Experiment set2IT048 for Magnetospirillum magneticum AMB-1

Compare to:

30_an_initial_3

200 most important genes:

  gene name fitness t score description  
AMB_RS03045 -5.6 -2.1 hydrogen peroxide-inducible genes activator compare
AMB_RS17335 -5.0 -3.9 N-acyl-L-homoserine lactone synthetase compare
AMB_RS11640 -4.9 -3.3 UbiX family flavin prenyltransferase compare
AMB_RS01190 -4.6 -4.5 UbiD family decarboxylase compare
AMB_RS21535 -4.6 -1.7 cyclic nucleotide-binding domain-containing protein compare
AMB_RS17350 -4.5 -4.1 rubrerythrin compare
AMB_RS20350 -4.2 -13.0 aspartate 1-decarboxylase compare
AMB_RS22800 -4.1 -4.0 glutathione synthase compare
AMB_RS15295 -4.0 -2.1 iron donor protein CyaY compare
AMB_RS23155 -3.9 -1.4 two-component sensor histidine kinase compare
AMB_RS07660 -3.9 -1.6 hypothetical protein compare
AMB_RS17235 -3.9 -2.1 AsmA family protein compare
AMB_RS02725 -3.8 -2.2 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS24350 -3.6 -1.7 hypothetical protein compare
AMB_RS11740 -3.6 -17.5 ubiquinone-binding protein compare
AMB_RS21290 -3.5 -3.2 DUF4139 domain-containing protein compare
AMB_RS24545 -3.5 -1.3 hypothetical protein compare
AMB_RS00355 -3.4 -8.0 radical SAM protein compare
AMB_RS00075 -3.4 -2.1 P-II family nitrogen regulator compare
AMB_RS02525 -3.4 -13.7 U32 family peptidase compare
AMB_RS05910 -3.4 -1.3 hypothetical protein compare
AMB_RS01330 -3.3 -6.0 glycosyltransferase family 39 protein compare
AMB_RS17625 -3.3 -16.9 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS06370 -3.3 -3.8 DNA-binding response regulator compare
AMB_RS02530 -3.2 -13.0 U32 family peptidase compare
AMB_RS11195 -3.2 -0.9 sulfate adenylyltransferase subunit 2 compare
AMB_RS03110 -3.1 -2.4 membrane protein compare
AMB_RS22450 -3.1 -14.0 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS01265 -2.9 -1.3 LysR family transcriptional regulator compare
AMB_RS17540 -2.9 -1.8 potassium transporter KefB compare
AMB_RS16100 -2.8 -5.7 RNA polymerase sigma factor RpoH compare
AMB_RS19860 -2.7 -8.8 HlyC/CorC family transporter compare
AMB_RS14175 -2.7 -2.4 COQ9 family protein compare
AMB_RS02610 -2.7 -1.0 hypothetical protein compare
AMB_RS07700 -2.7 -1.3 hypothetical protein compare
AMB_RS04630 -2.6 -0.6 tRNA-Met compare
AMB_RS05435 -2.6 -4.0 ABC transporter permease compare
AMB_RS09295 -2.6 -2.5 carboxymuconolactone decarboxylase family protein compare
AMB_RS21455 -2.5 -5.7 XRE family transcriptional regulator compare
AMB_RS21265 -2.5 -5.1 c-type cytochrome biogenesis protein CcmI compare
AMB_RS00695 -2.5 -1.7 gfo/Idh/MocA family oxidoreductase compare
AMB_RS12785 -2.5 -4.5 murein transglycosylase compare
AMB_RS07070 -2.5 -2.3 Crp/Fnr family transcriptional regulator compare
AMB_RS14520 -2.5 -3.0 1,4-beta-N-acetylmuramidase compare
AMB_RS02835 -2.5 -2.4 two-component sensor histidine kinase compare
AMB_RS22005 -2.4 -1.3 HD domain-containing protein compare
AMB_RS14035 -2.4 -6.5 endopeptidase La compare
AMB_RS19880 -2.4 -4.6 site-specific tyrosine recombinase XerD compare
AMB_RS08455 -2.4 -11.5 branched-chain amino acid ABC transporter permease compare
AMB_RS16130 -2.4 -4.4 phosphoglycerate dehydrogenase compare
AMB_RS01830 -2.3 -0.5 hypothetical protein compare
AMB_RS01910 -2.3 -1.0 head decoration protein compare
AMB_RS19230 -2.3 -5.0 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS15610 -2.3 -7.7 hypothetical protein compare
AMB_RS13510 -2.3 -4.5 cytochrome C protein NapC compare
AMB_RS08465 -2.3 -8.5 ABC transporter ATP-binding protein compare
AMB_RS19545 -2.2 -2.8 elongation factor 4 compare
AMB_RS17945 -2.2 -2.0 hypothetical protein compare
AMB_RS22315 -2.2 -4.4 membrane protein compare
AMB_RS08470 -2.2 -4.9 ABC transporter ATP-binding protein compare
AMB_RS16080 -2.2 -2.2 tRNA-Glu compare
AMB_RS19340 -2.2 -0.9 EamA family transporter compare
AMB_RS00820 -2.2 -3.5 GDP-L-fucose synthase compare
AMB_RS20145 -2.2 -1.3 chromosome segregation ATPase compare
AMB_RS03725 -2.2 -6.0 DNA helicase II compare
AMB_RS22280 -2.2 -14.5 hypothetical protein compare
AMB_RS19790 -2.1 -2.7 NAD(P)-dependent oxidoreductase compare
AMB_RS01655 -2.1 -1.0 hypothetical protein compare
AMB_RS03230 -2.1 -2.2 hypothetical protein compare
AMB_RS07745 -2.0 -2.4 disulfide bond formation protein B compare
AMB_RS13920 -2.0 -1.8 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS24240 -1.9 -1.3 hypothetical protein compare
AMB_RS08460 -1.9 -9.4 branched-chain amino acid ABC transporter permease compare
AMB_RS21750 -1.9 -1.7 DNA-binding response regulator compare
AMB_RS23195 -1.9 -4.0 ABC transporter ATP-binding protein compare
AMB_RS09095 -1.8 -3.7 hypothetical protein compare
AMB_RS22480 -1.8 -0.9 cell division ATP-binding protein FtsE compare
AMB_RS22010 -1.8 -1.6 hypothetical protein compare
AMB_RS00960 -1.8 -8.5 DNA-binding response regulator compare
AMB_RS20750 -1.8 -4.9 YbaB/EbfC family nucleoid-associated protein compare
AMB_RS12590 -1.7 -7.6 tetratricopeptide repeat protein compare
AMB_RS00990 -1.7 -3.5 hypothetical protein compare
AMB_RS03780 -1.6 -0.9 hypothetical protein compare
AMB_RS01325 -1.6 -2.2 phosphatase PAP2 family protein compare
AMB_RS20195 -1.6 -1.4 iron transporter MagA compare
AMB_RS05350 -1.6 -0.6 hypothetical protein compare
AMB_RS00010 -1.6 -1.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS07735 -1.6 -1.3 histidine phosphatase family protein compare
AMB_RS01080 -1.6 -1.6 exodeoxyribonuclease VII large subunit compare
AMB_RS13530 -1.5 -9.7 periplasmic nitrate reductase subunit alpha compare
AMB_RS11390 -1.5 -2.4 NYN domain-containing protein compare
AMB_RS17550 -1.5 -6.0 2-isopropylmalate synthase compare
AMB_RS13515 -1.5 -1.8 nitrate reductase cytochrome c-type subunit compare
AMB_RS11460 -1.5 -2.8 MFS transporter compare
AMB_RS07840 -1.5 -8.9 ABC transporter substrate-binding protein compare
AMB_RS02880 -1.5 -1.8 hypothetical protein compare
AMB_RS09970 -1.5 -0.3 NAD synthetase compare
AMB_RS01480 -1.4 -1.7 M48 family peptidase compare
AMB_RS21280 -1.4 -2.6 TVP38/TMEM64 family protein compare
AMB_RS12870 -1.4 -8.2 GNAT family N-acetyltransferase compare
AMB_RS16330 -1.4 -4.2 indolepyruvate oxidoreductase compare
AMB_RS08450 -1.4 -8.5 ABC transporter substrate-binding protein compare
AMB_RS13520 -1.4 -6.9 quinol dehydrogenase ferredoxin subunit NapH compare
AMB_RS06550 -1.4 -1.7 lysophospholipase compare
AMB_RS17450 -1.4 -0.6 DUF1987 domain-containing protein compare
AMB_RS00965 -1.4 -1.8 membrane protein compare
AMB_RS03405 -1.4 -1.3 LysR family transcriptional regulator compare
AMB_RS21345 -1.4 -1.3 DUF1501 domain-containing protein compare
AMB_RS03060 -1.4 -1.2 peptidoglycan editing factor PgeF compare
AMB_RS14455 -1.3 -1.7 ABC transporter ATP-binding protein compare
AMB_RS05505 -1.3 -3.9 GDP-mannose 4,6-dehydratase compare
AMB_RS13535 -1.3 -4.8 hypothetical protein compare
AMB_RS09120 -1.3 -2.7 ABC transporter ATP-binding protein compare
AMB_RS02235 -1.3 -2.2 methyltransferase domain-containing protein compare
AMB_RS08330 -1.3 -1.5 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS22580 -1.3 -7.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS07645 -1.2 -1.2 hypothetical protein compare
AMB_RS10120 -1.2 -1.4 DUF1476 domain-containing protein compare
AMB_RS00180 -1.2 -4.0 hypothetical protein compare
AMB_RS01430 -1.2 -1.7 hypothetical protein compare
AMB_RS12190 -1.2 -1.4 hypothetical protein compare
AMB_RS16280 -1.2 -2.3 5-formyltetrahydrofolate cyclo-ligase compare
AMB_RS04200 -1.2 -2.4 hypothetical protein compare
AMB_RS02730 -1.2 -1.6 hypothetical protein compare
AMB_RS22325 -1.2 -5.1 4Fe-4S binding domain-containing protein compare
AMB_RS06630 -1.2 -2.3 hypothetical protein compare
AMB_RS21955 -1.2 -1.4 hypothetical protein compare
AMB_RS24000 -1.2 -1.0 glycosyltransferase family 1 protein compare
AMB_RS16455 -1.2 -1.7 hypothetical protein compare
AMB_RS06005 -1.2 -1.2 hypothetical protein compare
AMB_RS07010 -1.2 -5.9 ATP-dependent helicase compare
AMB_RS21385 -1.2 -2.9 helix-turn-helix transcriptional regulator compare
AMB_RS07065 -1.1 -4.9 Crp/Fnr family transcriptional regulator compare
AMB_RS18850 -1.1 -2.4 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS05510 -1.1 -3.4 glycosyltransferase compare
AMB_RS15605 -1.1 -4.0 ChbG/HpnK family deacetylase compare
AMB_RS07075 -1.1 -6.4 cytochrome c-552 precursor compare
AMB_RS07105 -1.1 -1.9 Lrp/AsnC family transcriptional regulator compare
AMB_RS01795 -1.1 -3.2 DUF669 domain-containing protein compare
AMB_RS19255 -1.1 -5.3 excinuclease ABC subunit UvrB compare
AMB_RS05010 -1.1 -1.9 cation transporter compare
AMB_RS05625 -1.1 -1.9 phosphate ABC transporter ATP-binding protein compare
AMB_RS20020 -1.1 -1.1 cell division protein ZapE compare
AMB_RS12615 -1.1 -3.1 phytoene/squalene synthetase compare
AMB_RS22965 -1.1 -1.7 XRE family transcriptional regulator compare
AMB_RS05220 -1.0 -0.5 hypothetical protein compare
AMB_RS13675 -1.0 -2.1 DUF2800 domain-containing protein compare
AMB_RS08430 -1.0 -3.3 glutathione-disulfide reductase compare
AMB_RS21185 -1.0 -2.2 GntR family transcriptional regulator compare
AMB_RS14815 -1.0 -4.4 CbbQ/NirQ/NorQ/GpvN family protein compare
AMB_RS21210 -1.0 -3.2 hydroxyacylglutathione hydrolase compare
AMB_RS22775 -1.0 -1.2 penicillin-binding protein activator compare
AMB_RS12410 -1.0 -4.1 excinuclease ABC subunit UvrA compare
AMB_RS12385 -1.0 -2.6 alanine--glyoxylate aminotransferase family protein compare
AMB_RS06155 -1.0 -2.0 hypothetical protein compare
AMB_RS17975 -1.0 -1.7 biopolymer transporter ExbD compare
AMB_RS20585 -1.0 -1.7 DNA-binding protein compare
AMB_RS06135 -1.0 -1.8 MBL fold metallo-hydrolase compare
AMB_RS07095 -1.0 -5.6 protein nirF compare
AMB_RS23095 -1.0 -5.4 class I SAM-dependent methyltransferase compare
AMB_RS07120 -1.0 -3.8 heme d1 biosynthesis radical SAM protein NirJ compare
AMB_RS12560 -1.0 -1.1 penicillin-insensitive murein endopeptidase compare
AMB_RS00100 -1.0 -2.6 exodeoxyribonuclease III compare
AMB_RS12920 -1.0 -2.2 exo-beta-1,3-glucanase compare
AMB_RS14810 -1.0 -6.1 VWA domain-containing protein compare
AMB_RS13525 -1.0 -1.5 ferredoxin-type protein NapG compare
AMB_RS02715 -1.0 -2.1 glycerophosphodiester phosphodiesterase compare
AMB_RS13540 -1.0 -1.1 4Fe-4S dicluster domain-containing protein compare
AMB_RS02650 -1.0 -3.4 uroporphyrinogen-III C-methyltransferase compare
AMB_RS05500 -1.0 -2.8 GDP-mannose 4,6 dehydratase compare
AMB_RS07865 -1.0 -4.9 ATP-dependent chaperone ClpB compare
AMB_RS21445 -1.0 -4.1 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha compare
AMB_RS02660 -1.0 -2.6 SCO family protein compare
AMB_RS15530 -1.0 -3.5 cytochrome c4 compare
AMB_RS15630 -1.0 -3.2 AsmA family protein compare
AMB_RS07060 -1.0 -5.8 nitrite reductase compare
AMB_RS24365 -1.0 -2.8 hypothetical protein compare
AMB_RS22380 -1.0 -2.0 cytochrome C4 precursor compare
AMB_RS11000 -0.9 -2.5 N-formylglutamate amidohydrolase compare
AMB_RS15550 -0.9 -2.3 copper chaperone PCu(A)C compare
AMB_RS20805 -0.9 -1.4 isoprenoid biosynthesis protein ElbB compare
AMB_RS07115 -0.9 -1.7 Lrp/AsnC family transcriptional regulator compare
AMB_RS11300 -0.9 -4.8 adenylate/guanylate cyclase domain-containing protein compare
AMB_RS23205 -0.9 -2.9 glycosyl transferase compare
AMB_RS08360 -0.9 -1.6 hypothetical protein compare
AMB_RS14855 -0.9 -1.3 molybdate ABC transporter substrate-binding protein compare
AMB_RS16940 -0.9 -1.6 hypothetical protein compare
AMB_RS24615 -0.9 -1.6 IS3 family transposase compare
AMB_RS20870 -0.9 -0.7 gamma-glutamyl-gamma-aminobutyrate hydrolase compare
AMB_RS22575 -0.9 -5.7 GNAT family N-acetyltransferase compare
AMB_RS11180 -0.9 -2.1 rhodanese-like domain-containing protein compare
AMB_RS20120 -0.9 -1.6 VOC family protein compare
AMB_RS15500 -0.9 -2.1 ABC transporter ATP-binding protein compare
AMB_RS13765 -0.9 -3.6 hypothetical protein compare
AMB_RS06520 -0.9 -1.3 transcriptional regulator compare
AMB_RS13145 -0.9 -1.9 positive regulator of sigma E activity compare
AMB_RS15520 -0.9 -3.3 hypothetical protein compare
AMB_RS21320 -0.9 -2.2 alpha/beta hydrolase compare
AMB_RS11075 -0.9 -2.4 hypothetical protein compare
AMB_RS02705 -0.9 -1.5 ribbon-helix-helix protein, CopG family compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms