Experiment set2IT047 for Magnetospirillum magneticum AMB-1

Compare to:

30_an_initial_2

200 most important genes:

  gene name fitness t score description  
AMB_RS03045 -5.5 -2.1 hydrogen peroxide-inducible genes activator compare
AMB_RS17350 -4.9 -3.4 rubrerythrin compare
AMB_RS11640 -4.7 -3.2 UbiX family flavin prenyltransferase compare
AMB_RS22800 -4.4 -3.0 glutathione synthase compare
AMB_RS20350 -4.2 -13.1 aspartate 1-decarboxylase compare
AMB_RS17335 -4.1 -3.9 N-acyl-L-homoserine lactone synthetase compare
AMB_RS01190 -3.9 -6.4 UbiD family decarboxylase compare
AMB_RS16130 -3.8 -4.5 phosphoglycerate dehydrogenase compare
AMB_RS23155 -3.8 -1.4 two-component sensor histidine kinase compare
AMB_RS07660 -3.7 -1.6 hypothetical protein compare
AMB_RS11740 -3.6 -16.9 ubiquinone-binding protein compare
AMB_RS06370 -3.5 -3.4 DNA-binding response regulator compare
AMB_RS24350 -3.5 -1.7 hypothetical protein compare
AMB_RS22450 -3.5 -10.1 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS17945 -3.4 -1.8 hypothetical protein compare
AMB_RS24545 -3.4 -1.3 hypothetical protein compare
AMB_RS15295 -3.4 -2.4 iron donor protein CyaY compare
AMB_RS02525 -3.3 -12.8 U32 family peptidase compare
AMB_RS05910 -3.2 -1.2 hypothetical protein compare
AMB_RS17235 -3.2 -1.8 AsmA family protein compare
AMB_RS02835 -3.2 -2.9 two-component sensor histidine kinase compare
AMB_RS01330 -3.2 -6.4 glycosyltransferase family 39 protein compare
AMB_RS17625 -3.2 -15.5 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS11195 -3.1 -0.9 sulfate adenylyltransferase subunit 2 compare
AMB_RS02530 -3.1 -11.8 U32 family peptidase compare
AMB_RS16100 -3.0 -6.6 RNA polymerase sigma factor RpoH compare
AMB_RS00355 -3.0 -6.9 radical SAM protein compare
AMB_RS14035 -3.0 -6.9 endopeptidase La compare
AMB_RS21290 -2.9 -2.9 DUF4139 domain-containing protein compare
AMB_RS03230 -2.8 -2.6 hypothetical protein compare
AMB_RS21265 -2.8 -7.8 c-type cytochrome biogenesis protein CcmI compare
AMB_RS01265 -2.8 -1.2 LysR family transcriptional regulator compare
AMB_RS17540 -2.7 -1.8 potassium transporter KefB compare
AMB_RS05435 -2.7 -4.3 ABC transporter permease compare
AMB_RS09295 -2.7 -1.8 carboxymuconolactone decarboxylase family protein compare
AMB_RS19340 -2.6 -0.7 EamA family transporter compare
AMB_RS04630 -2.6 -0.6 tRNA-Met compare
AMB_RS22315 -2.6 -3.5 membrane protein compare
AMB_RS07700 -2.5 -1.2 hypothetical protein compare
AMB_RS02610 -2.5 -0.9 hypothetical protein compare
AMB_RS09095 -2.5 -4.4 hypothetical protein compare
AMB_RS19860 -2.5 -8.3 HlyC/CorC family transporter compare
AMB_RS21535 -2.4 -1.3 cyclic nucleotide-binding domain-containing protein compare
AMB_RS24240 -2.4 -1.5 hypothetical protein compare
AMB_RS00820 -2.4 -3.9 GDP-L-fucose synthase compare
AMB_RS13920 -2.4 -1.9 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS03780 -2.4 -1.0 hypothetical protein compare
AMB_RS13510 -2.3 -4.9 cytochrome C protein NapC compare
AMB_RS19880 -2.3 -4.0 site-specific tyrosine recombinase XerD compare
AMB_RS15610 -2.3 -8.0 hypothetical protein compare
AMB_RS00960 -2.3 -9.9 DNA-binding response regulator compare
AMB_RS17450 -2.3 -0.8 DUF1987 domain-containing protein compare
AMB_RS03060 -2.2 -1.9 peptidoglycan editing factor PgeF compare
AMB_RS01830 -2.2 -0.5 hypothetical protein compare
AMB_RS08455 -2.2 -9.3 branched-chain amino acid ABC transporter permease compare
AMB_RS22010 -2.2 -1.8 hypothetical protein compare
AMB_RS23195 -2.2 -4.3 ABC transporter ATP-binding protein compare
AMB_RS22480 -2.2 -0.9 cell division ATP-binding protein FtsE compare
AMB_RS21005 -2.2 -1.3 hypothetical protein compare
AMB_RS01910 -2.1 -0.9 head decoration protein compare
AMB_RS00075 -2.1 -1.5 P-II family nitrogen regulator compare
AMB_RS12785 -2.1 -4.0 murein transglycosylase compare
AMB_RS20145 -2.0 -1.2 chromosome segregation ATPase compare
AMB_RS08470 -2.0 -4.4 ABC transporter ATP-binding protein compare
AMB_RS22280 -2.0 -13.2 hypothetical protein compare
AMB_RS19790 -2.0 -3.0 NAD(P)-dependent oxidoreductase compare
AMB_RS07105 -2.0 -2.8 Lrp/AsnC family transcriptional regulator compare
AMB_RS07745 -2.0 -2.5 disulfide bond formation protein B compare
AMB_RS19230 -2.0 -3.4 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS21455 -2.0 -4.4 XRE family transcriptional regulator compare
AMB_RS08465 -1.9 -7.8 ABC transporter ATP-binding protein compare
AMB_RS02880 -1.9 -2.0 hypothetical protein compare
AMB_RS01655 -1.9 -0.9 hypothetical protein compare
AMB_RS01540 -1.9 -1.4 peptidase M23 compare
AMB_RS08460 -1.9 -9.1 branched-chain amino acid ABC transporter permease compare
AMB_RS20665 -1.8 -1.2 class I SAM-dependent methyltransferase compare
AMB_RS16455 -1.8 -2.3 hypothetical protein compare
AMB_RS14175 -1.8 -1.9 COQ9 family protein compare
AMB_RS12590 -1.8 -8.6 tetratricopeptide repeat protein compare
AMB_RS17550 -1.7 -7.2 2-isopropylmalate synthase compare
AMB_RS21955 -1.7 -1.4 hypothetical protein compare
AMB_RS03110 -1.7 -1.4 membrane protein compare
AMB_RS21750 -1.7 -1.5 DNA-binding response regulator compare
AMB_RS03205 -1.7 -2.1 DNA recombination/repair protein RecA compare
AMB_RS07070 -1.7 -1.6 Crp/Fnr family transcriptional regulator compare
AMB_RS13525 -1.6 -2.0 ferredoxin-type protein NapG compare
AMB_RS16080 -1.6 -1.4 tRNA-Glu compare
AMB_RS12920 -1.6 -3.1 exo-beta-1,3-glucanase compare
AMB_RS08330 -1.6 -2.1 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS00965 -1.6 -2.0 membrane protein compare
AMB_RS07840 -1.6 -8.7 ABC transporter substrate-binding protein compare
AMB_RS13530 -1.6 -8.5 periplasmic nitrate reductase subunit alpha compare
AMB_RS01080 -1.6 -1.8 exodeoxyribonuclease VII large subunit compare
AMB_RS20750 -1.6 -7.1 YbaB/EbfC family nucleoid-associated protein compare
AMB_RS22005 -1.5 -1.2 HD domain-containing protein compare
AMB_RS21385 -1.5 -4.2 helix-turn-helix transcriptional regulator compare
AMB_RS00695 -1.5 -1.2 gfo/Idh/MocA family oxidoreductase compare
AMB_RS05220 -1.5 -0.6 hypothetical protein compare
AMB_RS13540 -1.5 -1.4 4Fe-4S dicluster domain-containing protein compare
AMB_RS05350 -1.5 -0.5 hypothetical protein compare
AMB_RS16035 -1.5 -1.4 L(+)-tartrate dehydratase subunit alpha compare
AMB_RS01325 -1.5 -1.9 phosphatase PAP2 family protein compare
AMB_RS00010 -1.5 -1.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS12870 -1.4 -8.5 GNAT family N-acetyltransferase compare
AMB_RS08450 -1.4 -8.8 ABC transporter substrate-binding protein compare
AMB_RS21280 -1.4 -2.5 TVP38/TMEM64 family protein compare
AMB_RS06630 -1.4 -3.9 hypothetical protein compare
AMB_RS03725 -1.4 -4.0 DNA helicase II compare
AMB_RS04885 -1.4 -1.3 hypothetical protein compare
AMB_RS11390 -1.4 -2.2 NYN domain-containing protein compare
AMB_RS09970 -1.4 -0.3 NAD synthetase compare
AMB_RS14855 -1.3 -1.6 molybdate ABC transporter substrate-binding protein compare
AMB_RS01430 -1.3 -1.9 hypothetical protein compare
AMB_RS24000 -1.3 -1.4 glycosyltransferase family 1 protein compare
AMB_RS18850 -1.3 -2.3 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS13515 -1.3 -1.5 nitrate reductase cytochrome c-type subunit compare
AMB_RS02550 -1.3 -1.9 DNA polymerase III compare
AMB_RS00180 -1.3 -4.6 hypothetical protein compare
AMB_RS22325 -1.2 -4.7 4Fe-4S binding domain-containing protein compare
AMB_RS12615 -1.2 -3.0 phytoene/squalene synthetase compare
AMB_RS22965 -1.2 -2.2 XRE family transcriptional regulator compare
AMB_RS12385 -1.2 -3.4 alanine--glyoxylate aminotransferase family protein compare
AMB_RS10640 -1.2 -3.4 endolytic transglycosylase MltG compare
AMB_RS02500 -1.2 -1.6 hypothetical protein compare
AMB_RS08360 -1.2 -2.3 hypothetical protein compare
AMB_RS17240 -1.2 -2.4 OmpA family protein compare
AMB_RS01415 -1.2 -0.9 rhodanese-like domain-containing protein compare
AMB_RS14565 -1.2 -1.9 sensor histidine kinase compare
AMB_RS22580 -1.2 -6.8 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS16330 -1.2 -2.9 indolepyruvate oxidoreductase compare
AMB_RS23095 -1.2 -6.7 class I SAM-dependent methyltransferase compare
AMB_RS21185 -1.2 -2.6 GntR family transcriptional regulator compare
AMB_RS15215 -1.2 -3.1 methyltransferase domain-containing protein compare
AMB_RS13520 -1.2 -5.8 quinol dehydrogenase ferredoxin subunit NapH compare
AMB_RS05505 -1.2 -3.6 GDP-mannose 4,6-dehydratase compare
AMB_RS11155 -1.1 -1.9 DNA-binding response regulator compare
AMB_RS15605 -1.1 -3.8 ChbG/HpnK family deacetylase compare
AMB_RS17355 -1.1 -1.6 membrane protein compare
AMB_RS13145 -1.1 -1.8 positive regulator of sigma E activity compare
AMB_RS00080 -1.1 -1.7 ammonium transporter compare
AMB_RS02695 -1.1 -0.8 undecaprenyl-diphosphatase 1 compare
AMB_RS12190 -1.1 -1.2 hypothetical protein compare
AMB_RS07865 -1.1 -5.8 ATP-dependent chaperone ClpB compare
AMB_RS06005 -1.1 -1.1 hypothetical protein compare
AMB_RS13170 -1.1 -0.7 electron transport complex subunit RsxG compare
AMB_RS11500 -1.1 -1.4 XRE family transcriptional regulator compare
AMB_RS17365 -1.1 -5.6 acriflavine resistance protein B compare
AMB_RS10120 -1.1 -1.2 DUF1476 domain-containing protein compare
AMB_RS07645 -1.1 -1.2 hypothetical protein compare
