Experiment set2IT047 for Agrobacterium fabrum C58

Compare to:

D-Galacturonic Acid monohydrate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Atu3138 -7.2 -11.0 hypothetical protein compare
Atu3140 -5.5 -10.6 5-dehydro-4-deoxyglucarate dehydratase conserved
Atu3143 -5.5 -14.6 hypothetical protein conserved
Atu3139 -5.5 -13.7 hypothetical protein compare
Atu3135 -4.9 -15.9 ABC transporter permease conserved
Atu3137 -4.9 -11.8 C4-dicarboxylate-binding protein conserved
Atu3136 -4.3 -6.5 ABC transporter permease conserved
Atu4364 -3.4 -12.7 LacI family transcriptional regulator compare
Atu2035 -3.2 -12.3 acetolactate synthase, small subunit compare
Atu3343 -3.0 -9.7 trehalose utilization-like protein compare
Atu0981 -2.8 -8.7 glutamate-ammonia-ligase adenylyltransferase compare
Atu0770 -2.8 -8.0 cytochrome C oxidase assembly protein compare
Atu4743 -2.6 -9.5 LacI family transcriptional regulator compare
Atu3342 -2.4 -7.2 trehalose utilization-like protein compare
Atu0771 -2.3 -8.5 cytochrome c oxidase subunit III compare
Atu3912 -2.2 -8.3 hypothetical protein compare
Atu4451 -2.2 -11.3 mannitol 2-dehydrogenase compare
Atu4194 -2.0 -11.9 oligopeptide ABC transporter permease compare
Atu0535 -1.9 -5.3 hypothetical protein compare
Atu1285 -1.8 -9.0 metal dependent hydrolase compare
Atu4824 -1.8 -9.4 IclR family transcriptional regulator compare
Atu1770 -1.8 -10.9 glutamine synthetase compare
Atu3142 -1.8 -10.8 5-keto-4-deoxyuronate isomerase compare
Atu3141 -1.8 -10.4 2-deoxy-D-gluconate 3-dehydrogenase compare
Atu3971 -1.8 -12.5 dihydroxy-acid dehydratase compare
Atu4195 -1.7 -12.9 oligopeptide ABC transporter ATPase compare
Atu3913 -1.7 -5.7 biotin carboxylase compare
Atu3356 -1.7 -13.5 malic enzyme compare
Atu5075 -1.7 -7.1 GntR family transcriptional regulator compare
Atu4193 -1.6 -8.2 oligopeptide ABC transporter permease compare
Atu0663 -1.6 -10.1 hypothetical protein compare
Atu4599 -1.6 -10.7 IclR family transcriptional regulator compare
Atu3147 -1.6 -10.0 oxidoreductase compare
Atu4192 -1.5 -11.4 oligopeptide ABC transporter substrate-binding protein compare
Atu3453 -1.5 -5.1 isomerase/lactonizing enzyme compare
Atu4077 -1.5 -8.1 glycogen branching protein compare
Atu4825 -1.4 -5.2 dehydrogenase compare
Atu3075 -1.3 -5.8 TetR family transcriptional regulator compare
Atu3280 -1.3 -6.1 GntR family transcriptional regulator compare
Atu2131 -1.2 -5.3 hypothetical protein compare
Atu4034 +1.1 8.3 two component sensor kinase compare
Atu4035 +1.2 7.8 two component response regulator compare
Atu4033 +1.2 10.8 sugar ABC transporter substrate-binding protein compare
Atu3128 +1.2 9.6 di-trans,poly-cis-decaprenylcistransferase compare
Atu0559 +1.2 9.5 hypothetical protein compare
Atu4532 +1.3 7.7 shikimate 5-dehydrogenase compare
Atu0554 +1.3 7.9 flagellar basal-body rod protein compare
Atu0548 +1.4 9.6 flagellar L-ring protein precursor compare
Atu0582 +1.4 11.8 flagellar biosynthetic protein FLIR compare
Atu0558 +1.4 10.5 flagellar basal body rod protein compare
Atu0563 +1.4 10.7 flagellar motor switch protein FliG compare
Atu0568 +1.4 10.0 hypothetical protein compare
Atu0579 +1.4 10.6 hook formation protein compare
Atu1888 +1.5 12.2 two component sensor kinase compare
Atu4190 +2.0 11.4 calcium-binding protein, regucalcin conserved
Atu3144 +2.4 15.7 GntR family transcriptional regulator compare
Atu3115 +2.6 16.8 TetR family transcriptional regulator compare
Atu4191 +2.8 22.3 GntR family transcriptional regulator compare
Atu4530 +3.4 18.1 TetR family transcriptional regulator compare


Specific phenotypes for carbon source D-Galacturonic Acid monohydrate across organisms