Experiment set2IT039 for Agrobacterium fabrum C58

Compare to:

D-Fructose carbon source

200 most important genes:

  gene name fitness t score description  
Atu0401 -9.1 -6.3 fructokinase compare
Atu1750 -9.0 -6.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu2791 -7.9 -5.5 3-isopropylmalate dehydrogenase compare
Atu3754 -7.8 -6.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2650 -7.8 -10.7 glycerol-3-phosphate dehydrogenase compare
Atu0486 -7.6 -5.3 dihydroorotate dehydrogenase compare
Atu0063 -7.6 -5.3 ABC transporter, substrate binding protein (sugar) conserved
Atu2289 -7.3 -14.1 anthranilate synthase component I and II compare
Atu1687 -7.3 -11.1 anthranilate phosphoribosyltransferase compare
Atu1205 -7.2 -9.8 threonine dehydratase compare
Atu2726 -7.1 -19.0 pyruvate carboxylase compare
Atu2709 -7.1 -17.2 3-isopropylmalate dehydratase, large subunit compare
Atu0679 -7.0 -4.8 ATP phosphoribosyltransferase compare
Atu1141 -6.9 -6.7 Phosphoribosylglycinamide synthetase compare
Atu1075 -6.9 -6.7 amidophosphoribosyltransferase compare
Atu0432 -6.8 -9.3 O-succinylhomoserine sulfhydrylase compare
Atu2264 -6.8 -13.0 2-isopropylmalate synthase compare
Atu0099 -6.7 -12.1 prephenate dehydratase compare
Atu1308 -6.7 -7.0 aspartate carbamoyl transferase catalytic subunit compare
Atu2036 -6.6 -12.8 acetolactate synthase III, large subunit compare
Atu1850 -6.5 -6.2 phosphoribosylformylglycinamidine synthetase II compare
Atu1588 -6.5 -10.0 homoserine dehydrogenase compare
Atu2040 -6.5 -4.5 phosphoserine phosphatase compare
Atu2718 -6.5 -7.8 homoserine O-succinyltransferase compare
Atu3706 -6.4 -9.8 D-3-phosphoglycerate dehydrogenase compare
Atu1845 -6.3 -4.2 phosphoribosylformylglycinamidine synthase I compare
Atu3707 -6.2 -4.3 phosphoserine aminotransferase compare
Atu0399 -6.2 -6.0 dihydroorotase compare
Atu3885 -6.1 -9.3 inositol monophosphatase compare
Atu0017 -6.0 -4.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0030 -6.0 -2.5 phosphocarrier protein HPr compare
Atu1688 -6.0 -5.8 indole-3-glycerol-phosphate synthase compare
Atu1307 -6.0 -9.1 dihydroorotase compare
Atu0537 -5.9 -7.1 histidinol dehydrogenase compare
Atu3755 -5.9 -5.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0678 -5.8 -6.9 histidyl-tRNA synthetase compare
Atu0647 -5.7 -5.6 phosphoribosylamine--glycine ligase compare
Atu0298 -5.7 -9.4 orotidine 5 compare
Atu0065 -5.6 -14.8 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu3783 -5.6 -14.6 glutamate synthase subunit beta compare
Atu0064 -5.6 -15.3 ABC transporter, membrane spanning protein (sugar) conserved
Atu0400 -5.5 -7.6 orotate phosphoribosyltransferase compare
Atu3739 -5.5 -2.9 phosphoglycerate kinase compare
Atu3483 -5.5 -7.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2790 -5.3 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu0043 -5.2 -3.6 imidazoleglycerol-phosphate dehydratase compare
Atu0041 -5.1 -3.5 glutamine amidotransferase compare
Atu1359 -5.1 -2.1 dnaK deletion suppressor protein compare
Atu3784 -4.9 -26.0 glutamate synthase large subunit compare
Atu2747 -4.9 -12.1 hypothetical protein compare
Atu1140 -4.9 -5.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0641 -4.9 -5.2 hypothetical protein compare
Atu2015 -4.8 -12.3 aminotransferase compare
Atu1844 -4.7 -5.2 Phosphoribosylformylglycinamidine synthetase compare
Atu0792 -4.6 -7.4 hypothetical protein compare
Atu3482 -4.6 -11.2 pantoate--beta-alanine ligase compare
Atu1686 -4.5 -17.9 peptidyl-prolyl cis-trans isomerse D compare
Atu3469 -4.4 -4.2 phosphoglyceromutase compare
Atu0038 -4.3 -6.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3731 -4.3 -8.8 5-formyltetrahydrofolate cyclo-ligase compare
Atu2548 -4.2 -17.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0598 -4.1 -13.3 phosphogluconate dehydratase compare
Atu1456 -3.8 -12.0 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1454 -3.7 -9.6 siroheme synthase compare
Atu0039 -3.7 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu1685 -3.6 -2.1 hypothetical protein compare
Atu1589 -3.4 -8.2 aminotransferase, class I compare
Atu1030 -3.3 -2.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1620 -3.3 -12.3 triosephosphate isomerase compare
Atu4096 -3.1 -11.5 nicotinate-nucleotide pyrophosphorylase compare
Atu0040 -3.0 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2155 -3.0 -20.5 methionine synthase compare
Atu3289 -2.9 -4.3 thiamine-phosphate pyrophosphorylase compare
Atu4098 -2.9 -11.9 quinolinate synthetase compare
Atu0723 -2.8 -2.7 FAD dependent oxidoreductase compare
Atu3288 -2.8 -8.2 hydroxyethylthiazole kinase compare
Atu3997 -2.7 -16.5 biotin synthetase compare
Atu1463 -2.7 -8.8 glycine cleavage system component H compare
Atu1455 -2.7 -4.7 hypothetical protein compare
Atu3999 -2.6 -3.2 dithiobiotin synthetase compare
Atu0029 -2.6 -8.8 S-adenosylhomocysteine hydrolase compare
Atu2569 -2.6 -16.2 thiamine biosynthesis protein compare
Atu1462 -2.5 -13.4 glycine cleavage system protein P2 compare
Atu4097 -2.5 -11.5 L-aspartate oxidase compare
Atu2205 -2.4 -7.7 transcriptional regulator, MarR family compare
Atu1464 -2.4 -9.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu0422 -2.4 -1.6 ABC transporter, membrane spanning protein compare
Atu1748 -2.3 -13.4 NIFU-like protein compare
Atu1446 -2.3 -3.4 two component response regulator compare
Atu0876 -2.2 -1.9 superoxide dismutase compare
Atu0434 -2.2 -4.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu6098 -2.2 -1.2 transcriptional regulator, HTH family compare
Atu3290 -2.2 -9.5 phosphomethylpyrimidine kinase compare
Atu1604 -2.2 -13.7 poly-beta-hydroxybutyrate synthase compare
Atu6114 -2.1 -3.7 hypothetical protein compare
Atu4000 -1.9 -12.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3998 -1.9 -10.8 8-amino-7-oxononanoate synthase compare
Atu1457 -1.9 -1.8 hypothetical protein compare
Atu2127 -1.8 -8.6 L-carnitine dehydratase compare
Atu0031 -1.7 -2.1 PTS system, IIA component compare
Atu4001 -1.6 -7.8 3-oxoacyl-ACP synthase compare
Atu8115 -1.6 -3.8 Hypothetical Protein compare
Atu1810 -1.5 -1.8 hypothetical protein compare
Atu4217 -1.4 -2.6 TetR family transcriptional regulator compare
Atu1542 -1.3 -5.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3730 -1.3 -1.3 hypothetical protein compare
Atu0501 -1.3 -8.2 acyl-CoA dehydrogenase compare
Atu1572 -1.3 -9.0 hydrolase compare
Atu3468 -1.3 -1.3 hypothetical protein compare
Atu1891 -1.3 -4.2 cobalamin biosynthesis protein compare
Atu0503 -1.2 -8.8 enoyl-CoA hydratase compare
Atu0361 -1.2 -2.6 transcriptional regulator compare
Atu2808 -1.2 -5.6 cobyric acid synthase compare
Atu2795 -1.2 -6.0 cobalamin biosynthetic protein compare
Atu2554 -1.2 -2.2 lysyl-tRNA synthetase compare
Atu0502 -1.1 -3.7 acetyl-CoA acetyltransferase compare
Atu3908 -1.1 -8.2 GntR family transcriptional regulator compare
Atu5173 -1.1 -2.1 dehydrogenase compare
Atu4711 -1.1 -4.6 two component sensor kinase compare
Atu4173 -1.1 -2.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu2800 -1.0 -3.4 precorrin-3B C17-methyltransferase compare
Atu0346 -1.0 -1.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4072 -1.0 -1.7 nodulation protein N compare
Atu2796 -1.0 -4.3 precorrin-4 C11-methyltransferase compare
Atu2809 -1.0 -6.1 cobalamin biosynthesis protein compare
Atu0769 -1.0 -1.2 protoheme IX farnesyltransferase compare
Atu6189 -1.0 -1.5 protein secretion chaperone compare
Atu2807 -1.0 -4.9 cob(I)alamin adenosyltransferase compare
Atu4108 -0.9 -6.2 ribonuclease D compare
Atu2804 -0.9 -6.3 cobaltochelatase subunit compare
Atu2770 -0.9 -5.4 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2020 -0.9 -1.7 transcriptional regulator, TetR family compare
Atu2684 -0.9 -2.0 hypothetical protein compare
Atu3518 -0.9 -5.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu0837 -0.9 -3.4 transcriptional regulator, MarR family compare
Atu2799 -0.9 -2.9 precorrin-6x reductase compare
Atu1372 -0.9 -3.5 hypothetical protein compare
Atu2125 -0.9 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu1774 -0.8 -3.6 ABC transporter, substrate binding protein (peptide) compare
Atu2286 -0.8 -1.6 hypothetical protein compare
Atu0115 -0.8 -1.1 hypothetical protein compare
Atu2798 -0.8 -3.6 precorrin-6y methyltransferase compare
Atu2802 -0.8 -3.4 precorrin-8X methylmutase compare
Atu2803 -0.8 -2.4 Cobalamin biosynthesis associated protein compare
Atu2123 -0.8 -2.2 methylenetetrahydrofolate reductase compare
Atu0322 -0.8 -3.5 enoyl CoA hydratase compare
Atu4317 -0.8 -3.3 TetR family transcriptional regulator compare
Atu1705 -0.8 -3.4 SEC-independent protein translocase protein compare
Atu1677 -0.8 -2.5 queuine tRNA-ribosyltransferase compare
Atu2793 -0.7 -2.9 cobyrinic acid a,c-diamide synthase compare
Atu2209 -0.7 -2.4 pyrroline-5-carboxylate reductase compare
Atu4075 -0.7 -3.5 glycogen synthase compare
Atu0986 -0.7 -1.1 hypothetical protein compare
Atu0319 -0.7 -1.2 ubiquinone biosynthesis protein compare
Atu5142 -0.7 -0.9 hypothetical protein compare
Atu3486 -0.7 -1.4 DeoR family transcriptional regulator compare
Atu0590 -0.7 -4.4 transcriptional regulator repressor compare
Atu5160 -0.7 -1.7 transcriptional regulator protein compare
Atu2797 -0.7 -1.8 cobalamin biosynthesis protein compare
Atu0883 -0.7 -1.8 hypothetical protein compare
Atu5451 -0.7 -0.9 hypothetical protein compare
Atu2805 -0.7 -3.8 cobalamin synthesis protein compare
Atu2640 -0.7 -3.0 hypothetical protein compare
Atu2201 -0.7 -1.6 hydrolase compare
Atu1812 -0.7 -2.3 hypothetical protein compare
Atu1634 -0.7 -0.9 hypothetical protein compare
Atu1818 -0.7 -1.8 hypothetical protein compare
Atu2832 -0.7 -1.7 tRNA modification GTPase compare
Atu0770 -0.7 -3.9 cytochrome C oxidase assembly protein compare
Atu0405 -0.6 -5.1 long-chain-fatty-acid-CoA-ligase compare
Atu1737 -0.6 -2.2 hypothetical protein compare
Atu3763 -0.6 -1.1 hypothetical protein compare
Atu2057 -0.6 -2.2 DNA helicase II compare
Atu0190 -0.6 -3.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu8166 -0.6 -2.3 hypothetical protein compare
Atu0846 -0.6 -2.3 transcriptional regulator, MarR family compare
Atu8165 -0.6 -3.2 hypothetical protein compare
Atu5075 -0.6 -2.9 GntR family transcriptional regulator compare
Atu2801 -0.6 -1.5 precorrin-2 C20 methyltransferase compare
Atu1518 -0.6 -2.7 transcriptional regulator, Fur family compare
Atu3423 -0.6 -1.3 hypothetical protein compare
Atu4527 -0.6 -1.3 hypothetical protein compare
Atu3287 -0.6 -2.0 thiamine biosynthesis associated protein compare
Atu2063 -0.6 -1.4 hypothetical protein compare
Atu0601 -0.6 -4.2 oxidoreductase compare
Atu2124 -0.6 -2.5 transcriptional regulator, ArsR family compare
Atu2376 -0.6 -0.4 hypothetical protein compare
Atu1678 -0.6 -2.6 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu5164 -0.6 -0.5 type IV secretion protein AvhB3 compare
Atu1744 -0.6 -1.9 nitroreductase family protein compare
Atu4053 -0.6 -1.2 succinoglycan biosynthesis protein compare
Atu2511 -0.6 -3.5 D-alanine aminotransferase compare
Atu4763 -0.5 -1.3 AsnC family transcriptional regulator compare
Atu4468 -0.5 -2.9 iron transport ABC transporter permease compare
Atu0189 -0.5 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu1904 -0.5 -1.9 transcriptional regulator compare
Atu0771 -0.5 -3.5 cytochrome c oxidase subunit III compare
Atu3732 -0.5 -3.1 hemolysin compare
Atu0188 -0.5 -1.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0331 -0.5 -0.9 sigma-54 modulation protein compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source D-Fructose in Agrobacterium fabrum C58

For carbon source D-Fructose across organisms