14855 -1.1 -1.3 molybdate ABC transporter substrate-binding protein compare
AMB_RS13585 -1.1 -2.6 alpha/beta hydrolase compare
AMB_RS15550 -1.1 -2.9 copper chaperone PCu(A)C compare
AMB_RS09120 -1.1 -2.3 ABC transporter ATP-binding protein compare
AMB_RS21280 -1.1 -2.2 TVP38/TMEM64 family protein compare
AMB_RS00960 -1.1 -4.8 DNA-binding response regulator compare
AMB_RS19255 -1.1 -5.0 excinuclease ABC subunit UvrB compare
AMB_RS14815 -1.1 -4.7 CbbQ/NirQ/NorQ/GpvN family protein compare
AMB_RS01745 -1.1 -1.4 hypothetical protein compare
AMB_RS21320 -1.1 -2.5 alpha/beta hydrolase compare
AMB_RS08430 -1.1 -3.4 glutathione-disulfide reductase compare
AMB_RS14190 -1.1 -2.7 cytochrome C biogenesis protein CcsA compare
AMB_RS16080 -1.1 -1.1 tRNA-Glu compare
AMB_RS19160 -1.1 -1.4 methyltransferase domain-containing protein compare
AMB_RS14565 -1.0 -1.7 sensor histidine kinase compare
AMB_RS17050 -1.0 -2.2 sulfurtransferase TusC compare
AMB_RS21185 -1.0 -2.3 GntR family transcriptional regulator compare
AMB_RS02660 -1.0 -2.4 SCO family protein compare
AMB_RS00050 -1.0 -2.4 ATP-dependent protease compare
AMB_RS07180 -1.0 -1.3 membrane protein compare
AMB_RS24615 -1.0 -2.0 IS3 family transposase compare
AMB_RS20120 -1.0 -1.5 VOC family protein compare
AMB_RS17035 -1.0 -2.9 dissimilatory-type sulfite reductase subunit alpha compare
AMB_RS12600 -1.0 -0.6 amino acid-binding protein compare
AMB_RS01415 -1.0 -0.7 rhodanese-like domain-containing protein compare
AMB_RS22580 -1.0 -5.6 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS14810 -1.0 -6.8 VWA domain-containing protein compare
AMB_RS04895 -1.0 -3.3 hypothetical protein compare
AMB_RS13765 -1.0 -3.6 hypothetical protein compare
AMB_RS15095 -0.9 -1.3 LamB/YcsF family protein compare
AMB_RS05510 -0.9 -2.7 glycosyltransferase compare
AMB_RS14185 -0.9 -2.4 HAMP domain-containing protein compare
AMB_RS21025 -0.9 -6.7 DUF3422 domain-containing protein compare
AMB_RS06770 -0.9 -1.5 DUF983 domain-containing protein compare
AMB_RS17355 -0.9 -1.0 membrane protein compare
AMB_RS17045 -0.9 -1.4 sulfurtransferase TusD compare
AMB_RS15530 -0.9 -3.1 cytochrome c4 compare
AMB_RS11460 -0.9 -1.6 MFS transporter compare
AMB_RS00180 -0.9 -2.7 hypothetical protein compare
AMB_RS01700 -0.9 -1.8 hypothetical protein compare
AMB_RS01525 -0.9 -1.0 RNA pyrophosphohydrolase compare
AMB_RS13360 -0.9 -2.3 thiol:disulfide oxidoreductase compare
AMB_RS02650 -0.9 -3.9 uroporphyrinogen-III C-methyltransferase compare
AMB_RS16375 -0.9 -1.4 MFS transporter compare
AMB_RS02520 -0.9 -2.7 hypothetical protein compare
AMB_RS02235 -0.9 -1.5 methyltransferase domain-containing protein compare
AMB_RS23055 -0.9 -1.4 methylated-DNA--protein-cysteine methyltransferase compare
AMB_RS15630 -0.9 -2.7 AsmA family protein compare
AMB_RS23410 -0.9 -2.2 hypothetical protein compare
AMB_RS19850 -0.9 -1.3 hypothetical protein compare
AMB_RS09725 -0.9 -1.3 phage tail assembly chaperone compare
AMB_RS18250 -0.9 -1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms