| | gene | name | fitness | t score | description | |
|---|
| b2318 | truA | -3.5 | -4.1 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2007 | yeeX | -3.4 | -3.9 | conserved protein (RefSeq) | compare |
| b0437 | clpP | -3.2 | -7.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0149 | mrcB | -3.0 | -11.2 | penicillin-binding protein 1b (NCBI) | compare |
| b2504 | yfgG | -2.7 | -5.0 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b3741 | gidA | -2.6 | -4.7 | glucose-inhibited division protein A (NCBI) | compare |
| b3778 | rep | -2.6 | -8.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2501 | ppk | -2.6 | -7.9 | polyphosphate kinase (NCBI) | compare |
| b1130 | phoP | -2.6 | -6.9 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b4702 | mgtL | -2.5 | -3.7 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1167 | ymgC | -2.5 | -2.8 | hypothetical protein (NCBI) | compare |
| b3204 | ptsN | -2.5 | -5.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3792 | wzxE | -2.4 | -9.0 | O-antigen translocase (NCBI) | compare |
| b3164 | pnp | -2.4 | -3.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4049 | dusA | -2.3 | -8.0 | tRNA-dihydrouridine synthase A (RefSeq) | conserved |
| b0888 | trxB | -2.3 | -2.7 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1129 | phoQ | -2.3 | -7.6 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0145 | dksA | -2.3 | -3.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3725 | pstB | -2.3 | -1.6 | phosphate transporter subunit (NCBI) | compare |
| b0438 | clpX | -2.2 | -6.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0402 | proY | -2.2 | -9.4 | predicted cryptic proline transporter (NCBI) | compare |
| b3644 | yicC | -2.2 | -6.2 | hypothetical protein (NCBI) | compare |
| b1293 | sapB | -2.2 | -2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0741 | pal | -2.2 | -3.8 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4242 | mgtA | -2.1 | -14.3 | magnesium transporter (NCBI) | compare |
| b0143 | pcnB | -2.1 | -6.6 | poly(A) polymerase I (VIMSS) | compare |
| b1192 | ldcA | -2.1 | -4.4 | L,D-carboxypeptidase A (NCBI) | compare |
| b0726 | sucA | -2.1 | -2.7 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2567 | rnc | -2.0 | -1.9 | ribonuclease III (NCBI) | compare |
| b2297 | pta | -2.0 | -1.3 | phosphate acetyltransferase (NCBI) | compare |
| b4480 | hdfR | -1.9 | -5.9 | transcriptional regulator HdfR (NCBI) | compare |
| b1105 | ycfM | -1.9 | -3.1 | predicted outer membrane lipoprotein (NCBI) | compare |
| b3764 | yifE | -1.9 | -3.6 | hypothetical protein (NCBI) | compare |
| b3649 | rpoZ | -1.8 | -3.1 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3839 | tatC | -1.8 | -8.5 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1286 | rnb | -1.8 | -2.9 | exoribonuclease II (NCBI) | compare |
| b1085 | b1085 | -1.8 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0142 | folK | -1.8 | -1.5 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3871 | bipA | -1.8 | -9.3 | GTP-binding protein (NCBI) | compare |
| b3706 | trmE | -1.8 | -5.2 | tRNA modification GTPase (NCBI) | compare |
| b3405 | ompR | -1.8 | -4.5 | osmolarity response regulator (NCBI) | compare |
| b0500 | ybbD | -1.7 | -2.5 | hypothetical protein (RefSeq) | compare |
| b3121 | yhaC | -1.7 | -2.5 | hypothetical protein (NCBI) | compare |
| b3205 | yhbJ | -1.7 | -3.8 | hypothetical protein (NCBI) | compare |
| b1182 | hlyE | -1.7 | -2.8 | hemolysin E (VIMSS) | compare |
| b3423 | glpR | -1.7 | -7.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1729 | ydjN | -1.7 | -3.2 | predicted transporter (NCBI) | compare |
| b3740 | gidB | -1.6 | -9.1 | glucose-inhibited division protein B (NCBI) | conserved |
| b3414 | gntY | -1.6 | -5.7 | predicted gluconate transport associated protein (NCBI) | compare |
