Experiment set2IT037 for Ralstonia solanacearum UW163

Compare to:

M63_quarter_strength

200 most important genes:

  gene name fitness t score description  
UW163_RS09435 -4.9 -4.6 heme biosynthesis protein HemY compare
UW163_RS15160 -3.8 -7.4 chorismate synthase compare
UW163_RS06705 -3.8 -6.0 glutamate synthase subunit beta compare
UW163_RS11110 -3.4 -4.4 3-isopropylmalate dehydratase small subunit compare
UW163_RS09420 -3.2 -15.4 phosphoenolpyruvate carboxylase compare
UW163_RS06700 -3.1 -14.7 glutamate synthase subunit alpha compare
UW163_RS18900 -3.0 -9.0 EamA/RhaT family transporter compare
UW163_RS06695 -3.0 -6.4 transposase compare
UW163_RS17010 -2.9 -15.5 hypothetical protein compare
UW163_RS10095 -2.9 -4.1 ribonuclease G compare
UW163_RS17125 -2.8 -13.6 phosphogluconate dehydratase compare
UW163_RS11105 -2.8 -5.9 3-isopropylmalate dehydratase large subunit compare
UW163_RS04045 -2.8 -16.1 homoserine O-acetyltransferase compare
UW163_RS02435 -2.8 -6.0 RNase adapter RapZ compare
UW163_RS18905 -2.8 -6.9 AraC family transcriptional regulator compare
UW163_RS11115 -2.8 -5.0 3-isopropylmalate dehydrogenase compare
UW163_RS02715 -2.6 -2.9 PTS fructose transporter subunit IIA compare
UW163_RS16750 -2.4 -10.5 xylose ABC transporter ATP-binding protein compare
UW163_RS17130 -2.4 -13.0 glucose-6-phosphate dehydrogenase compare
UW163_RS02230 -2.3 -4.3 gluconate kinase compare
UW163_RS16035 -2.3 -6.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
UW163_RS02190 -2.3 -5.0 threonine ammonia-lyase, biosynthetic compare
UW163_RS16755 -2.2 -5.5 D-xylose ABC transporter substrate-binding protein compare
UW163_RS03935 -2.2 -2.6 RNA polymerase-binding protein DksA compare
UW163_RS16050 -2.2 -8.4 chorismate mutase compare
UW163_RS03705 -2.2 -3.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
UW163_RS16745 -2.1 -5.7 sugar ABC transporter permease compare
UW163_RS09070 -2.1 -5.2 sulfite reductase compare
UW163_RS16760 -2.0 -14.0 porin compare
UW163_RS09265 -2.0 -2.0 methionine--tRNA ligase compare
UW163_RS09790 -1.9 -1.7 hypothetical protein compare
UW163_RS08910 -1.9 -2.3 phosphoribosylglycinamide formyltransferase compare
UW163_RS15880 -1.8 -9.2 cobalamin biosynthesis protein CobD compare
UW163_RS17140 -1.8 -9.2 glucokinase compare
UW163_RS09480 -1.8 -6.8 NAD+ synthase compare
UW163_RS14630 -1.7 -2.1 peptidylprolyl isomerase compare
UW163_RS23770 -1.7 -2.0 hypothetical protein compare
UW163_RS04980 -1.7 -1.7 sugar-binding lectin protein compare
UW163_RS19365 -1.6 -3.1 TetR/AcrR family transcriptional regulator compare
UW163_RS04050 -1.6 -7.0 methionine biosynthesis protein MetW compare
UW163_RS02890 -1.6 -4.7 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
UW163_RS03905 -1.5 -2.2 tyrosine recombinase XerC compare
UW163_RS25145 -1.5 -1.7 hypothetical protein compare
UW163_RS02625 -1.5 -2.6 cytochrome c oxidase assembly protein compare
UW163_RS14985 -1.5 -6.4 PAS domain-containing sensor histidine kinase compare
UW163_RS00655 -1.5 -2.3 protein TolQ compare
UW163_RS09060 -1.4 -5.4 CysB family HTH-type transcriptional regulator compare
UW163_RS22740 -1.4 -1.5 MarR family transcriptional regulator compare
UW163_RS03920 -1.4 -9.4 6-phosphogluconolactonase compare
