Experiment set2IT041 for Agrobacterium fabrum C58

Compare to:

L-Galactose carbon source

200 most important genes:

  gene name fitness t score description  
Atu2791 -7.8 -5.4 3-isopropylmalate dehydrogenase compare
Atu1845 -7.5 -5.2 phosphoribosylformylglycinamidine synthase I compare
Atu2289 -7.4 -11.3 anthranilate synthase component I and II compare
Atu0099 -7.4 -8.8 prephenate dehydratase compare
Atu1620 -7.2 -8.5 triosephosphate isomerase compare
Atu1687 -7.1 -9.7 anthranilate phosphoribosyltransferase compare
Atu2709 -7.0 -15.1 3-isopropylmalate dehydratase, large subunit compare
Atu1205 -6.9 -11.5 threonine dehydratase compare
Atu2726 -6.9 -19.3 pyruvate carboxylase compare
Atu2264 -6.8 -10.5 2-isopropylmalate synthase compare
Atu0432 -6.6 -9.1 O-succinylhomoserine sulfhydrylase compare
Atu2718 -6.6 -6.4 homoserine O-succinyltransferase compare
Atu0679 -6.5 -6.4 ATP phosphoribosyltransferase compare
Atu1308 -6.5 -6.7 aspartate carbamoyl transferase catalytic subunit compare
Atu0400 -6.4 -6.3 orotate phosphoribosyltransferase compare
Atu0399 -6.4 -4.4 dihydroorotase compare
Atu2040 -6.4 -4.4 phosphoserine phosphatase compare
Atu3740 -6.3 -9.7 fructose bisphosphate aldolase compare
Atu1850 -6.3 -4.5 phosphoribosylformylglycinamidine synthetase II compare
Atu3885 -6.1 -8.4 inositol monophosphatase compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu3483 -6.1 -7.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3706 -6.1 -9.3 D-3-phosphoglycerate dehydrogenase compare
Atu1140 -6.1 -6.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0486 -6.1 -7.3 dihydroorotate dehydrogenase compare
Atu2650 -6.0 -12.8 glycerol-3-phosphate dehydrogenase compare
Atu0017 -6.0 -4.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1750 -6.0 -8.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu2036 -5.9 -15.7 acetolactate synthase III, large subunit compare
Atu2814 -5.9 -9.2 zinc-binding dehydrogenase compare
Atu0678 -5.9 -5.7 histidyl-tRNA synthetase compare
Atu1075 -5.8 -8.8 amidophosphoribosyltransferase compare
Atu0298 -5.7 -7.8 orotidine 5 compare
Atu1588 -5.6 -10.1 homoserine dehydrogenase compare
Atu1844 -5.6 -5.4 Phosphoribosylformylglycinamidine synthetase compare
Atu1307 -5.5 -7.0 dihydroorotase compare
Atu2747 -5.5 -11.2 hypothetical protein compare
Atu3754 -5.4 -6.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0038 -5.4 -6.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0537 -5.4 -7.4 histidinol dehydrogenase compare
Atu2816 -5.3 -13.0 oxidoreductase compare
Atu1688 -5.2 -7.1 indole-3-glycerol-phosphate synthase compare
Atu0647 -5.2 -7.1 phosphoribosylamine--glycine ligase compare
Atu2790 -5.2 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu1141 -5.1 -7.6 Phosphoribosylglycinamide synthetase compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu3755 -4.9 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2815 -4.8 -11.0 hypothetical protein compare
Atu2205 -4.8 -7.6 transcriptional regulator, MarR family compare
Atu3731 -4.7 -8.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu3482 -4.6 -11.8 pantoate--beta-alanine ligase compare
Atu2296 -4.6 -9.8 2-dehydro-3-deoxygluconokinase compare
Atu3783 -4.6 -19.7 glutamate synthase subunit beta compare
Atu2015 -4.6 -12.6 aminotransferase compare
Atu1589 -4.5 -9.4 aminotransferase, class I compare
Atu2115 -4.4 -13.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2819 -4.4 -17.3 ABC transporter, nucleotide binding/ATPase protein (ribose) compare
Atu1686 -4.3 -15.2 peptidyl-prolyl cis-trans isomerse D compare
Atu1456 -4.2 -14.2 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0503 -4.1 -17.9 enoyl-CoA hydratase compare
Atu0043 -4.1 -3.9 imidazoleglycerol-phosphate dehydratase compare
Atu0039 -4.0 -3.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu3784 -4.0 -23.7 glutamate synthase large subunit compare
Atu4505 -3.9 -11.1 LacI family transcriptional regulator compare
Atu1446 -3.9 -4.5 two component response regulator compare
Atu0502 -3.8 -9.7 acetyl-CoA acetyltransferase compare
Atu0030 -3.7 -2.6 phosphocarrier protein HPr compare
Atu1030 -3.7 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2818 -3.7 -8.7 ABC transporter, membrane spanning protein (ribose) compare
Atu0501 -3.6 -17.7 acyl-CoA dehydrogenase compare
Atu2548 -3.5 -15.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2020 -3.4 -5.9 transcriptional regulator, TetR family compare
Atu1685 -3.4 -1.9 hypothetical protein compare
Atu1455 -3.4 -5.7 hypothetical protein compare
Atu1464 -3.3 -9.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu0641 -3.3 -5.4 hypothetical protein compare
Atu1454 -3.2 -9.1 siroheme synthase compare
Atu1462 -3.2 -14.1 glycine cleavage system protein P2 compare
Atu2813 -3.1 -15.2 altronate oxidoreductase compare
Atu2817 -3.0 -7.6 ABC transporter, substrate binding protein (ribose) compare
Atu0876 -3.0 -2.4 superoxide dismutase compare
Atu0040 -3.0 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0029 -2.9 -8.7 S-adenosylhomocysteine hydrolase compare
Atu1463 -2.9 -8.0 glycine cleavage system component H compare
Atu2155 -2.8 -17.5 methionine synthase compare
Atu3469 -2.8 -4.1 phosphoglyceromutase compare
Atu4616 -2.8 -2.4 dTDP-4-dehydrorhamnose reductase compare
Atu4098 -2.7 -15.0 quinolinate synthetase compare
Atu3739 -2.7 -2.7 phosphoglycerate kinase compare
Atu4096 -2.5 -10.3 nicotinate-nucleotide pyrophosphorylase compare
Atu0792 -2.5 -7.4 hypothetical protein compare
Atu6098 -2.4 -1.0 transcriptional regulator, HTH family compare
Atu0723 -2.4 -2.7 FAD dependent oxidoreductase compare
Atu0405 -2.4 -16.4 long-chain-fatty-acid-CoA-ligase compare
Atu1359 -2.3 -1.8 dnaK deletion suppressor protein compare
Atu4097 -2.1 -12.0 L-aspartate oxidase compare
Atu2127 -2.1 -7.9 L-carnitine dehydratase compare
Atu3998 -2.1 -10.7 8-amino-7-oxononanoate synthase compare
Atu2684 -2.1 -3.1 hypothetical protein compare
Atu1748 -2.1 -11.6 NIFU-like protein compare
Atu0422 -2.1 -1.7 ABC transporter, membrane spanning protein compare
Atu4000 -2.1 -14.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3486 -2.1 -2.8 DeoR family transcriptional regulator compare
Atu3999 -2.1 -4.0 dithiobiotin synthetase compare
Atu3289 -2.1 -4.0 thiamine-phosphate pyrophosphorylase compare
Atu3290 -2.0 -8.0 phosphomethylpyrimidine kinase compare
Atu3997 -2.0 -11.2 biotin synthetase compare
Atu2822 -2.0 -10.6 D-galactarate dehydratase compare
Atu2569 -2.0 -9.9 thiamine biosynthesis protein compare
Atu8115 -2.0 -5.3 Hypothetical Protein compare
Atu3288 -1.9 -9.4 hydroxyethylthiazole kinase compare
Atu0769 -1.9 -2.5 protoheme IX farnesyltransferase compare
Atu0346 -1.9 -4.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu6114 -1.8 -2.3 hypothetical protein compare
Atu2801 -1.7 -5.0 precorrin-2 C20 methyltransferase compare
Atu1572 -1.7 -7.2 hydrolase compare
Atu4001 -1.7 -7.3 3-oxoacyl-ACP synthase compare
Atu3732 -1.6 -5.3 hemolysin compare
Atu1339 -1.6 -2.6 ribonuclease E compare
Atu2746 -1.5 -4.1 hypothetical protein compare
Atu2821 -1.5 -4.6 transcriptional regulator, GntR family compare
Atu0434 -1.5 -2.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3598 -1.4 -2.6 thiol:disulfide interchange protein compare
Atu1354 -1.4 -1.0 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2808 -1.3 -5.9 cobyric acid synthase compare
Atu2379 -1.3 -8.1 phosphomannomutase compare
Atu3496 -1.3 -1.6 hypothetical protein compare
Atu1028 -1.3 -2.8 hypothetical protein compare
Atu4477 -1.3 -7.3 TetR family transcriptional regulator compare
Atu2554 -1.3 -2.5 lysyl-tRNA synthetase compare
Atu2209 -1.3 -2.5 pyrroline-5-carboxylate reductase compare
Atu3663 -1.3 -1.7 hypothetical protein compare
Atu1604 -1.3 -8.7 poly-beta-hydroxybutyrate synthase compare
Atu1457 -1.3 -1.5 hypothetical protein compare
Atu4166 -1.3 -2.2 UDP-glucose 4-epimerase compare
Atu0189 -1.2 -1.9 ABC transporter, membrane spanning protein (peptide) compare
Atu8099 -1.2 -1.5 hypothetical protein compare
Atu0894 -1.2 -2.2 ABC transporter, membrane spanning protein compare
Atu0421 -1.2 -1.7 ABC transporter, membrane spanning protein compare
Atu1542 -1.2 -4.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2803 -1.2 -4.0 Cobalamin biosynthesis associated protein compare
Atu0836 -1.2 -2.0 Glutathione-S-transferase compare
Atu2799 -1.2 -4.7 precorrin-6x reductase compare
Atu4614 -1.2 -7.0 glycosyltransferase compare
Atu4317 -1.2 -2.7 TetR family transcriptional regulator compare
Atu4617 -1.2 -6.1 dTDP-D-glucose-4,6-dehydratase compare
Atu0031 -1.2 -1.5 PTS system, IIA component compare
Atu4217 -1.1 -1.5 TetR family transcriptional regulator compare
Atu2795 -1.1 -4.3 cobalamin biosynthetic protein compare
Atu2804 -1.1 -6.8 cobaltochelatase subunit compare
Atu2797 -1.1 -2.0 cobalamin biosynthesis protein compare
Atu4618 -1.1 -6.5 dTDP-rhamnose-3,5-epimerase compare
Atu8052 -1.1 -1.0 hypothetical protein compare
Atu1774 -1.1 -4.1 ABC transporter, substrate binding protein (peptide) compare
Atu2809 -1.1 -5.5 cobalamin biosynthesis protein compare
Atu0601 -1.1 -6.7 oxidoreductase compare
Atu2770 -1.1 -4.8 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3009 -1.1 -0.7 exopolysaccharide production protein compare
Atu1891 -1.1 -3.4 cobalamin biosynthesis protein compare
Atu0106 -1.1 -3.0 cold shock protein compare
Atu1258 -1.1 -4.7 ATP-dependent Clp protease, proteolytic subunit compare
Atu4613 -1.1 -7.0 glycosyltransferase compare
Atu4072 -1.0 -1.3 nodulation protein N compare
Atu1163 -1.0 -2.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3287 -1.0 -3.4 thiamine biosynthesis associated protein compare
Atu2802 -1.0 -6.5 precorrin-8X methylmutase compare
Atu2555 -1.0 -2.3 L-lysine 2,3-aminomutase compare
Atu5540 -1.0 -0.7 hypothetical protein compare
Atu0966 -1.0 -3.0 hypothetical protein compare
Atu2125 -1.0 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2494 -0.9 -5.1 NAD(P)+ transhydrogenase beta chain compare
Atu0687 -0.9 -2.3 hypothetical protein compare
Atu0291 -0.9 -4.7 hypothetical protein compare
Atu4161 -0.9 -1.3 hypothetical protein compare
Atu2633 -0.9 -1.3 RhtB family transporter compare
Atu4615 -0.9 -4.1 glucose-1-phosphate thymidylyltransferase compare
Atu3485 -0.9 -4.8 short chain dehydrogenase compare
Atu4346 -0.9 -3.9 hypothetical protein compare
Atu5501 -0.9 -1.5 hypothetical protein compare
Atu5010 -0.9 -1.8 hypothetical protein compare
Atu2493 -0.9 -6.3 NAD(P)+ transhydrogenase compare
Atu0977 -0.9 -3.2 serine protease DO-like protease compare
Atu2376 -0.9 -0.7 hypothetical protein compare
Atu4507 -0.9 -5.1 dehydrogenase compare
Atu2796 -0.9 -2.7 precorrin-4 C11-methyltransferase compare
Atu2124 -0.9 -2.3 transcriptional regulator, ArsR family compare
Atu0590 -0.8 -4.1 transcriptional regulator repressor compare
Atu2793 -0.8 -3.3 cobyrinic acid a,c-diamide synthase compare
Atu0190 -0.8 -3.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0533 -0.8 -1.0 putative inhibitor of septum formation compare
Atu1285 -0.8 -3.9 metal dependent hydrolase compare
Atu5173 -0.8 -1.5 dehydrogenase compare
Atu4502 -0.8 -3.8 cobalamin synthesis protein compare
Atu0188 -0.8 -2.5 ABC transporter, membrane spanning protein (peptide) compare
Atu0981 -0.8 -5.0 glutamate-ammonia-ligase adenylyltransferase compare
Atu3908 -0.8 -5.3 GntR family transcriptional regulator compare
Atu0925 -0.8 -1.7 hypothetical protein compare
Atu1372 -0.8 -4.4 hypothetical protein compare
Atu3763 -0.8 -1.1 hypothetical protein compare
Atu5513 -0.8 -1.2 cold shock protein compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source L-Galactose in Agrobacterium fabrum C58

For carbon source L-Galactose across organisms