Experiment set2IT043 for Agrobacterium fabrum C58

Compare to:

D-Sorbitol carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -5.5 -5.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu0401 -5.4 -6.4 fructokinase compare
Atu3754 -5.2 -7.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2289 -5.1 -8.5 anthranilate synthase component I and II compare
Atu2791 -5.0 -4.9 3-isopropylmalate dehydrogenase compare
Atu1687 -5.0 -7.6 anthranilate phosphoribosyltransferase compare
Atu2036 -4.9 -7.5 acetolactate synthase III, large subunit compare
Atu1205 -4.8 -7.4 threonine dehydratase compare
Atu0099 -4.8 -7.3 prephenate dehydratase compare
Atu0298 -4.6 -3.2 orotidine 5 compare
Atu2709 -4.6 -12.3 3-isopropylmalate dehydratase, large subunit compare
Atu2726 -4.6 -14.7 pyruvate carboxylase compare
Atu0679 -4.5 -3.1 ATP phosphoribosyltransferase compare
Atu1850 -4.5 -4.3 phosphoribosylformylglycinamidine synthetase II compare
Atu0486 -4.3 -4.2 dihydroorotate dehydrogenase compare
Atu1141 -4.3 -5.1 Phosphoribosylglycinamide synthetase compare
Atu3706 -4.2 -6.4 D-3-phosphoglycerate dehydrogenase compare
Atu2264 -4.2 -10.1 2-isopropylmalate synthase compare
Atu1075 -4.2 -5.0 amidophosphoribosyltransferase compare
Atu1588 -4.2 -5.7 homoserine dehydrogenase compare
Atu0432 -4.1 -7.4 O-succinylhomoserine sulfhydrylase compare
Atu1845 -4.1 -3.7 phosphoribosylformylglycinamidine synthase I compare
Atu2040 -4.1 -2.8 phosphoserine phosphatase compare
Atu3885 -4.0 -6.0 inositol monophosphatase compare
Atu1308 -3.9 -5.0 aspartate carbamoyl transferase catalytic subunit compare
Atu0399 -3.9 -2.7 dihydroorotase compare
Atu3707 -3.8 -2.7 phosphoserine aminotransferase compare
Atu0537 -3.8 -2.6 histidinol dehydrogenase compare
Atu1307 -3.8 -5.2 dihydroorotase compare
Atu2790 -3.7 -2.4 3-isopropylmalate dehydratase, small subunit compare
Atu2718 -3.6 -6.5 homoserine O-succinyltransferase compare
Atu1359 -3.6 -1.7 dnaK deletion suppressor protein compare
Atu0876 -3.6 -2.5 superoxide dismutase compare
Atu0678 -3.5 -3.4 histidyl-tRNA synthetase compare
Atu0400 -3.5 -4.2 orotate phosphoribosyltransferase compare
Atu3739 -3.5 -3.1 phosphoglycerate kinase compare
Atu1688 -3.4 -3.3 indole-3-glycerol-phosphate synthase compare
Atu3483 -3.3 -5.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3755 -3.3 -3.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0038 -3.3 -4.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0647 -3.2 -3.1 phosphoribosylamine--glycine ligase compare
Atu2015 -3.1 -8.5 aminotransferase compare
Atu0641 -3.0 -4.1 hypothetical protein compare
Atu1844 -3.0 -3.5 Phosphoribosylformylglycinamidine synthetase compare
Atu0017 -2.8 -2.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4318 -2.8 -8.9 xylitol dehydrogenase conserved
Atu0434 -2.8 -3.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3482 -2.7 -6.1 pantoate--beta-alanine ligase compare
Atu1140 -2.7 -2.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1457 -2.6 -3.6 hypothetical protein compare
Atu3783 -2.6 -11.5 glutamate synthase subunit beta compare
Atu0043 -2.6 -1.8 imidazoleglycerol-phosphate dehydratase compare
Atu0041 -2.5 -1.7 glutamine amidotransferase compare
Atu2650 -2.4 -7.8 glycerol-3-phosphate dehydrogenase compare
Atu1030 -2.4 -1.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0030 -2.4 -1.9 phosphocarrier protein HPr compare
Atu0039 -2.4 -1.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu3784 -2.4 -16.6 glutamate synthase large subunit compare
Atu1456 -2.1 -8.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3183 -2.0 -1.3 hypothetical protein compare
Atu4096 -2.0 -6.6 nicotinate-nucleotide pyrophosphorylase compare
Atu2747 -1.9 -9.4 hypothetical protein compare
Atu3731 -1.9 -5.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu1454 -1.9 -5.5 siroheme synthase compare
Atu4097 -1.8 -7.9 L-aspartate oxidase compare
Atu4098 -1.8 -9.4 quinolinate synthetase compare
Atu1748 -1.8 -5.6 NIFU-like protein compare
Atu4613 -1.8 -11.2 glycosyltransferase compare
Atu4297 -1.8 -8.0 AraC family transcriptional regulator compare
Atu2442 -1.8 -2.3 hypothetical protein compare
Atu4451 -1.7 -8.9 mannitol 2-dehydrogenase conserved
Atu4296 -1.7 -10.2 dehydrogenase compare
Atu5173 -1.7 -1.6 dehydrogenase compare
Atu4617 -1.7 -7.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2155 -1.7 -11.0 methionine synthase compare
Atu0346 -1.6 -3.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1455 -1.6 -3.9 hypothetical protein compare
Atu1589 -1.5 -5.6 aminotransferase, class I compare
Atu4614 -1.5 -5.3 glycosyltransferase compare
Atu6189 -1.4 -0.9 protein secretion chaperone compare
Atu0040 -1.4 -0.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3469 -1.4 -1.5 phosphoglyceromutase compare
Atu2472 -1.3 -1.0 hypothetical protein compare
Atu4514 -1.3 -3.1 RpiR family transcriptional regulator compare
Atu1446 -1.3 -2.0 two component response regulator compare
Atu0768 -1.3 -7.0 cytochrome-c oxidase chain I compare
Atu4616 -1.3 -1.2 dTDP-4-dehydrorhamnose reductase compare
Atu5046 -1.3 -1.9 hypothetical protein compare
Atu1242 -1.3 -5.1 cytochrome oxidase assembly factor compare
Atu4166 -1.3 -2.0 UDP-glucose 4-epimerase compare
Atu3468 -1.2 -1.0 hypothetical protein compare
Atu4618 -1.2 -5.6 dTDP-rhamnose-3,5-epimerase compare
Atu0770 -1.2 -5.1 cytochrome C oxidase assembly protein compare
Atu4609 -1.2 -7.2 glycosyltransferase compare
Atu3598 -1.2 -1.7 thiol:disulfide interchange protein compare
Atu2733 -1.2 -4.2 hypothetical protein compare
Atu1028 -1.2 -1.9 hypothetical protein compare
Atu1714 -1.2 -1.5 exonuclease III compare
Atu4685 -1.2 -5.4 LacI family transcriptional regulator compare
Atu4608 -1.2 -7.7 hypothetical protein compare
Atu0101 -1.2 -4.3 cytochrome c compare
Atu2532 -1.2 -3.0 transcriptional regulator, MarR family compare
Atu5517 -1.2 -1.6 hypothetical protein compare
Atu4615 -1.2 -6.1 glucose-1-phosphate thymidylyltransferase compare
Atu6107 -1.1 -2.6 hypothetical protein compare
Atu0792 -1.1 -3.2 hypothetical protein compare
Atu2235 -1.1 -1.9 hypothetical protein compare
Atu5167 -1.1 -2.5 type IV secretion protein AvhB6 compare
Atu0062 -1.1 -5.7 transcriptional regulator, ROK family compare
Atu1686 -1.1 -7.4 peptidyl-prolyl cis-trans isomerse D compare
Atu6114 -1.0 -1.7 hypothetical protein compare
Atu3342 -1.0 -3.7 trehalose utilization-like protein compare
Atu0611 -1.0 -2.9 ABC transporter, membrane spanning protein compare
Atu0812 -1.0 -1.9 hypothetical protein compare
Atu0357 -1.0 -5.4 phosphate starvation inducible protein compare
Atu0842 -1.0 -1.3 hypothetical protein compare
Atu0189 -1.0 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu3121 -1.0 -1.0 cold shock protein compare
Atu1074 -1.0 -4.8 NAD/NADP dependent oxidoreductase compare
Atu1546 -0.9 -3.5 transcriptional regulator, MerR family compare
Atu1694 -0.9 -2.4 hypothetical protein compare
Atu4075 -0.9 -4.5 glycogen synthase compare
Atu0777 -0.9 -0.7 hypothetical protein compare
Atu2187 -0.9 -2.5 transcriptional regulator, ArsR family compare
Atu2710 -0.9 -3.4 hypothetical protein compare
Atu5142 -0.9 -1.0 hypothetical protein compare
Atu0771 -0.9 -4.3 cytochrome c oxidase subunit III compare
Atu4702 -0.9 -3.4 GntR family transcriptional regulator compare
Atu3467 -0.9 -1.7 hypothetical protein compare
Atu2376 -0.8 -0.9 hypothetical protein compare
Atu2238 -0.8 -3.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4840 -0.8 -2.9 hypothetical protein compare
Atu1464 -0.8 -3.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu3647 -0.8 -2.3 hypothetical protein compare
Atu1573 -0.8 -1.1 hypothetical protein compare
Atu1286 -0.8 -1.8 hypothetical protein compare
Atu2462 -0.8 -1.6 hypothetical protein compare
Atu3667 -0.8 -2.0 aspartate alpha-decarboxylase compare
Atu3280 -0.8 -3.4 GntR family transcriptional regulator compare
Atu6086 -0.8 -2.5 ABC transporter, membrane spanning protein (nitrate/sulfonate) compare
Atu0598 -0.8 -3.7 phosphogluconate dehydratase compare
Atu2205 -0.8 -2.5 transcriptional regulator, MarR family compare
Atu1462 -0.8 -5.0 glycine cleavage system protein P2 compare
Atu1983 -0.8 -2.4 hypothetical protein compare
Atu2484 -0.8 -1.1 hypothetical protein compare
Atu0590 -0.7 -2.9 transcriptional regulator repressor compare
Atu2335 -0.7 -0.9 hypothetical protein compare
Atu8118 -0.7 -3.1 putative universal stress protein compare
Atu2800 -0.7 -1.3 precorrin-3B C17-methyltransferase compare
Atu6128 -0.7 -2.3 Conjugative pilin processing protease compare
Atu1705 -0.7 -2.0 SEC-independent protein translocase protein compare
Atu2120 -0.7 -3.0 O-methyltransferase compare
Atu0767 -0.7 -2.7 cytochrome c oxidase subunit II compare
Atu3878 -0.7 -3.8 transcriptional regulator compare
Atu1372 -0.7 -2.4 hypothetical protein compare
Atu1812 -0.7 -1.8 hypothetical protein compare
Atu1847 -0.7 -1.3 hypothetical protein compare
Atu0190 -0.7 -2.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu8054 -0.7 -0.3 hypothetical protein compare
Atu1699 -0.7 -2.3 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu1604 -0.7 -4.1 poly-beta-hydroxybutyrate synthase compare
Atu0188 -0.7 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu1774 -0.7 -3.2 ABC transporter, substrate binding protein (peptide) compare
Atu4610 -0.7 -4.2 sugar nucleotide epimerase/dehydratase compare
Atu3343 -0.7 -2.6 trehalose utilization-like protein compare
Atu2491 -0.7 -1.7 hypothetical protein compare
Atu0722 -0.7 -2.6 hypothetical protein compare
Atu1154 -0.7 -2.1 hypothetical protein compare
Atu5467 -0.7 -1.4 hypothetical protein compare
Atu0496 -0.7 -1.8 hypothetical protein compare
Atu6160 -0.7 -1.8 conserved hypothetical protein compare
Atu0977 -0.7 -2.2 serine protease DO-like protease compare
Atu0419 -0.7 -1.1 two component sensor kinase compare
Atu6165 -0.7 -0.4 hypothetical protein compare
Atu0973 -0.7 -3.2 cycH protein compare
Atu2239 -0.6 -1.0 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu6045 -0.6 -0.7 replication protein C compare
Atu0630 -0.6 -1.3 hypothetical protein compare
Atu3337 -0.6 -3.4 LacI family transcriptional regulator compare
Atu3075 -0.6 -3.6 TetR family transcriptional regulator compare
Atu1782 -0.6 -2.2 hypothetical protein compare
Atu1518 -0.6 -1.5 transcriptional regulator, Fur family compare
Atu2368 -0.6 -0.8 hypothetical protein compare
Atu8096 -0.6 -0.9 hypothetical protein compare
Atu1366 -0.6 -2.9 hypothetical protein compare
Atu0115 -0.6 -0.6 hypothetical protein compare
Atu3665 -0.6 -3.6 short-chain dehydrogenase compare
Atu0769 -0.6 -0.9 protoheme IX farnesyltransferase compare
Atu3963 -0.6 -2.6 GntR family transcriptional regulator compare
Atu3311 -0.6 -4.1 phosphomannose isomerase compare
Atu3759 -0.6 -0.8 hypothetical protein compare
Atu0228 -0.6 -2.5 hypothetical protein compare
Atu5043 -0.6 -1.4 hypothetical protein compare
Atu4443 -0.6 -3.3 hypothetical protein compare
Atu2183 -0.6 -2.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu8035 -0.6 -0.9 hypothetical protein compare
Atu5147 -0.6 -1.8 Mg(2+) transport ATPase compare
Atu2237 -0.6 -2.2 cytochrome c1 compare
Atu0533 -0.6 -1.8 putative inhibitor of septum formation compare
Atu3353 -0.6 -2.9 mannose-1-phosphate guanylyltransferase compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source D-Sorbitol in Agrobacterium fabrum C58

For carbon source D-Sorbitol across organisms