| b3005 | exbD | -1.6 | -4.6 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2894 | xerD | -1.6 | -1.5 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1863 | ruvC | -1.6 | -3.0 | Holliday junction resolvase (NCBI) | compare |
| b1842 | holE | -1.6 | -1.5 | DNA polymerase III, theta subunit (NCBI) | compare |
| b1291 | sapD | -1.6 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2479 | gcvR | -1.5 | -3.2 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b1235 | rssB | -1.5 | -5.0 | response regulator of RpoS (NCBI) | compare |
| b2814 | metZ | -1.5 | -1.7 | tRNA-Met (NCBI) | compare |
| b1860 | ruvB | -1.5 | -1.7 | Holliday junction DNA helicase B (NCBI) | compare |
| b3791 | rffA | -1.5 | -6.8 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3780 | rhlB | -1.5 | -8.7 | ATP-dependent RNA helicase (NCBI) | compare |
| b4234 | yjgA | -1.5 | -3.3 | hypothetical protein (NCBI) | compare |
| b3755 | yieP | -1.5 | -6.0 | predicted transcriptional regulator (NCBI) | compare |
| b1920 | fliY | -1.5 | -2.2 | cystine transporter subunit (NCBI) | compare |
| b2937 | speB | -1.5 | -5.7 | agmatinase (NCBI) | compare |
| b0890 | ftsK | -1.5 | -5.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2820 | recB | -1.5 | -2.1 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3728 | pstS | -1.5 | -4.0 | phosphate transporter subunit (NCBI) | compare |
| b1728 | ydjM | -1.4 | -2.7 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b3006 | exbB | -1.4 | -5.7 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b3183 | obgE | -1.4 | -1.5 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3742 | mioC | -1.4 | -4.1 | flavodoxin (NCBI) | compare |
| b4481 | rffT | -1.4 | -5.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2906 | visC | -1.4 | -4.8 | hypothetical protein (NCBI) | compare |
| b4551 | yheV | -1.4 | -2.6 | hypothetical protein (NCBI) | compare |
| b4201 | priB | -1.4 | -1.6 | primosomal replication protein N (NCBI) | compare |
| b1162 | ycgE | -1.4 | -4.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3229 | sspA | -1.4 | -3.4 | stringent starvation protein A (NCBI) | compare |
| b0630 | lipB | -1.4 | -1.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1273 | yciN | -1.4 | -1.1 | hypothetical protein (NCBI) | compare |
| b0471 | ybaB | -1.3 | -2.7 | hypothetical protein (NCBI) | compare |
| b2938 | speA | -1.3 | -7.3 | arginine decarboxylase (NCBI) | compare |
| b1936 | intG | -1.3 | -2.2 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b0200 | gmhB | -1.3 | -1.6 | hypothetical protein (NCBI) | compare |
| b1123 | potD | -1.3 | -4.5 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b0388 | aroL | -1.3 | -4.2 | shikimate kinase II (NCBI) | compare |
| b3979 | thrT | -1.3 | -1.1 | tRNA-Thr (NCBI) | compare |
| b3916 | pfkA | -1.3 | -2.7 | 6-phosphofructokinase (NCBI) | compare |
| b3483 | yhhH | -1.3 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0585 | fes | -1.3 | -4.4 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b2106 | yohM | -1.3 | -4.6 | membrane protein conferring nickel and cobalt resistance (NCBI) | conserved |
| b1394 | paaG | -1.3 | -1.9 | enoyl-CoA hydratase (NCBI) | compare |
| b3290 | trkA | -1.3 | -2.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0738 | tolR | -1.3 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0688 | pgm | -1.3 | -2.6 | phosphoglucomutase (NCBI) | compare |
| b1865 | nudB | -1.3 | -1.0 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0740 | tolB | -1.3 | -3.1 | translocation protein TolB precursor (NCBI) | compare |
| b0721 | sdhC | -1.3 | -3.5 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b4208 | cycA | -1.2 | -6.4 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b4589 | ylcI | -1.2 | -1.8 | hypothetical protein (RefSeq) | compare |
| b2688 | gshA | -1.2 | -5.2 | glutamate--cysteine ligase (NCBI) | compare |
| b1138 | ymfE | -1.2 | -1.4 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1361 | ydaW | -1.2 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3613 | yibP | -1.2 | -4.4 | putative membrane protein (VIMSS) | compare |
| b1084 | rne | -1.2 | -3.1 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b0660 | ybeZ | -1.2 | -2.6 | predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) | compare |
| b3811 | xerC | -1.2 | -1.9 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2168 | fruK | -1.2 | -1.1 | 1-phosphofructokinase (NCBI) | compare |
| b2822 | recC | -1.2 | -3.4 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2804 | fucU | -1.2 | -2.2 | L-fucose mutarotase (NCBI) | compare |
| b4592 | yccB | -1.2 | -1.5 | hypothetical protein (RefSeq) | compare |
| b3198 | kdsC | -1.2 | -1.8 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2635 | ypjK | -1.2 | -2.2 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0737 | tolQ | -1.2 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3931 | hslU | -1.2 | -7.1 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1307 | pspD | -1.2 | -1.6 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b0739 | tolA | -1.1 | -2.9 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2699 | recA | -1.1 | -1.6 | recombinase A (NCBI) | compare |
| b2946 | yggJ | -1.1 | -3.4 | orf, hypothetical protein (VIMSS) | compare |
| b3398 | yrfF | -1.1 | -2.7 | predicted inner membrane protein (NCBI) | compare |
| b2642 | yfjW | -1.1 | -2.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2912 | ygfA | -1.1 | -2.0 | putative ligase (VIMSS) | compare |
| b3781 | trxA | -1.1 | -3.0 | thioredoxin 1 (VIMSS) | compare |
| b1576 | ydfD | -1.1 | -2.1 | Qin prophage; predicted protein (NCBI) | compare |
| b3863 | polA | -1.1 | -1.0 | DNA polymerase I (NCBI) | compare |
| b1992 | cobS | -1.1 | -1.9 | cobalamin synthase (NCBI) | compare |
| b3169 | nusA | -1.1 | -2.0 | transcription elongation factor NusA (NCBI) | compare |
| b0784 | moaD | -1.1 | -2.2 | molybdopterin synthase, small subunit (NCBI) | compare |
| b2528 | iscA | -1.1 | -1.3 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b2576 | srmB | -1.1 | -2.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b0636 | ybeA | -1.1 | -3.2 | hypothetical protein (NCBI) | compare |
| b1861 | ruvA | -1.0 | -1.7 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1493 | gadB | -1.0 | -1.5 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b0590 | fepD | -1.0 | -3.5 | iron-enterobactin transporter subunit (NCBI) | compare |
| b4180 | rlmB | -1.0 | -4.4 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b4371 | rsmC | -1.0 | -4.4 | 16S ribosomal RNA m2G1207 methyltransferase (NCBI) | compare |
| b1446 | ydcY | -1.0 | -1.2 | hypothetical protein (NCBI) | compare |
| b3836 | b3836 | -1.0 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b3963 | fabR | -1.0 | -5.9 | DNA-binding transcriptional repressor (RefSeq) | compare |
| b3932 | hslV | -1.0 | -6.2 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b1144 | ymfJ | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0226 | dinJ | -1.0 | -1.7 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b0589 | fepG | -1.0 | -3.9 | iron-enterobactin transporter subunit (NCBI) | compare |
| b1126 | potA | -1.0 | -3.5 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b1497 | b1497 | -1.0 | -2.4 | putative enzyme (VIMSS) | compare |
| b4482 | yigE | -1.0 | -3.1 | hypothetical protein (NCBI) | compare |
| b3463 | ftsE | -1.0 | -3.1 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2569 | lepA | -1.0 | -2.7 | GTP-binding protein LepA (NCBI) | compare |
| b3180 | yhbY | -1.0 | -3.5 | predicted RNA-binding protein (NCBI) | compare |
| b0723 | sdhA | -1.0 | -5.2 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b1676 | pykF | -0.9 | -2.5 | pyruvate kinase (NCBI) | compare |
| b1343 | dbpA | -0.9 | -2.8 | ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) | compare |
| b3844 | fre | -0.9 | -3.4 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0418 | pgpA | -0.9 | -3.1 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b3120 | yhaB | -0.9 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b4045 | yjbJ | -0.9 | -1.8 | predicted stress response protein (NCBI) | compare |
| b2330 | yfcB | -0.9 | -1.5 | putative adenine-specific methylase (VIMSS) | compare |
| b4222 | ytfP | -0.9 | -3.2 | hypothetical protein (NCBI) | compare |
| b3029 | ygiN | -0.9 | -1.7 | quinol monooxygenase (NCBI) | compare |
| b3462 | ftsX | -0.9 | -3.7 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0728 | sucC | -0.9 | -3.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b3838 | tatB | -0.9 | -4.3 | sec-independent translocase (NCBI) | compare |
| b0949 | uup | -0.9 | -4.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1409 | ynbB | -0.9 | -3.7 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b4171 | miaA | -0.9 | -3.4 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1382 | ynbE | -0.9 | -1.4 | predicted lipoprotein (NCBI) | compare |
| b1125 | potB | -0.9 | -2.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3237 | argR | -0.9 | -2.8 | arginine repressor (NCBI) | compare |
| b1370 | insH-5 | -0.9 | -1.3 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b1918 | yecS | -0.9 | -2.1 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2947 | gshB | -0.9 | -2.7 | glutathione synthetase (NCBI) | compare |
| b1363 | trkG | -0.9 | -3.0 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1161 | ycgX | -0.9 | -1.4 | hypothetical protein (NCBI) | compare |
| b0118 | acnB | -0.9 | -2.1 | aconitate hydratase (NCBI) | compare |
| b0592 | fepB | -0.9 | -4.3 | iron-enterobactin transporter subunit (NCBI) | compare |
| b1837 | yebW | -0.9 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4533 | ynfO | -0.8 | -1.4 | Qin prophage; predicted protein (NCBI) | compare |
| b0724 | sdhB | -0.8 | -3.0 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2055 | wcaE | -0.8 | -2.0 | predicted glycosyl transferase (NCBI) | compare |
| b0729 | sucD | -0.8 | -1.6 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3652 | recG | -0.8 | -5.1 | ATP-dependent DNA helicase (NCBI) | compare |
| b1295 | ymjA | -0.8 | -1.3 | hypothetical protein (NCBI) | compare |
| b1252 | tonB | -0.8 | -1.6 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1753 | ynjA | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b0053 | surA | -0.8 | -2.7 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1231 | tyrT | -0.8 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b2689 | yqaA | -0.8 | -1.7 | conserved inner membrane protein (NCBI) | compare |
| b3404 | envZ | -0.8 | -5.3 | osmolarity sensor protein (NCBI) | compare |
| b0588 | fepC | -0.8 | -3.8 | iron-enterobactin transporter subunit (NCBI) | compare |
| b4502 | yeiW | -0.8 | -2.3 | hypothetical protein (NCBI) | compare |
| b2683 | ygaH | -0.8 | -2.5 | predicted inner membrane protein (NCBI) | compare |
| b1835 | yebU | -0.8 | -1.9 | putative nucleolar proteins (VIMSS) | compare |
| b1063 | yceB | -0.8 | -1.6 | predicted lipoprotein (NCBI) | compare |
| b0393 | rdgC | -0.8 | -4.3 | recombination associated protein (NCBI) | compare |
| b2796 | sdaC | -0.8 | -5.3 | predicted serine transporter (NCBI) | compare |
| b1058 | yceO | -0.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b2110 | yehC | -0.8 | -2.4 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b3442 | yhhZ | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b2532 | yfhQ | -0.8 | -2.1 | predicted methyltransferase (NCBI) | compare |
| b4497 | yeeL | -0.8 | -3.1 | no description | compare |
| b1475 | fdnH | -0.8 | -2.8 | formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible (NCBI) | compare |