Experiment set2IT044 for Agrobacterium fabrum C58

Compare to:

D-Glucosamine Hydrochloride carbon source

200 most important genes:

  gene name fitness t score description  
Atu1308 -7.2 -7.0 aspartate carbamoyl transferase catalytic subunit compare
Atu2606 -6.9 -6.8 transcriptional regulator, GntR family conserved
Atu1844 -6.9 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu0790 -6.6 -7.9 hypothetical protein conserved
Atu0432 -6.6 -9.1 O-succinylhomoserine sulfhydrylase compare
Atu2718 -6.5 -7.7 homoserine O-succinyltransferase compare
Atu0400 -6.4 -6.2 orotate phosphoribosyltransferase compare
Atu0099 -6.3 -12.2 prephenate dehydratase compare
Atu2289 -6.3 -18.9 anthranilate synthase component I and II compare
Atu1750 -6.2 -3.7 phosphoribosyl c-AMP cyclohydrolase compare
Atu1205 -6.2 -13.8 threonine dehydratase compare
Atu2036 -6.2 -15.4 acetolactate synthase III, large subunit compare
Atu2709 -6.1 -18.9 3-isopropylmalate dehydratase, large subunit compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu3706 -6.1 -10.1 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -6.0 -5.9 phosphoserine phosphatase compare
Atu0679 -6.0 -7.1 ATP phosphoribosyltransferase compare
Atu2650 -6.0 -13.9 glycerol-3-phosphate dehydrogenase compare
Atu0678 -5.9 -4.1 histidyl-tRNA synthetase compare
Atu0399 -5.8 -7.0 dihydroorotase compare
Atu2726 -5.8 -23.8 pyruvate carboxylase compare
Atu1850 -5.7 -6.8 phosphoribosylformylglycinamidine synthetase II compare
Atu2607 -5.7 -14.8 glucosamine--fructose-6-phosphate aminotransferase conserved
Atu2264 -5.7 -16.1 2-isopropylmalate synthase compare
Atu1687 -5.7 -10.7 anthranilate phosphoribosyltransferase compare
Atu2791 -5.6 -10.1 3-isopropylmalate dehydrogenase compare
Atu0298 -5.6 -8.6 orotidine 5 compare
Atu1075 -5.4 -8.9 amidophosphoribosyltransferase compare
Atu1688 -5.3 -8.2 indole-3-glycerol-phosphate synthase compare
Atu2609 -5.3 -10.7 transcriptional regulator, ROK family compare
Atu2790 -5.1 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu1588 -5.1 -11.5 homoserine dehydrogenase compare
Atu0038 -5.1 -7.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0537 -5.1 -6.9 histidinol dehydrogenase compare
Atu1307 -5.1 -8.1 dihydroorotase compare
Atu0043 -5.0 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu0041 -4.9 -3.3 glutamine amidotransferase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu1845 -4.7 -5.5 phosphoribosylformylglycinamidine synthase I compare
Atu1030 -4.6 -3.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1141 -4.5 -9.4 Phosphoribosylglycinamide synthetase compare
Atu0486 -4.5 -7.9 dihydroorotate dehydrogenase compare
Atu0647 -4.4 -8.4 phosphoribosylamine--glycine ligase compare
Atu3469 -4.3 -4.1 phosphoglyceromutase compare
Atu3755 -4.3 -7.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3482 -4.2 -8.4 pantoate--beta-alanine ligase compare
Atu3754 -4.2 -6.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4446 -4.2 -14.7 hypothetical protein compare
Atu0017 -4.1 -4.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3739 -4.1 -3.3 phosphoglycerate kinase compare
Atu3885 -4.0 -13.1 inositol monophosphatase compare
Atu3162 -3.9 -15.9 LacI family transcriptional regulator compare
Atu0030 -3.8 -2.7 phosphocarrier protein HPr compare
Atu1140 -3.5 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1456 -3.5 -14.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2015 -3.3 -16.0 aminotransferase compare
Atu0641 -3.1 -5.7 hypothetical protein compare
Atu3783 -3.1 -18.2 glutamate synthase subunit beta compare
Atu0040 -2.9 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3483 -2.7 -6.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0401 -2.7 -7.0 fructokinase compare
Atu2747 -2.6 -15.4 hypothetical protein compare
Atu3784 -2.4 -18.9 glutamate synthase large subunit compare
Atu4711 -2.4 -6.7 two component sensor kinase compare
Atu1454 -2.3 -8.2 siroheme synthase compare
Atu6098 -2.3 -1.3 transcriptional regulator, HTH family compare
Atu0590 -2.3 -11.8 transcriptional regulator repressor compare
Atu1589 -2.2 -6.5 aminotransferase, class I compare
Atu4685 -2.1 -12.0 LacI family transcriptional regulator compare
Atu2155 -2.0 -15.0 methionine synthase compare
Atu1359 -2.0 -1.8 dnaK deletion suppressor protein compare
Atu4773 -2.0 -2.7 two component response regulator compare
Atu0769 -1.9 -2.7 protoheme IX farnesyltransferase compare
Atu1455 -1.9 -2.5 hypothetical protein compare
Atu0031 -1.9 -2.2 PTS system, IIA component compare
Atu3574 -1.8 -9.6 xylose ABC transporter ATPase compare
Atu3576 -1.7 -9.4 xylose ABC transporter substrate-binding protein compare
Atu3731 -1.6 -7.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu5125 -1.6 -5.5 GntR family transcriptional regulator compare
Atu4702 -1.6 -8.6 GntR family transcriptional regulator compare
Atu3575 -1.5 -6.7 xylose ABC transporter permease compare
Atu1686 -1.5 -11.2 peptidyl-prolyl cis-trans isomerse D compare
Atu1311 -1.5 -4.8 acetyltransferase compare
Atu2207 -1.4 -1.9 two component sensor kinase compare
Atu0501 -1.4 -8.9 acyl-CoA dehydrogenase compare
Atu0598 -1.4 -6.4 phosphogluconate dehydratase compare
Atu0322 -1.4 -5.3 enoyl CoA hydratase compare
Atu0422 -1.4 -2.1 ABC transporter, membrane spanning protein compare
Atu0846 -1.4 -3.7 transcriptional regulator, MarR family compare
Atu2205 -1.4 -4.5 transcriptional regulator, MarR family compare
Atu4674 -1.3 -7.3 GntR family transcriptional regulator compare
Atu1457 -1.3 -2.0 hypothetical protein compare
Atu0503 -1.3 -9.0 enoyl-CoA hydratase compare
Atu3908 -1.3 -7.7 GntR family transcriptional regulator compare
Atu0502 -1.3 -4.8 acetyl-CoA acetyltransferase compare
Atu0434 -1.3 -3.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0981 -1.2 -7.2 glutamate-ammonia-ligase adenylyltransferase compare
Atu3712 -1.2 -1.8 hypothetical protein compare
Atu2787 -1.2 -1.3 hypothetical protein compare
Atu2548 -1.2 -8.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2633 -1.2 -2.1 RhtB family transporter compare
Atu3290 -1.2 -7.7 phosphomethylpyrimidine kinase compare
Atu2349 -1.2 -2.4 hypothetical protein compare
Atu2113 -1.2 -3.8 N-acetylmuramoyl-L-alanine amidase compare
Atu4514 -1.2 -5.1 RpiR family transcriptional regulator compare
Atu0225 -1.1 -1.2 hypothetical protein compare
Atu5540 -1.1 -1.2 hypothetical protein compare
Atu2800 -1.1 -2.3 precorrin-3B C17-methyltransferase compare
Atu4098 -1.1 -7.0 quinolinate synthetase compare
Atu1242 -1.1 -5.0 cytochrome oxidase assembly factor compare
Atu1902 -1.1 -3.5 transketolase compare
Atu3730 -1.1 -1.4 hypothetical protein compare
Atu0107 -1.1 -1.4 hypothetical protein compare
Atu0300 -1.1 -5.4 methyltransferase compare
Atu3144 -1.1 -5.4 GntR family transcriptional regulator compare
Atu0361 -1.1 -2.6 transcriptional regulator compare
Atu2123 -1.1 -3.6 methylenetetrahydrofolate reductase compare
Atu2238 -1.1 -4.9 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1286 -1.1 -4.2 hypothetical protein compare
Atu1774 -1.1 -6.6 ABC transporter, substrate binding protein (peptide) compare
Atu0895 -1.0 -2.7 ABC transporter, substrate binding protein compare
Atu1462 -1.0 -7.7 glycine cleavage system protein P2 compare
Atu0101 -1.0 -3.0 cytochrome c compare
Atu4530 -1.0 -5.4 TetR family transcriptional regulator compare
Atu1464 -1.0 -3.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu4317 -1.0 -3.3 TetR family transcriptional regulator compare
Atu0115 -1.0 -1.2 hypothetical protein compare
Atu1463 -1.0 -4.9 glycine cleavage system component H compare
Atu1739 -1.0 -3.2 permease compare
Atu0029 -1.0 -3.7 S-adenosylhomocysteine hydrolase compare
Atu0976 -0.9 -3.1 cycL protein compare
Atu1546 -0.9 -4.5 transcriptional regulator, MerR family compare
Atu0346 -0.9 -3.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0354 -0.9 -1.3 ferric uptake regulator compare
Atu0771 -0.9 -4.1 cytochrome c oxidase subunit III compare
Atu3289 -0.9 -4.0 thiamine-phosphate pyrophosphorylase compare
Atu1219 -0.9 -1.0 hypothetical protein compare
Atu0770 -0.9 -4.0 cytochrome C oxidase assembly protein compare
Atu3794 -0.9 -4.8 FadR family transcriptional regulator compare
Atu0141 -0.9 -1.5 cytochrome O ubiquinol oxidase subunit I compare
Atu4364 -0.9 -5.3 LacI family transcriptional regulator compare
Atu0190 -0.9 -4.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2569 -0.9 -6.0 thiamine biosynthesis protein compare
Atu3288 -0.8 -4.0 hydroxyethylthiazole kinase compare
Atu3485 -0.8 -5.9 short chain dehydrogenase compare
Atu0767 -0.8 -3.4 cytochrome c oxidase subunit II compare
Atu2821 -0.8 -2.4 transcriptional regulator, GntR family compare
Atu2346 -0.8 -5.3 ABC transporter, membrane spanning protein (sugar) compare
Atu3240 -0.8 -5.3 ROK family transcriptional regulator compare
Atu3340 -0.8 -4.5 trehalose/maltose ABC transporter permease compare
Atu0405 -0.8 -6.0 long-chain-fatty-acid-CoA-ligase compare
Atu0842 -0.8 -1.8 hypothetical protein compare
Atu3697 -0.8 -2.7 ATP-dependent protease LA 2 compare
Atu0792 -0.8 -4.1 hypothetical protein compare
Atu2807 -0.8 -4.8 cob(I)alamin adenosyltransferase compare
Atu3613 -0.8 -1.6 hypothetical protein compare
Atu4099 -0.8 -3.6 hypothetical protein compare
Atu2809 -0.8 -4.2 cobalamin biosynthesis protein compare
Atu2347 -0.8 -4.3 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu0189 -0.8 -2.4 ABC transporter, membrane spanning protein (peptide) compare
Atu5464 -0.8 -4.7 IclR family transcriptional regulator compare
Atu2808 -0.7 -4.7 cobyric acid synthase compare
Atu1952 -0.7 -1.0 hypothetical protein compare
Atu8177 -0.7 -2.1 hypothetical protein compare
Atu0768 -0.7 -5.3 cytochrome-c oxidase chain I compare
Atu4232 -0.7 -2.7 GntR family transcriptional regulator compare
Atu4187 -0.7 -1.4 tRNA-Met compare
Atu1364 -0.7 -3.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3913 -0.7 -4.1 biotin carboxylase compare
Atu1074 -0.7 -4.8 NAD/NADP dependent oxidoreductase compare
Atu1163 -0.7 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3740 -0.7 -4.7 fructose bisphosphate aldolase compare
Atu6197 -0.7 -2.6 agrocinopine phosphodiesterase compare
Atu0357 -0.7 -4.9 phosphate starvation inducible protein compare
Atu5075 -0.7 -4.4 GntR family transcriptional regulator compare
Atu3468 -0.7 -0.9 hypothetical protein compare
Atu3910 -0.7 -3.7 LamB/YcsF family protein compare
Atu3075 -0.7 -3.7 TetR family transcriptional regulator compare
Atu3997 -0.7 -4.8 biotin synthetase compare
Atu2740 -0.7 -4.0 transcriptional regulator, GntR family compare
Atu2249 -0.7 -0.9 hypothetical protein compare
Atu2376 -0.7 -0.5 hypothetical protein compare
Atu2795 -0.7 -3.8 cobalamin biosynthetic protein compare
Atu4096 -0.7 -4.1 nicotinate-nucleotide pyrophosphorylase compare
Atu2724 -0.7 -5.0 MFS permease compare
Atu2532 -0.7 -2.3 transcriptional regulator, MarR family compare
Atu4373 -0.7 -3.9 LacI family transcriptional regulator compare
Atu1634 -0.7 -1.4 hypothetical protein compare
Atu1620 -0.7 -5.0 triosephosphate isomerase compare
Atu3963 -0.7 -3.2 GntR family transcriptional regulator compare
Atu3280 -0.6 -4.2 GntR family transcriptional regulator compare
Atu4824 -0.6 -3.4 IclR family transcriptional regulator compare
Atu6114 -0.6 -1.1 hypothetical protein compare
Atu0606 -0.6 -1.4 hypothetical protein compare
Atu4825 -0.6 -4.3 dehydrogenase compare
Atu0977 -0.6 -3.1 serine protease DO-like protease compare
Atu0421 -0.6 -1.1 ABC transporter, membrane spanning protein compare
Atu4161 -0.6 -1.3 hypothetical protein compare
Atu0008 -0.6 -3.1 hypothetical protein compare
Atu4505 -0.6 -4.6 LacI family transcriptional regulator compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source D-Glucosamine Hydrochloride in Agrobacterium fabrum C58

For carbon source D-Glucosamine Hydrochloride across organisms