UW163_RS08390 -1.3 -4.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
UW163_RS13545 -1.3 -2.3 disulfide bond formation protein B compare
UW163_RS03035 -1.3 -3.9 antibiotic biosynthesis monooxygenase compare
UW163_RS11920 -1.3 -1.9 sugar dehydratase compare
UW163_RS03785 -1.3 -1.6 DUF4390 domain-containing protein compare
UW163_RS12775 -1.2 -2.7 FtsH protease activity modulator HflK compare
UW163_RS07435 -1.2 -2.2 prepilin peptidase compare
UW163_RS07135 -1.2 -2.7 type 1 glutamine amidotransferase compare
UW163_RS06905 -1.2 -4.4 ClpXP protease specificity-enhancing factor compare
UW163_RS16165 -1.2 -4.8 hypothetical protein compare
UW163_RS13460 -1.2 -2.4 ribonuclease compare
UW163_RS09330 -1.2 -1.5 superoxide dismutase family protein compare
UW163_RS01865 -1.1 -6.4 nucleotidyltransferase family protein compare
UW163_RS09170 -1.1 -1.0 hypothetical protein compare
UW163_RS23570 -1.1 -2.3 transcriptional regulator compare
UW163_RS12035 -1.1 -2.1 GlsB/YeaQ/YmgE family stress response membrane protein compare
UW163_RS05905 -1.1 -5.3 general secretion pathway protein GspK compare
UW163_RS03780 -1.1 -3.3 sensor histidine kinase compare
UW163_RS04125 -1.1 -2.2 TetR family transcriptional regulator compare
UW163_RS02195 -1.1 -2.3 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
UW163_RS20050 -1.1 -4.2 low molecular weight phosphotyrosine protein phosphatase compare
UW163_RS00625 -1.1 -2.0 7-cyano-7-deazaguanine synthase QueC compare
UW163_RS06590 -1.1 -2.3 cytochrome c biogenesis protein ResB compare
UW163_RS02980 -1.1 -6.0 DNA-binding response regulator compare
UW163_RS20955 -1.0 -3.1 D-aminoacylase compare
UW163_RS06725 -1.0 -1.0 outer membrane lipid asymmetry maintenance protein MlaD compare
UW163_RS14800 -1.0 -5.4 polyhydroxyalkanoate synthesis repressor PhaR compare
UW163_RS08950 -1.0 -2.6 50S ribosomal protein L33 compare
UW163_RS14100 -1.0 -1.6 muconate cycloisomerase compare
UW163_RS05880 -1.0 -4.5 type II secretion system protein GspE compare
UW163_RS20030 -1.0 -1.7 multidrug MFS transporter compare
UW163_RS11765 -1.0 -1.1 Fe-S assembly protein IscX compare
UW163_RS21625 -1.0 -1.3 hypothetical protein compare
UW163_RS09920 -1.0 -1.1 DNA polymerase I compare
UW163_RS00630 -0.9 -2.4 tol-pal system protein YbgF compare
UW163_RS19510 -0.9 -3.6 leucine-rich repeat domain-containing protein compare
UW163_RS10885 -0.9 -2.8 urease subunit gamma compare
UW163_RS13890 -0.9 -2.0 hypothetical protein compare
UW163_RS07140 -0.9 -3.0 anthranilate synthase component I compare
UW163_RS08485 -0.9 -2.2 site-specific tyrosine recombinase XerD compare
UW163_RS08190 -0.9 -2.3 rhombosortase compare
UW163_RS15995 -0.9 -2.0 ADP-glyceromanno-heptose 6-epimerase compare
UW163_RS08325 -0.8 -3.4 poly(A) polymerase compare
UW163_RS12345 -0.8 -2.2 site-2 protease family protein compare
UW163_RS25150 -0.8 -1.5 hypothetical protein compare
UW163_RS00895 -0.8 -2.1 glycosyltransferase family 2 protein compare
UW163_RS11710 -0.8 -2.7 ABC transporter permease compare
UW163_RS10665 -0.8 -4.5 DUF3619 domain-containing protein compare
UW163_RS14815 -0.8 -3.6 class I poly(R)-hydroxyalkanoic acid synthase compare
UW163_RS17530 -0.8 -2.0 flagellar motor switch protein FliN compare
UW163_RS03075 -0.8 -2.2 butyryl-CoA dehydrogenase compare
UW163_RS09935 -0.8 -1.8 ZIP family metal transporter compare
UW163_RS14505 -0.8 -1.7 BolA family transcriptional regulator compare
UW163_RS06635 -0.8 -1.4 iron donor protein CyaY compare
UW163_RS02985 -0.8 -1.3 response regulator compare
UW163_RS02075 -0.8 -1.8 TetR/AcrR family transcriptional regulator compare
UW163_RS04730 -0.8 -2.2 LysR family transcriptional regulator compare
UW163_RS07680 -0.8 -2.5 shikimate dehydrogenase compare
UW163_RS10110 -0.8 -1.5 ribosome silencing factor compare
UW163_RS14160 -0.8 -0.8 dethiobiotin synthase compare
UW163_RS09010 -0.8 -1.6 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
UW163_RS10255 -0.8 -2.8 DUF979 domain-containing protein compare
UW163_RS02430 -0.8 -2.1 hypothetical protein compare
UW163_RS09140 -0.8 -2.6 LysR family transcriptional regulator compare
UW163_RS08255 -0.8 -1.1 RNA-binding S4 domain-containing protein compare
UW163_RS05885 -0.8 -5.7 type II secretion system protein GspD compare
UW163_RS02995 -0.8 -5.1 sensor histidine kinase compare
UW163_RS20025 -0.8 -4.0 EpsG family protein compare
UW163_RS22125 -0.8 -1.3 translation initiation factor IF-1 compare
UW163_RS19825 -0.8 -1.2 hypothetical protein compare
UW163_RS02460 -0.8 -3.4 hypothetical protein compare
UW163_RS20870 -0.8 -1.8 hypothetical protein compare
UW163_RS20005 -0.8 -4.5 threonine dehydrogenase-zn-dependent dehydrogenase compare
UW163_RS11815 -0.7 -1.3 hypothetical protein compare
UW163_RS13805 -0.7 -3.5 phosphoenolpyruvate synthase compare
UW163_RS20010 -0.7 -4.6 dehydrogenase compare
UW163_RS04595 -0.7 -0.7 DNA-binding response regulator compare
UW163_RS21240 -0.7 -2.3 DoxX family protein compare
UW163_RS23210 -0.7 -4.2 hypothetical protein compare
UW163_RS10820 -0.7 -2.7 DUF2818 domain-containing protein compare
UW163_RS12875 -0.7 -2.2 putative addiction module antidote protein compare
UW163_RS16040 -0.7 -3.4 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
UW163_RS09400 -0.7 -2.0 DNA-directed RNA polymerase sigma-70 factor compare
UW163_RS02330 -0.7 -1.5 AraC family transcriptional regulator compare
UW163_RS07525 -0.7 -3.0 ABC transporter permease compare
UW163_RS20440 -0.7 -1.1 oxidoreductase compare
UW163_RS20965 -0.7 -0.8 permease compare
UW163_RS02590 -0.7 -1.5 protoheme IX farnesyltransferase compare
UW163_RS07950 -0.7 -2.4 DNA helicase RecG compare
UW163_RS00955 -0.7 -2.5 DUF179 domain-containing protein compare
UW163_RS04990 -0.7 -1.8 hypothetical protein compare
UW163_RS15310 -0.7 -2.6 TetR/AcrR family transcriptional regulator compare
UW163_RS21725 -0.7 -2.2 protein phosphatase CheZ compare
UW163_RS11420 -0.7 -4.2 formyltetrahydrofolate deformylase compare
UW163_RS20020 -0.7 -2.6 transferase compare
UW163_RS01605 -0.7 -5.2 succinate--CoA ligase subunit alpha compare
UW163_RS06730 -0.7 -1.2 ABC transporter compare
UW163_RS19985 -0.7 -4.8 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
UW163_RS15555 -0.7 -1.4 DUF2892 domain-containing protein compare
UW163_RS02410 -0.7 -2.4 RNA polymerase sigma-54 factor compare
UW163_RS05870 -0.7 -3.5 type II secretion system protein GspF compare
UW163_RS12925 -0.7 -1.7 myo-inosose-2 dehydratase compare
UW163_RS09590 -0.7 -0.7 hypothetical protein compare
UW163_RS05900 -0.7 -1.5 general secretion pathway protein GspL compare
UW163_RS03425 -0.7 -1.8 short chain dehydrogenase compare
UW163_RS09680 -0.7 -1.3 SAM-dependent methyltransferase compare
UW163_RS19890 -0.7 -2.6 hypothetical protein compare
UW163_RS01395 -0.7 -2.3 molybdopterin-guanine dinucleotide biosynthesis protein B compare
UW163_RS14850 -0.7 -1.6 hypothetical protein compare
UW163_RS24240 -0.7 -0.9 hypothetical protein compare
UW163_RS22430 -0.7 -4.2 two-component sensor histidine kinase compare
UW163_RS00315 -0.7 -1.9 class II aldolase compare
UW163_RS02780 -0.7 -3.4 TlpA family protein disulfide reductase compare
UW163_RS08355 -0.6 -1.4 metal-binding protein compare
UW163_RS06750 -0.6 -1.7 ABC transporter permease compare
UW163_RS16155 -0.6 -5.5 LysR family transcriptional regulator compare
UW163_RS24715 -0.6 -1.1 hypothetical protein compare
UW163_RS03740 -0.6 -0.9 amino acid ABC transporter substrate-binding protein compare
UW163_RS01465 -0.6 -1.4 lipopolysaccharide heptosyltransferase II compare
UW163_RS19920 -0.6 -1.0 peptidase compare
UW163_RS11705 -0.6 -1.4 LacI family transcriptional regulator compare
UW163_RS17580 -0.6 -3.6 MarR family transcriptional regulator compare
UW163_RS21355 -0.6 -2.3 type II toxin-antitoxin system HipA family toxin compare
UW163_RS04900 -0.6 -3.7 glutamate--cysteine ligase compare
UW163_RS17410 -0.6 -1.1 DNA-binding protein compare
UW163_RS05235 -0.6 -1.7 hypothetical protein compare
UW163_RS02415 -0.6 -2.5 ribosomal subunit interface protein compare
UW163_RS04895 -0.6 -4.2 potassium transporter Kef compare
UW163_RS23055 -0.6 -2.1 beta-ketoacyl-ACP synthase III compare
UW163_RS12525 -0.6 -1.2 peptidoglycan endopeptidase compare
UW163_RS06920 -0.6 -1.4 alpha/beta hydrolase compare
UW163_RS01625 -0.6 -2.5 recombinase RecA compare
UW163_RS05915 -0.6 -1.1 type II secretion system protein GspI compare
UW163_RS09690 -0.6 -2.4 MipA/OmpV family protein compare
UW163_RS17760 -0.6 -3.0 IucA/IucC family siderophore biosynthesis protein compare
UW163_RS14930 -0.6 -2.2 D-alanyl-D-alanine endopeptidase compare
UW163_RS12730 -0.6 -1.5 type IV pilus biogenesis/stability protein PilW compare
UW163_RS22750 -0.6 -1.1 PadR family transcriptional regulator compare
UW163_RS22035 -0.6 -2.9 TetR/AcrR family transcriptional regulator compare
UW163_RS16740 -0.6 -3.1 NAD(P)-dependent oxidoreductase compare
UW163_RS01855 -0.6 -1.8 branched-chain amino acid ABC transporter permease compare
UW163_RS11780 -0.6 -0.8 short-chain dehydrogenase compare
UW163_RS02595 -0.6 -2.2 heme A synthase compare
UW163_RS01430 -0.6 -3.4 pyruvate kinase compare
UW163_RS05910 -0.6 -1.6 general secretion pathway protein GspJ compare
UW163_RS02720 -0.6 -1.7 glutathione synthase compare
UW163_RS11715 -0.6 -2.7 sugar ABC transporter ATP-binding protein compare
UW163_RS25200 -0.6 -2.1 hypothetical protein compare
UW163_RS06195 -0.6 -1.3 N-acylglucosamine 2-epimerase compare
UW163_RS06970 -0.6 -1.4 cytochrome o ubiquinol oxidase subunit I compare
UW163_RS21470 -0.6 -1.1 class II fumarate hydratase compare


Specific Phenotypes

None in this experiment

For Ralstonia solanacearum UW163 in m63_quarter_strength experiments