Experiment set2IT046 for Magnetospirillum magneticum AMB-1

Compare to:

30_an_initial_1

200 most important genes:

  gene name fitness t score description  
AMB_RS03045 -5.6 -2.1 hydrogen peroxide-inducible genes activator compare
AMB_RS11640 -4.8 -3.3 UbiX family flavin prenyltransferase compare
AMB_RS17235 -4.8 -2.1 AsmA family protein compare
AMB_RS21290 -4.6 -2.9 DUF4139 domain-containing protein compare
AMB_RS22800 -4.6 -3.1 glutathione synthase compare
AMB_RS17350 -4.5 -4.2 rubrerythrin compare
AMB_RS01190 -4.5 -5.3 UbiD family decarboxylase compare
AMB_RS20350 -4.4 -13.4 aspartate 1-decarboxylase compare
AMB_RS17335 -4.2 -4.0 N-acyl-L-homoserine lactone synthetase compare
AMB_RS15295 -4.1 -2.2 iron donor protein CyaY compare
AMB_RS23155 -3.9 -1.5 two-component sensor histidine kinase compare
AMB_RS07660 -3.8 -1.7 hypothetical protein compare
AMB_RS02525 -3.8 -16.4 U32 family peptidase compare
AMB_RS06370 -3.7 -3.8 DNA-binding response regulator compare
AMB_RS24350 -3.6 -1.8 hypothetical protein compare
AMB_RS24545 -3.5 -1.3 hypothetical protein compare
AMB_RS22450 -3.4 -16.3 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS11740 -3.4 -17.0 ubiquinone-binding protein compare
AMB_RS05910 -3.4 -1.3 hypothetical protein compare
AMB_RS02530 -3.2 -11.0 U32 family peptidase compare
AMB_RS21535 -3.2 -1.6 cyclic nucleotide-binding domain-containing protein compare
AMB_RS11195 -3.2 -0.9 sulfate adenylyltransferase subunit 2 compare
AMB_RS00355 -3.1 -8.0 radical SAM protein compare
AMB_RS01330 -3.1 -6.9 glycosyltransferase family 39 protein compare
AMB_RS17625 -3.1 -16.5 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS22480 -3.0 -0.9 cell division ATP-binding protein FtsE compare
AMB_RS01265 -2.9 -1.3 LysR family transcriptional regulator compare
AMB_RS00695 -2.9 -1.9 gfo/Idh/MocA family oxidoreductase compare
AMB_RS22280 -2.9 -17.3 hypothetical protein compare
AMB_RS07745 -2.9 -3.1 disulfide bond formation protein B compare
AMB_RS09295 -2.8 -1.9 carboxymuconolactone decarboxylase family protein compare
AMB_RS19545 -2.7 -3.0 elongation factor 4 compare
AMB_RS21455 -2.7 -6.9 XRE family transcriptional regulator compare
AMB_RS19340 -2.7 -0.8 EamA family transporter compare
AMB_RS02610 -2.7 -1.0 hypothetical protein compare
AMB_RS16100 -2.7 -5.4 RNA polymerase sigma factor RpoH compare
AMB_RS05435 -2.7 -4.2 ABC transporter permease compare
AMB_RS03060 -2.7 -2.3 peptidoglycan editing factor PgeF compare
AMB_RS21265 -2.7 -6.6 c-type cytochrome biogenesis protein CcmI compare
AMB_RS08455 -2.7 -11.6 branched-chain amino acid ABC transporter permease compare
AMB_RS07700 -2.7 -1.3 hypothetical protein compare
AMB_RS19860 -2.7 -8.5 HlyC/CorC family transporter compare
AMB_RS04630 -2.7 -0.6 tRNA-Met compare
AMB_RS23195 -2.6 -5.1 ABC transporter ATP-binding protein compare
AMB_RS00075 -2.6 -1.8 P-II family nitrogen regulator compare
AMB_RS19880 -2.5 -4.4 site-specific tyrosine recombinase XerD compare
AMB_RS17945 -2.5 -2.1 hypothetical protein compare
AMB_RS19790 -2.5 -4.2 NAD(P)-dependent oxidoreductase compare
AMB_RS15610 -2.5 -9.0 hypothetical protein compare
AMB_RS03780 -2.5 -1.1 hypothetical protein compare
AMB_RS17540 -2.5 -1.7 potassium transporter KefB compare
AMB_RS16130 -2.4 -5.0 phosphoglycerate dehydrogenase compare
AMB_RS22005 -2.4 -1.3 HD domain-containing protein compare
AMB_RS13510 -2.4 -5.0 cytochrome C protein NapC compare
AMB_RS17450 -2.4 -0.9 DUF1987 domain-containing protein compare
AMB_RS00820 -2.4 -3.8 GDP-L-fucose synthase compare
AMB_RS12785 -2.4 -4.1 murein transglycosylase compare
AMB_RS01910 -2.3 -1.0 head decoration protein compare
AMB_RS01830 -2.3 -0.5 hypothetical protein compare
AMB_RS00965 -2.3 -2.9 membrane protein compare
AMB_RS08460 -2.3 -10.9 branched-chain amino acid ABC transporter permease compare
AMB_RS03230 -2.3 -2.4 hypothetical protein compare
AMB_RS22315 -2.2 -4.2 membrane protein compare
AMB_RS20145 -2.2 -1.3 chromosome segregation ATPase compare
AMB_RS03110 -2.2 -1.7 membrane protein compare
AMB_RS03205 -2.2 -2.4 DNA recombination/repair protein RecA compare
AMB_RS00010 -2.2 -1.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS12560 -2.2 -2.6 penicillin-insensitive murein endopeptidase compare
AMB_RS09095 -2.2 -2.8 hypothetical protein compare
AMB_RS13540 -2.1 -1.6 4Fe-4S dicluster domain-containing protein compare
AMB_RS02725 -2.1 -1.8 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS14035 -2.1 -4.9 endopeptidase La compare
AMB_RS01655 -2.0 -1.0 hypothetical protein compare
AMB_RS24240 -2.0 -1.5 hypothetical protein compare
AMB_RS08470 -2.0 -5.0 ABC transporter ATP-binding protein compare
AMB_RS12590 -1.9 -8.9 tetratricopeptide repeat protein compare
AMB_RS13920 -1.9 -1.8 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS21955 -1.9 -1.5 hypothetical protein compare
AMB_RS14455 -1.8 -2.0 ABC transporter ATP-binding protein compare
AMB_RS21280 -1.8 -2.9 TVP38/TMEM64 family protein compare
AMB_RS03725 -1.7 -5.5 DNA helicase II compare
AMB_RS08465 -1.7 -8.1 ABC transporter ATP-binding protein compare
AMB_RS21385 -1.7 -4.8 helix-turn-helix transcriptional regulator compare
AMB_RS18850 -1.7 -2.8 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS13525 -1.7 -2.3 ferredoxin-type protein NapG compare
AMB_RS19230 -1.7 -2.7 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS01325 -1.7 -2.2 phosphatase PAP2 family protein compare
AMB_RS08450 -1.7 -9.1 ABC transporter substrate-binding protein compare
AMB_RS11380 -1.7 -1.6 hemerythrin compare
AMB_RS06630 -1.6 -3.6 hypothetical protein compare
AMB_RS05350 -1.6 -0.6 hypothetical protein compare
AMB_RS02835 -1.6 -1.7 two-component sensor histidine kinase compare
AMB_RS01430 -1.6 -2.3 hypothetical protein compare
AMB_RS22965 -1.6 -3.1 XRE family transcriptional regulator compare
AMB_RS05220 -1.6 -0.7 hypothetical protein compare
AMB_RS14620 -1.6 -2.4 ArsR family transcriptional regulator compare
AMB_RS12190 -1.6 -2.0 hypothetical protein compare
AMB_RS14520 -1.6 -2.1 1,4-beta-N-acetylmuramidase compare
AMB_RS07840 -1.6 -9.4 ABC transporter substrate-binding protein compare
AMB_RS21750 -1.6 -1.5 DNA-binding response regulator compare
AMB_RS17550 -1.6 -7.1 2-isopropylmalate synthase compare
AMB_RS21185 -1.6 -3.2 GntR family transcriptional regulator compare
AMB_RS01080 -1.6 -1.8 exodeoxyribonuclease VII large subunit compare
AMB_RS07070 -1.6 -1.5 Crp/Fnr family transcriptional regulator compare
AMB_RS08330 -1.6 -2.0 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS16080 -1.6 -1.3 tRNA-Glu compare
AMB_RS20750 -1.5 -5.9 YbaB/EbfC family nucleoid-associated protein compare
AMB_RS06155 -1.5 -3.1 hypothetical protein compare
AMB_RS11390 -1.5 -2.4 NYN domain-containing protein compare
AMB_RS14855 -1.5 -2.0 molybdate ABC transporter substrate-binding protein compare
AMB_RS13520 -1.5 -7.6 quinol dehydrogenase ferredoxin subunit NapH compare
AMB_RS24000 -1.5 -1.5 glycosyltransferase family 1 protein compare
AMB_RS09970 -1.5 -0.3 NAD synthetase compare
AMB_RS24680 -1.5 -1.7 hypothetical protein compare
AMB_RS03405 -1.5 -1.4 LysR family transcriptional regulator compare
AMB_RS00085 -1.4 -1.2 aspartate aminotransferase compare
AMB_RS13170 -1.4 -0.9 electron transport complex subunit RsxG compare
AMB_RS22235 -1.4 -1.6 RNase adaptor protein RapZ compare
AMB_RS07010 -1.4 -5.4 ATP-dependent helicase compare
AMB_RS12410 -1.4 -5.7 excinuclease ABC subunit UvrA compare
AMB_RS05505 -1.4 -4.4 GDP-mannose 4,6-dehydratase compare
AMB_RS14175 -1.4 -1.3 COQ9 family protein compare
AMB_RS20120 -1.4 -2.4 VOC family protein compare
AMB_RS15550 -1.3 -2.8 copper chaperone PCu(A)C compare
AMB_RS19115 -1.3 -2.1 hypothetical protein compare
AMB_RS13530 -1.3 -8.6 periplasmic nitrate reductase subunit alpha compare
AMB_RS07180 -1.3 -1.8 membrane protein compare
AMB_RS13515 -1.3 -1.6 nitrate reductase cytochrome c-type subunit compare
AMB_RS10120 -1.3 -1.5 DUF1476 domain-containing protein compare
AMB_RS12870 -1.3 -7.5 GNAT family N-acetyltransferase compare
AMB_RS17240 -1.3 -2.6 OmpA family protein compare
AMB_RS02650 -1.3 -5.1 uroporphyrinogen-III C-methyltransferase compare
AMB_RS13360 -1.3 -3.6 thiol:disulfide oxidoreductase compare
AMB_RS01540 -1.3 -1.2 peptidase M23 compare
AMB_RS22325 -1.3 -4.5 4Fe-4S binding domain-containing protein compare
AMB_RS06005 -1.2 -1.2 hypothetical protein compare
AMB_RS07065 -1.2 -5.0 Crp/Fnr family transcriptional regulator compare
AMB_RS22665 -1.2 -2.2 lipopolysaccharide heptosyltransferase family protein compare
AMB_RS20195 -1.2 -1.2 iron transporter MagA compare
AMB_RS02660 -1.2 -2.9 SCO family protein compare
AMB_RS07105 -1.2 -1.9 Lrp/AsnC family transcriptional regulator compare
AMB_RS00960 -1.2 -5.5 DNA-binding response regulator compare
AMB_RS15985 -1.2 -2.1 recombinase family protein compare
AMB_RS13535 -1.2 -3.5 hypothetical protein compare
AMB_RS13585 -1.2 -2.5 alpha/beta hydrolase compare
AMB_RS07075 -1.2 -5.9 cytochrome c-552 precursor compare
AMB_RS14565 -1.2 -2.0 sensor histidine kinase compare
AMB_RS22580 -1.1 -6.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS05510 -1.1 -3.2 glycosyltransferase compare
AMB_RS11460 -1.1 -2.2 MFS transporter compare
AMB_RS05500 -1.1 -3.1 GDP-mannose 4,6 dehydratase compare
AMB_RS04850 -1.1 -2.2 hypothetical protein compare
AMB_RS08400 -1.1 -2.6 ATP-sensitive inward rectifier potassium channel 10 compare
AMB_RS20805 -1.1 -1.8 isoprenoid biosynthesis protein ElbB compare
AMB_RS13275 -1.1 -1.0 response regulator compare
AMB_RS22490 -1.1 -1.7 YdcF family protein compare
AMB_RS24245 -1.1 -1.6 hypothetical protein compare
AMB_RS02730 -1.1 -1.5 hypothetical protein compare
AMB_RS14815 -1.1 -4.6 CbbQ/NirQ/NorQ/GpvN family protein compare
AMB_RS21005 -1.0 -0.8 hypothetical protein compare
AMB_RS20830 -1.0 -1.6 peptide-methionine (R)-S-oxide reductase compare
AMB_RS01605 -1.0 -1.1 aspartate aminotransferase family protein compare
AMB_RS08255 -1.0 -0.8 hypothetical protein compare
AMB_RS21025 -1.0 -6.8 DUF3422 domain-containing protein compare
AMB_RS16330 -1.0 -2.5 indolepyruvate oxidoreductase compare
AMB_RS11300 -1.0 -5.3 adenylate/guanylate cyclase domain-containing protein compare
AMB_RS24365 -1.0 -2.9 hypothetical protein compare
AMB_RS14810 -1.0 -7.7 VWA domain-containing protein compare
AMB_RS09120 -1.0 -2.2 ABC transporter ATP-binding protein compare
AMB_RS05405 -1.0 -0.8 4Fe-4S dicluster domain-containing protein compare
AMB_RS13715 -1.0 -2.2 hypothetical protein compare
AMB_RS11000 -1.0 -2.7 N-formylglutamate amidohydrolase compare
AMB_RS11180 -1.0 -2.3 rhodanese-like domain-containing protein compare
AMB_RS07735 -1.0 -1.0 histidine phosphatase family protein compare
AMB_RS16375 -1.0 -1.5 MFS transporter compare
AMB_RS02695 -1.0 -0.7 undecaprenyl-diphosphatase 1 compare
AMB_RS20020 -1.0 -1.0 cell division protein ZapE compare
AMB_RS08430 -1.0 -3.2 glutathione-disulfide reductase compare
AMB_RS22760 -1.0 -1.2 ribonuclease PH compare
AMB_RS15605 -1.0 -3.6 ChbG/HpnK family deacetylase compare
AMB_RS05085 -1.0 -1.4 hemerythrin compare
AMB_RS07060 -0.9 -6.2 nitrite reductase compare
AMB_RS14800 -0.9 -0.8 hypothetical protein compare
AMB_RS04200 -0.9 -2.2 hypothetical protein compare
AMB_RS22575 -0.9 -5.9 GNAT family N-acetyltransferase compare
AMB_RS23095 -0.9 -4.9 class I SAM-dependent methyltransferase compare
AMB_RS21120 -0.9 -1.8 DUF4337 domain-containing protein compare
AMB_RS00080 -0.9 -1.9 ammonium transporter compare
AMB_RS13765 -0.9 -3.7 hypothetical protein compare
AMB_RS14095 -0.9 -3.0 DUF4131 domain-containing protein compare
AMB_RS19255 -0.9 -4.3 excinuclease ABC subunit UvrB compare
AMB_RS17845 -0.9 -2.7 hypothetical protein compare
AMB_RS23055 -0.9 -1.6 methylated-DNA--protein-cysteine methyltransferase compare
AMB_RS23205 -0.9 -3.1 glycosyl transferase compare
AMB_RS02235 -0.9 -1.7 methyltransferase domain-containing protein compare
AMB_RS11500 -0.9 -1.2 XRE family transcriptional regulator compare
AMB_RS16280 -0.9 -1.8 5-formyltetrahydrofolate cyclo-ligase compare
AMB_RS02705 -0.9 -1.5 ribbon-helix-helix protein, CopG family compare
AMB_RS13270 -0.9 -2.7 chemotaxis protein CheX compare
AMB_RS15400 -0.9 -1.9 GntR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms