Experiment set2IT046 for Escherichia coli BW25113

Compare to:

LB with Benzalkonium Chloride 0.004 mg/ml

Genes with specific phenotypes:

  gene name fitness t score description  
b0842 cmr -4.3 -7.1 multidrug efflux system protein (NCBI) compare
b2174 b2174 -3.9 -7.4 orf, hypothetical protein (VIMSS) compare
b4159 yjeP -3.7 -13.3 predicted mechanosensitive channel (NCBI) compare
b0441 ppiD -3.6 -7.6 peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) compare
b4472 yhdP -3.5 -13.5 conserved membrane protein, predicted transporter (NCBI) compare
b3472 b3472 -3.5 -7.7 orf, hypothetical protein (VIMSS) compare
b0008 talB -3.4 -9.2 transaldolase B (NCBI) compare
b3996 nudC -3.4 -8.9 NADH pyrophosphatase (NCBI) compare
b0877 ybjX -3.3 -6.7 hypothetical protein (NCBI) compare
b1249 cls -3.2 -6.3 cardiolipin synthetase (NCBI) compare
b3197 kdsD -3.1 -8.4 D-arabinose 5-phosphate isomerase (NCBI) compare
b3363 ppiA -3.1 -7.1 peptidyl-prolyl cis-trans isomerase A (rotamase A) (NCBI) compare
b2040 rfbD -3.0 -9.8 dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) compare
b4383 deoB -3.0 -7.2 phosphopentomutase (NCBI) compare
b2749 ygbE -3.0 -7.0 conserved inner membrane protein (NCBI) compare
b4396 rob -2.9 -7.8 DNA-binding transcriptional activator (NCBI) compare
b3150 yraP -2.8 -5.3 hypothetical protein (NCBI) compare
b2038 rfbC -2.8 -7.8 dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) compare
b0950 pqiA -2.7 -6.6 paraquat-inducible membrane protein A (NCBI) compare
b3149 yraO -2.7 -5.3 DnaA initiator-associating factor for replication initiation (NCBI) compare
b3617 kbl -2.6 -6.2 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) compare
b0209 yafD -2.5 -6.0 hypothetical protein (NCBI) compare
b0952 ymbA -2.5 -5.8 conserved protein (RefSeq) compare
b3147 yraM -2.4 -10.8 hypothetical protein (NCBI) compare
b4289 fecC -2.4 -10.4 KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) compare
b4288 fecD -2.4 -8.2 KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) compare
b3955 yijP -2.3 -13.1 conserved inner membrane protein (NCBI) compare
b3396 mrcA -2.3 -14.6 peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) compare
b0055 djlA -2.3 -7.0 Dna-J like membrane chaperone protein (NCBI) conserved
b2625 yfjI -2.3 -6.2 CP4-57 prophage; predicted protein (NCBI) compare
b4208 cycA -2.2 -8.5 D-alanine/D-serine/glycine transporter (NCBI) compare
b4222 ytfP -2.2 -5.1 hypothetical protein (NCBI) compare
b2796 sdaC -2.0 -9.5 predicted serine transporter (NCBI) compare
b3624 rfaZ -1.8 -6.0 lipopolysaccharide core biosynthesis protein (NCBI) compare
b0951 pqiB -1.7 -7.7 paraquat-inducible protein B (NCBI) compare
b3116 tdcC -1.7 -6.1 L-threonine/L-serine transporter (NCBI) compare
b3785 wzzE -1.7 -8.7 putative transport protein (VIMSS) compare
b3498 prlC -1.6 -8.1 oligopeptidase A (NCBI) compare
b4384 deoD -1.6 -5.4 purine nucleoside phosphorylase (NCBI) compare
b2558 mltF -1.6 -6.3 predicted periplasmic binding protein/transglycosylase (RefSeq) conserved
b3803 hemX -1.5 -7.8 predicted uroporphyrinogen III methylase (NCBI) compare
b3869 glnL -1.5 -5.9 sensory histidine kinase in two-component regulatory system with GlnG (NCBI) compare
b2041 rfbB -1.5 -9.0 dTDP-glucose 4,6 dehydratase, NAD(P)-binding (NCBI) compare
b2742 nlpD -1.5 -5.8 predicted outer membrane lipoprotein (NCBI) compare
b3918 cdh -1.5 -5.2 CDP-diacylglycerol pyrophosphatase (NCBI) compare
b4290 fecB -1.4 -5.4 citrate-dependent iron transport, periplasmic protein (VIMSS) compare
b1047 mdoC -1.3 -7.2 glucans biosynthesis protein (NCBI) compare
b3622 rfaL -1.2 -5.7 O-antigen ligase (NCBI) compare
b1216 chaA +1.1 5.4 calcium/sodium:proton antiporter (NCBI) compare
b4138 dcuA +1.1 6.1 C4-dicarboxylate antiporter (NCBI) compare
b3802 hemY +1.1 7.5 predicted protoheme IX synthesis protein (NCBI) compare
b3666 uhpT +1.1 5.8 sugar phosphate antiporter (NCBI) compare
b0449 mdlB +1.2 6.1 fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) compare
b3401 yrfI +1.3 6.5 orf, hypothetical protein (VIMSS) compare
b1805 fadD +1.4 5.9 acyl-CoA synthase (NCBI) compare
b3431 glgX +1.4 6.9 glycogen debranching enzyme (NCBI) compare
b2587 kgtP +1.4 5.2 alpha-ketoglutarate transporter (NCBI) compare
b2037 rfbX +1.5 8.3 predicted polisoprenol-linked O-antigen transporter (NCBI) compare
b3166 truB +1.5 5.7 tRNA pseudouridine synthase B (NCBI) compare
b3892 fdoI +1.5 6.6 formate dehydrogenase-O, cytochrome b556 subunit (NCBI) compare
b2685 emrA +1.6 7.3 multidrug efflux system (NCBI) compare
b1238 tdk +1.6 6.0 thymidine kinase (NCBI) compare
b4371 rsmC +1.7 6.7 16S ribosomal RNA m2G1207 methyltransferase (NCBI) compare
b0399 phoB +1.7 7.6 DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) (NCBI) compare
b3893 fdoH +1.7 10.3 formate dehydrogenase-O, Fe-S subunit (NCBI) compare
b3895 fdhD +1.7 7.8 formate dehydrogenase accessory protein (NCBI) compare
b3591 selA +1.7 11.4 selenocysteine synthase (NCBI) compare
b3673 emrD +1.8 10.6 2-module integral membrane pump; multidrug resistance (VIMSS) compare
b3891 fdhE +1.8 9.5 formate dehydrogenase accessory protein FdhE (NCBI) compare
b3590 selB +1.8 12.0 selenocysteinyl-tRNA-specific translation factor (NCBI) compare
b0846 ybjK +1.9 6.5 predicted DNA-binding transcriptional regulator (NCBI) compare
b3894 fdoG +1.9 14.3 formate dehydrogenase-O, large subunit (NCBI) compare
b3423 glpR +2.0 11.0 DNA-binding transcriptional repressor (NCBI) compare
b3416 malQ +2.1 14.8 4-alpha-glucanotransferase (amylomaltase) (NCBI) compare
b2113 mrp +2.1 9.0 putative ATPase (VIMSS) compare
b3417 malP +2.2 10.8 maltodextrin phosphorylase (NCBI) compare
b1764 selD +2.2 7.2 selenophosphate synthetase (NCBI) compare
b0826 moeB +2.3 10.7 molybdopterin biosynthesis protein MoeB (NCBI) compare
b2502 ppx +2.3 10.6 exopolyphosphatase (NCBI) compare
b3071 yqjI +2.3 8.8 predicted transcriptional regulator (NCBI) compare
b4391 yjjK +2.4 13.1 fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) compare
b2909 ygfB +2.6 11.6 orf, hypothetical protein (VIMSS) compare
b1629 rsxC +3.2 9.6 electron transport complex protein RnfC (NCBI) compare
b0955 ycbZ +3.6 15.8 predicted peptidase (NCBI) compare
b3260 dusB +3.6 7.1 tRNA-dihydrouridine synthase B (NCBI) compare
b3095 yqjA +3.7 13.8 conserved inner membrane protein (NCBI) compare
b2214 yojL +4.0 18.7 predicted thiamine biosynthesis lipoprotein (NCBI) compare
b1632 rsxE +4.0 23.0 NADH-ubiquinone oxidoreductase (NCBI) compare
b3780 rhlB +4.1 27.1 ATP-dependent RNA helicase (NCBI) conserved
b2938 speA +4.6 30.4 arginine decarboxylase (NCBI) conserved


Specific phenotypes for stress Benzalkonium Chloride across organisms