Experiment set2IT042 for Variovorax sp. OAS795

Compare to:

Adenine hydrochloride hydrate carbon source

200 most important genes:

  gene name fitness t score description  
ABID97_RS23225 -5.6 -16.8 glutamate synthase-related protein compare
ABID97_RS09180 -4.9 -3.4 DNA polymerase I compare
ABID97_RS06575 -4.8 -6.9 trehalose-phosphatase compare
ABID97_RS25015 -4.4 -3.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABID97_RS16595 -4.3 -3.6 CbiX/SirB N-terminal domain-containing protein compare
ABID97_RS22210 -4.1 -8.3 allantoinase PuuE compare
ABID97_RS22220 -4.1 -5.5 ArgE/DapE family deacylase compare
ABID97_RS17600 -3.9 -2.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABID97_RS17590 -3.9 -11.7 endopeptidase La compare
ABID97_RS23220 -3.9 -2.2 glutamate synthase subunit beta compare
ABID97_RS22200 -3.9 -7.0 hydroxyisourate hydrolase compare
ABID97_RS02600 -3.8 -5.3 homoserine O-acetyltransferase compare
ABID97_RS05275 -3.8 -2.6 anthranilate phosphoribosyltransferase compare
ABID97_RS03805 -3.7 -2.2 ATP-binding protein compare
ABID97_RS01565 -3.6 -5.7 DNA starvation/stationary phase protection protein compare
ABID97_RS22215 -3.6 -5.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase compare
ABID97_RS00585 -3.5 -12.1 TlpA disulfide reductase family protein compare
ABID97_RS10910 -3.5 -3.6 MoaD/ThiS family protein compare
ABID97_RS22315 -3.5 -2.1 LysR family transcriptional regulator compare
ABID97_RS20705 -3.5 -7.4 molybdopterin adenylyltransferase compare
ABID97_RS22120 -3.4 -11.9 xanthine dehydrogenase molybdopterin binding subunit compare
ABID97_RS07920 -3.4 -4.1 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
ABID97_RS23320 -3.3 -8.0 c-type cytochrome biogenesis protein CcsB compare
ABID97_RS23325 -3.3 -7.6 cytochrome c biogenesis protein ResB compare
ABID97_RS23425 -3.2 -2.8 tRNA-Pro compare
ABID97_RS02420 -3.1 -9.1 protealysin inhibitor emfourin compare
ABID97_RS08435 -3.1 -2.1 phosphoribosylanthranilate isomerase compare
ABID97_RS22125 -3.0 -8.6 xanthine dehydrogenase small subunit compare
ABID97_RS10905 -3.0 -5.5 gephyrin-like molybdotransferase Glp compare
ABID97_RS10885 -3.0 -4.9 pyridoxal phosphate-dependent aminotransferase compare
ABID97_RS08425 -3.0 -5.7 tryptophan synthase subunit alpha compare
ABID97_RS14755 -2.9 -9.4 'GTP 3',8-cyclase MoaA' pseudo=_no_value transl_table=11 compare
ABID97_RS07380 -2.9 -5.9 S41 family peptidase compare
ABID97_RS05250 -2.9 -9.1 anthranilate synthase component I compare
ABID97_RS07375 -2.8 -11.0 molybdopterin-synthase adenylyltransferase MoeB compare
ABID97_RS04500 -2.7 -1.9 HPr(Ser) kinase/phosphatase compare
ABID97_RS10590 -2.7 -10.8 nicotinate phosphoribosyltransferase compare
ABID97_RS14095 -2.7 -9.3 PAS domain S-box protein compare
ABID97_RS08445 -2.7 -10.7 FimV/HubP family polar landmark protein compare
ABID97_RS20615 -2.7 -5.5 uroporphyrinogen-III C-methyltransferase compare
ABID97_RS14665 -2.6 -3.1 UvrD-helicase domain-containing protein compare
ABID97_RS08440 -2.6 -7.6 tRNA pseudouridine(38-40) synthase TruA compare
ABID97_RS05280 -2.6 -2.5 indole-3-glycerol phosphate synthase TrpC compare
ABID97_RS10210 -2.6 -1.5 TfoX/Sxy family protein compare
ABID97_RS21150 -2.6 -9.1 FAD-dependent oxidoreductase compare
ABID97_RS01590 -2.6 -6.8 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
ABID97_RS22185 -2.5 -10.9 urate hydroxylase PuuD compare
ABID97_RS13990 -2.5 -4.8 amino acid aminotransferase compare
ABID97_RS15665 -2.5 -5.4 [protein-PII] uridylyltransferase compare
ABID97_RS17850 -2.5 -1.3 tetratricopeptide repeat protein compare
ABID97_RS22320 -2.5 -6.6 glyoxylate carboligase compare
ABID97_RS22115 -2.5 -8.7 LysR family transcriptional regulator compare
ABID97_RS23455 -2.5 -4.4 hypothetical protein compare
ABID97_RS10920 -2.5 -2.1 molybdenum cofactor biosynthesis protein MoaE compare
ABID97_RS15215 -2.5 -1.5 lysozyme compare
ABID97_RS08430 -2.4 -1.7 tryptophan synthase subunit beta compare
ABID97_RS23525 -2.4 -2.0 urease subunit beta compare
ABID97_RS02455 -2.4 -5.2 nucleotidyltransferase family protein compare
ABID97_RS13860 -2.3 -7.0 hypothetical protein compare
ABID97_RS07430 -2.3 -7.5 pantoate--beta-alanine ligase compare
ABID97_RS01650 -2.3 -1.6 orotidine-5'-phosphate decarboxylase compare
ABID97_RS15375 -2.3 -5.9 DUF934 domain-containing protein compare
ABID97_RS17540 -2.2 -2.1 NAD(P)-dependent oxidoreductase compare
ABID97_RS23915 -2.2 -3.9 heme o synthase compare
ABID97_RS02100 -2.2 -4.2 cyclic pyranopterin monophosphate synthase MoaC compare
ABID97_RS05765 -2.2 -3.3 UDP-glucose 4-epimerase GalE compare
ABID97_RS05670 -2.2 -2.1 glucose-1-phosphate thymidylyltransferase RfbA compare
ABID97_RS25085 -2.2 -3.6 2-hydroxychromene-2-carboxylate isomerase compare
ABID97_RS05755 -2.1 -2.9 glycosyltransferase compare
ABID97_RS16600 -2.1 -7.9 CysB family HTH-type transcriptional regulator compare
ABID97_RS05235 -2.1 -1.3 PA2169 family four-helix-bundle protein compare
ABID97_RS05260 -2.1 -1.5 aminodeoxychorismate/anthranilate synthase component II compare
ABID97_RS03800 -2.1 -2.8 O-antigen ligase family protein compare
ABID97_RS11750 -2.1 -2.1 trimeric intracellular cation channel family protein compare
ABID97_RS20610 -2.0 -9.3 DNA-binding protein YbiB compare
ABID97_RS27635 -2.0 -1.2 NAD(P)H-dependent oxidoreductase compare
ABID97_RS07525 -2.0 -7.5 molybdate ABC transporter permease subunit compare
ABID97_RS02460 -2.0 -11.2 aminopeptidase P N-terminal domain-containing protein compare
ABID97_RS08480 -1.9 -1.9 citrate synthase compare
ABID97_RS16915 -1.9 -6.3 ATP-dependent Clp protease adapter ClpS compare
ABID97_RS12310 -1.9 -1.6 thiamine pyrophosphate-requiring protein compare
ABID97_RS06450 -1.9 -2.5 glucans biosynthesis glucosyltransferase MdoH compare
ABID97_RS07535 -1.9 -9.5 ATP-binding cassette domain-containing protein compare
ABID97_RS14090 -1.9 -1.4 response regulator transcription factor compare
ABID97_RS02110 -1.9 -11.0 type IV pilus modification protein PilV compare
ABID97_RS15380 -1.9 -7.4 nitrite/sulfite reductase compare
ABID97_RS07530 -1.8 -5.0 molybdate ABC transporter substrate-binding protein compare
ABID97_RS23430 -1.8 -7.9 type IV-A pilus assembly ATPase PilB compare
ABID97_RS03640 -1.8 -5.6 SMP-30/gluconolactonase/LRE family protein compare
ABID97_RS02135 -1.8 -7.1 GspH/FimT family pseudopilin compare
ABID97_RS01840 -1.8 -9.8 DUF1631 family protein compare
ABID97_RS03540 -1.8 -3.3 ABC transporter ATP-binding protein compare
ABID97_RS06460 -1.8 -1.7 sigma 54-interacting transcriptional regulator compare
ABID97_RS02825 -1.7 -5.9 heavy metal translocating P-type ATPase compare
ABID97_RS01755 -1.7 -6.3 pyruvate kinase compare
ABID97_RS24705 -1.7 -5.0 response regulator compare
ABID97_RS02125 -1.7 -13.6 PilC/PilY family type IV pilus protein compare
ABID97_RS02120 -1.7 -9.7 PilX N-terminal domain-containing pilus assembly protein compare
ABID97_RS25525 -1.7 -4.0 LacI family DNA-binding transcriptional regulator compare
ABID97_RS08220 -1.7 -9.4 phosphoenolpyruvate carboxylase compare
ABID97_RS11640 -1.7 -5.3 TetR family transcriptional regulator compare
ABID97_RS23440 -1.6 -8.2 A24 family peptidase compare
ABID97_RS14925 -1.6 -7.4 arginyltransferase compare
ABID97_RS22860 -1.6 -2.1 MurR/RpiR family transcriptional regulator compare
ABID97_RS17200 -1.6 -10.6 ribonuclease R compare
ABID97_RS07415 -1.6 -8.2 quinolinate synthase NadA compare
ABID97_RS10705 -1.6 -2.1 H-NS histone family protein compare
ABID97_RS08710 -1.5 -4.3 polynucleotide adenylyltransferase PcnB compare
ABID97_RS04760 -1.5 -1.5 SPOR domain-containing protein compare
ABID97_RS20425 -1.5 -2.2 DUF2818 family protein compare
ABID97_RS05515 -1.5 -1.3 AEC family transporter compare
ABID97_RS02130 -1.5 -7.5 type IV pilin protein compare
ABID97_RS14745 -1.5 -5.7 gephyrin-like molybdotransferase Glp compare
ABID97_RS28635 -1.5 -3.9 IclR family transcriptional regulator compare
ABID97_RS19375 -1.5 -3.1 bifunctional 2-methylcitrate dehydratase/aconitate hydratase compare
ABID97_RS15995 -1.5 -4.3 PilZ domain-containing protein compare
ABID97_RS02115 -1.5 -7.5 PilW family protein compare
ABID97_RS04630 -1.5 -4.8 glutathione synthase compare
ABID97_RS03680 -1.5 -5.0 lysophospholipid transporter LplT compare
ABID97_RS20205 -1.5 -4.0 nicotinamide riboside transporter PnuC compare
ABID97_RS23230 -1.4 -7.2 transposase compare
ABID97_RS16535 -1.4 -4.3 arginine/lysine/ornithine decarboxylase compare
ABID97_RS16695 -1.4 -8.8 Tol-Pal system beta propeller repeat protein TolB compare
ABID97_RS18820 -1.4 -1.3 PrpF domain-containing protein compare
ABID97_RS11425 -1.4 -1.7 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS23450 -1.4 -4.6 MBOAT family protein compare
ABID97_RS22760 -1.4 -3.3 TetR/AcrR family transcriptional regulator compare
ABID97_RS06415 -1.4 -9.5 sigma-54 dependent transcriptional regulator compare
ABID97_RS07440 -1.4 -5.8 L-aspartate oxidase compare
ABID97_RS23650 -1.4 -10.1 serine/threonine-protein kinase compare
ABID97_RS06920 -1.4 -2.3 7-cyano-7-deazaguanine synthase QueC compare
ABID97_RS15360 -1.4 -3.9 GTP-binding protein compare
ABID97_RS14625 -1.4 -2.7 phosphate regulon sensor histidine kinase PhoR compare
ABID97_RS17055 -1.3 -3.4 YhbY family RNA-binding protein compare
ABID97_RS10695 -1.3 -4.0 YbhB/YbcL family Raf kinase inhibitor-like protein compare
ABID97_RS02140 -1.3 -5.3 sugar transferase compare
ABID97_RS14115 -1.3 -3.5 dihydrolipoyl dehydrogenase compare
ABID97_RS22330 -1.3 -1.2 2-hydroxy-3-oxopropionate reductase compare
ABID97_RS03915 -1.3 -4.0 DUF4124 domain-containing protein compare
ABID97_RS06175 -1.3 -9.7 STAS domain-containing protein compare
ABID97_RS07395 -1.3 -1.8 glutaredoxin 3 compare
ABID97_RS16910 -1.3 -6.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABID97_RS24750 -1.3 -4.4 redox-regulated ATPase YchF compare
ABID97_RS12575 -1.3 -1.3 ATP-grasp domain-containing protein compare
ABID97_RS15370 -1.3 -5.5 phosphoadenosine phosphosulfate reductase family protein compare
ABID97_RS15695 -1.3 -3.5 peptide-methionine (R)-S-oxide reductase MsrB compare
ABID97_RS24920 -1.3 -1.1 Holliday junction branch migration protein RuvA compare
ABID97_RS24690 -1.3 -7.4 methyl-accepting chemotaxis protein compare
ABID97_RS02145 -1.3 -4.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
ABID97_RS16920 -1.3 -6.5 NADP-dependent isocitrate dehydrogenase compare
ABID97_RS14975 -1.2 -3.4 hypothetical protein compare
ABID97_RS14160 -1.2 -3.2 cell division protein ZapE compare
ABID97_RS07410 -1.2 -3.6 carboxylating nicotinate-nucleotide diphosphorylase compare
ABID97_RS22060 -1.2 -1.0 MFS transporter compare
ABID97_RS01825 -1.2 -8.8 LysM peptidoglycan-binding domain-containing protein compare
ABID97_RS24040 -1.2 -1.7 MarR family transcriptional regulator compare
ABID97_RS23435 -1.2 -8.3 type II secretion system F family protein compare
ABID97_RS16690 -1.2 -3.2 peptidoglycan-associated lipoprotein Pal compare
ABID97_RS18255 -1.2 -1.3 hypothetical protein compare
ABID97_RS22530 -1.2 -2.7 aldo/keto reductase compare
ABID97_RS20210 -1.2 -2.7 ATP-binding protein compare
ABID97_RS09680 -1.2 -1.5 hypothetical protein compare
ABID97_RS03910 -1.2 -1.6 orotate phosphoribosyltransferase compare
ABID97_RS11510 -1.2 -1.7 ATP-binding cassette domain-containing protein compare
ABID97_RS09595 -1.2 -1.3 Arc family DNA-binding protein compare
ABID97_RS22705 -1.2 -7.9 ATPase, T2SS/T4P/T4SS family compare
ABID97_RS04735 -1.2 -2.0 LysR family transcriptional regulator compare
ABID97_RS16985 -1.2 -2.5 transcriptional repressor LexA compare
ABID97_RS13865 -1.2 -3.2 hypothetical protein compare
ABID97_RS05855 -1.1 -7.2 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABID97_RS23380 -1.1 -6.2 lytic transglycosylase domain-containing protein compare
ABID97_RS16450 -1.1 -5.5 anti-sigma factor compare
ABID97_RS22050 -1.1 -6.9 BMP family ABC transporter substrate-binding protein compare
ABID97_RS03110 -1.1 -3.8 helix-turn-helix transcriptional regulator compare
ABID97_RS10690 -1.1 -4.7 GlsB/YeaQ/YmgE family stress response membrane protein compare
ABID97_RS04855 -1.1 -1.5 CinA family protein compare
ABID97_RS08250 -1.1 -4.0 RluA family pseudouridine synthase compare
ABID97_RS27500 -1.1 -1.3 AMP-binding protein compare
ABID97_RS17265 -1.1 -1.5 two-component system response regulator OmpR compare
ABID97_RS00340 -1.1 -6.5 DUF2946 family protein compare
ABID97_RS23270 -1.1 -5.9 pilus assembly protein PilP compare
ABID97_RS27525 -1.1 -1.8 PadR family transcriptional regulator compare
ABID97_RS28990 -1.1 -3.3 aspartate 1-decarboxylase compare
ABID97_RS26160 -1.1 -0.9 nuclear transport factor 2 family protein compare
ABID97_RS28080 -1.1 -0.8 YbaN family protein compare
ABID97_RS03385 -1.1 -8.7 AAA family ATPase compare
ABID97_RS22740 -1.1 -1.9 DUF58 domain-containing protein compare
ABID97_RS09735 -1.1 -2.1 DUF3168 domain-containing protein compare
ABID97_RS27760 -1.1 -1.0 DUF3237 domain-containing protein compare
ABID97_RS27370 -1.1 -0.9 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
ABID97_RS06520 -1.1 -1.5 SAM-dependent methyltransferase compare
ABID97_RS27795 -1.1 -0.8 TetR/AcrR family transcriptional regulator compare
ABID97_RS11960 -1.1 -1.0 hypothetical protein compare
ABID97_RS18495 -1.1 -1.0 DUF2889 domain-containing protein compare
ABID97_RS06345 -1.0 -2.6 3-deoxy-7-phosphoheptulonate synthase compare
ABID97_RS25130 -1.0 -4.8 carboxyl transferase domain-containing protein compare
ABID97_RS14200 -1.0 -5.2 pseudouridine synthase compare
ABID97_RS26545 -1.0 -0.8 alpha/beta fold hydrolase compare
ABID97_RS25900 -1.0 -1.8 ABC transporter permease compare
ABID97_RS23935 -1.0 -1.3 twin transmembrane helix small protein compare


Specific Phenotypes

For 15 genes in this experiment

For carbon source Adenine hydrochloride hydrate in Variovorax sp. OAS795

For carbon source Adenine hydrochloride hydrate across organisms