AMB_RS14815 -1.0 -4.3 CbbQ/NirQ/NorQ/GpvN family protein compare
AMB_RS13360 -1.0 -2.9 thiol:disulfide oxidoreductase compare
AMB_RS10725 -1.0 -2.1 hypothetical protein compare
AMB_RS23170 -1.0 -1.8 hypothetical protein compare
AMB_RS12710 -1.0 -3.4 segregation/condensation protein A compare
AMB_RS07110 -1.0 -1.2 Lrp/AsnC family transcriptional regulator compare
AMB_RS07065 -1.0 -3.8 Crp/Fnr family transcriptional regulator compare
AMB_RS14440 -1.0 -1.6 hypothetical protein compare
AMB_RS14810 -1.0 -7.0 VWA domain-containing protein compare
AMB_RS12410 -1.0 -4.1 excinuclease ABC subunit UvrA compare
AMB_RS22235 -1.0 -1.6 RNase adaptor protein RapZ compare
AMB_RS05510 -1.0 -2.9 glycosyltransferase compare
AMB_RS08255 -1.0 -0.7 hypothetical protein compare
AMB_RS02520 -1.0 -3.3 hypothetical protein compare
AMB_RS13275 -1.0 -0.9 response regulator compare
AMB_RS17045 -1.0 -1.5 sulfurtransferase TusD compare
AMB_RS22665 -1.0 -2.0 lipopolysaccharide heptosyltransferase family protein compare
AMB_RS07075 -1.0 -5.1 cytochrome c-552 precursor compare
AMB_RS19255 -0.9 -4.6 excinuclease ABC subunit UvrB compare
AMB_RS13900 -0.9 -2.1 efflux RND transporter periplasmic adaptor subunit compare
AMB_RS07115 -0.9 -1.9 Lrp/AsnC family transcriptional regulator compare
AMB_RS07180 -0.9 -1.2 membrane protein compare
AMB_RS07095 -0.9 -4.9 protein nirF compare
AMB_RS21120 -0.9 -1.8 DUF4337 domain-containing protein compare
AMB_RS02705 -0.9 -1.8 ribbon-helix-helix protein, CopG family compare
AMB_RS14185 -0.9 -2.5 HAMP domain-containing protein compare
AMB_RS02730 -0.9 -1.4 hypothetical protein compare
AMB_RS13180 -0.9 -1.6 protein rnfH compare
AMB_RS17980 -0.9 -1.7 biopolymer transporter ExbD compare
AMB_RS06755 -0.9 -1.5 hypothetical protein compare
AMB_RS07060 -0.9 -5.4 nitrite reductase compare
AMB_RS02650 -0.9 -3.0 uroporphyrinogen-III C-methyltransferase compare
AMB_RS15500 -0.9 -2.5 ABC transporter ATP-binding protein compare
AMB_RS06295 -0.9 -3.5 LysR family transcriptional regulator compare
AMB_RS11180 -0.9 -2.3 rhodanese-like domain-containing protein compare
AMB_RS13585 -0.9 -2.1 alpha/beta hydrolase compare
AMB_RS21215 -0.9 -3.1 methyltransferase domain-containing protein compare
AMB_RS24305 -0.9 -2.9 hypothetical protein compare
AMB_RS14520 -0.9 -1.0 1,4-beta-N-acetylmuramidase compare
AMB_RS00990 -0.9 -2.1 hypothetical protein compare
AMB_RS20805 -0.9 -1.4 isoprenoid biosynthesis protein ElbB compare
AMB_RS02235 -0.9 -1.4 methyltransferase domain-containing protein compare
AMB_RS04850 -0.9 -1.6 hypothetical protein compare
AMB_RS02715 -0.9 -1.9 glycerophosphodiester phosphodiesterase compare
AMB_RS21320 -0.9 -2.1 alpha/beta hydrolase compare
AMB_RS18100 -0.8 -1.8 DUF2249 domain-containing protein compare
AMB_RS13535 -0.8 -2.6 hypothetical protein compare
AMB_RS03405 -0.8 -0.7 LysR family transcriptional regulator compare
AMB_RS05500 -0.8 -2.5 GDP-mannose 4,6 dehydratase compare
AMB_RS24615 -0.8 -1.6 IS3 family transposase compare
AMB_RS07010 -0.8 -3.5 ATP-dependent helicase compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms