Experiment set2IT037 for Agrobacterium fabrum C58

Compare to:

Sucrose carbon source

200 most important genes:

  gene name fitness t score description  
Atu1850 -8.2 -5.7 phosphoribosylformylglycinamidine synthetase II compare
Atu2289 -8.0 -9.5 anthranilate synthase component I and II compare
Atu0486 -7.9 -5.4 dihydroorotate dehydrogenase compare
Atu1750 -7.7 -6.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu1308 -7.6 -7.4 aspartate carbamoyl transferase catalytic subunit compare
Atu2709 -7.5 -16.8 3-isopropylmalate dehydratase, large subunit compare
Atu0400 -7.3 -5.1 orotate phosphoribosyltransferase compare
Atu2726 -7.3 -19.0 pyruvate carboxylase compare
Atu0099 -7.3 -11.2 prephenate dehydratase compare
Atu0679 -7.2 -5.0 ATP phosphoribosyltransferase compare
Atu0038 -7.1 -6.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2036 -7.0 -13.5 acetolactate synthase III, large subunit compare
Atu1687 -7.0 -11.5 anthranilate phosphoribosyltransferase compare
Atu0298 -7.0 -6.8 orotidine 5 compare
Atu2791 -6.9 -8.3 3-isopropylmalate dehydrogenase compare
Atu2650 -6.7 -14.3 glycerol-3-phosphate dehydrogenase compare
Atu1141 -6.6 -9.1 Phosphoribosylglycinamide synthetase compare
Atu3755 -6.6 -4.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0537 -6.6 -4.5 histidinol dehydrogenase compare
Atu3706 -6.5 -10.0 D-3-phosphoglycerate dehydrogenase compare
Atu3754 -6.5 -3.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1307 -6.5 -8.9 dihydroorotase compare
Atu3707 -6.5 -4.4 phosphoserine aminotransferase compare
Atu0678 -6.4 -4.4 histidyl-tRNA synthetase compare
Atu1075 -6.3 -8.6 amidophosphoribosyltransferase compare
Atu1205 -6.3 -16.3 threonine dehydratase compare
Atu3885 -6.3 -9.6 inositol monophosphatase compare
Atu2718 -6.3 -10.5 homoserine O-succinyltransferase compare
Atu0017 -6.2 -4.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2040 -6.2 -6.0 phosphoserine phosphatase compare
Atu0399 -6.2 -7.4 dihydroorotase compare
Atu1140 -6.2 -6.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2264 -6.2 -14.5 2-isopropylmalate synthase compare
Atu0432 -6.1 -10.7 O-succinylhomoserine sulfhydrylase compare
Atu3783 -6.1 -18.4 glutamate synthase subunit beta compare
Atu3784 -6.1 -30.8 glutamate synthase large subunit compare
Atu1588 -6.1 -10.9 homoserine dehydrogenase compare
Atu2747 -6.0 -10.7 hypothetical protein compare
Atu0792 -6.0 -7.9 hypothetical protein compare
Atu1845 -5.9 -6.4 phosphoribosylformylglycinamidine synthase I compare
Atu0647 -5.7 -5.6 phosphoribosylamine--glycine ligase compare
Atu1688 -5.6 -9.3 indole-3-glycerol-phosphate synthase compare
Atu2790 -5.4 -2.8 3-isopropylmalate dehydratase, small subunit compare
Atu0043 -5.4 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu2015 -5.2 -17.0 aminotransferase compare
Atu0041 -5.2 -3.6 glutamine amidotransferase compare
Atu0039 -5.2 -3.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu1030 -5.2 -3.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1686 -5.1 -19.9 peptidyl-prolyl cis-trans isomerse D compare
Atu1844 -5.0 -5.1 Phosphoribosylformylglycinamidine synthetase compare
Atu3483 -5.0 -8.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3482 -4.8 -13.6 pantoate--beta-alanine ligase compare
Atu1456 -4.8 -15.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0598 -4.7 -13.2 phosphogluconate dehydratase compare
Atu1589 -4.7 -12.0 aminotransferase, class I compare
Atu0876 -4.2 -2.9 superoxide dismutase compare
Atu3731 -4.1 -11.9 5-formyltetrahydrofolate cyclo-ligase compare
Atu2548 -4.0 -17.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0641 -4.0 -5.6 hypothetical protein compare
Atu1359 -3.9 -2.0 dnaK deletion suppressor protein compare
Atu0595 -3.9 -11.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0184 -3.8 -5.2 glucokinase compare
Atu1685 -3.8 -2.0 hypothetical protein compare
Atu1620 -3.8 -16.2 triosephosphate isomerase compare
Atu3739 -3.5 -4.4 phosphoglycerate kinase compare
Atu4096 -3.5 -9.1 nicotinate-nucleotide pyrophosphorylase compare
Atu0592 -3.4 -8.1 ABC transporter, membrane spanning protein compare
Atu0591 -3.3 -14.4 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1454 -3.3 -10.7 siroheme synthase compare
Atu0401 -3.3 -10.3 fructokinase compare
Atu2155 -3.3 -21.0 methionine synthase compare
Atu4098 -3.2 -15.6 quinolinate synthetase compare
Atu0723 -3.1 -3.0 FAD dependent oxidoreductase compare
Atu0040 -3.1 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2205 -3.0 -7.3 transcriptional regulator, MarR family compare
Atu3289 -2.9 -6.4 thiamine-phosphate pyrophosphorylase compare
Atu3469 -2.9 -4.3 phosphoglyceromutase compare
Atu3997 -2.9 -16.2 biotin synthetase compare
Atu2569 -2.8 -16.8 thiamine biosynthesis protein compare
Atu3290 -2.8 -17.2 phosphomethylpyrimidine kinase compare
Atu0593 -2.8 -10.1 ABC transporter, membrane spanning protein compare
Atu1455 -2.8 -4.4 hypothetical protein compare
Atu0434 -2.7 -2.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4097 -2.7 -12.6 L-aspartate oxidase compare
Atu3288 -2.7 -8.5 hydroxyethylthiazole kinase compare
Atu1446 -2.6 -3.2 two component response regulator compare
Atu1462 -2.5 -14.0 glycine cleavage system protein P2 compare
Atu4000 -2.4 -13.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3998 -2.4 -13.9 8-amino-7-oxononanoate synthase compare
Atu1748 -2.4 -10.1 NIFU-like protein compare
Atu1464 -2.3 -6.3 glycine cleavage system T protein, aminomethyltransferase compare
Atu4075 -2.3 -7.1 glycogen synthase compare
Atu0029 -2.3 -7.4 S-adenosylhomocysteine hydrolase compare
Atu0030 -2.2 -2.5 phosphocarrier protein HPr compare
Atu1463 -2.2 -7.9 glycine cleavage system component H compare
Atu8115 -2.1 -4.4 Hypothetical Protein compare
Atu2127 -2.0 -7.6 L-carnitine dehydratase compare
Atu6098 -1.9 -1.0 transcriptional regulator, HTH family compare
Atu4001 -1.9 -7.9 3-oxoacyl-ACP synthase compare
Atu0594 -1.8 -8.4 alpha-glucosidase conserved
Atu0185 -1.8 -2.6 methylglyoxal synthase compare
Atu1604 -1.8 -12.2 poly-beta-hydroxybutyrate synthase compare
Atu3999 -1.8 -3.8 dithiobiotin synthetase compare
Atu1163 -1.6 -3.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2209 -1.6 -5.2 pyrroline-5-carboxylate reductase compare
Atu0422 -1.6 -3.0 ABC transporter, membrane spanning protein compare
Atu4616 -1.5 -2.1 dTDP-4-dehydrorhamnose reductase compare
Atu0189 -1.5 -3.8 ABC transporter, membrane spanning protein (peptide) compare
Atu4711 -1.5 -5.9 two component sensor kinase compare
Atu0346 -1.4 -1.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1457 -1.3 -1.6 hypothetical protein compare
Atu1891 -1.3 -3.2 cobalamin biosynthesis protein compare
Atu4773 -1.3 -2.3 two component response regulator compare
Atu6114 -1.3 -2.2 hypothetical protein compare
Atu1810 -1.3 -1.7 hypothetical protein compare
Atu2800 -1.3 -2.7 precorrin-3B C17-methyltransferase compare
Atu0421 -1.2 -1.8 ABC transporter, membrane spanning protein compare
Atu2555 -1.2 -3.6 L-lysine 2,3-aminomutase compare
Atu1219 -1.2 -1.5 hypothetical protein compare
Atu3763 -1.2 -1.5 hypothetical protein compare
Atu2123 -1.2 -6.8 methylenetetrahydrofolate reductase compare
Atu2376 -1.2 -0.9 hypothetical protein compare
Atu1542 -1.2 -4.7 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0777 -1.2 -1.1 hypothetical protein compare
Atu0188 -1.1 -3.2 ABC transporter, membrane spanning protein (peptide) compare
Atu1572 -1.1 -4.7 hydrolase compare
Atu4173 -1.1 -2.8 phosphoenolpyruvate-protein phosphotransferase compare
Atu1223 -1.1 -1.8 hypothetical protein compare
Atu4144 -1.1 -1.3 hypothetical protein compare
Atu2554 -1.0 -2.4 lysyl-tRNA synthetase compare
Atu0031 -1.0 -1.4 PTS system, IIA component compare
Atu3908 -1.0 -5.5 GntR family transcriptional regulator compare
Atu1774 -1.0 -4.4 ABC transporter, substrate binding protein (peptide) compare
Atu2808 -1.0 -6.1 cobyric acid synthase compare
Atu2684 -1.0 -2.1 hypothetical protein compare
Atu2801 -1.0 -3.5 precorrin-2 C20 methyltransferase compare
Atu4108 -0.9 -6.0 ribonuclease D compare
Atu4317 -0.9 -1.9 TetR family transcriptional regulator compare
Atu0912 -0.9 -1.1 Na+/H+ antiporter compare
Atu2795 -0.9 -4.2 cobalamin biosynthetic protein compare
Atu4187 -0.9 -1.5 tRNA-Met compare
Atu2770 -0.9 -4.4 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu0769 -0.9 -1.8 protoheme IX farnesyltransferase compare
Atu3518 -0.9 -5.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2807 -0.9 -4.1 cob(I)alamin adenosyltransferase compare
Atu2442 -0.9 -3.1 hypothetical protein compare
Atu0332 -0.8 -4.4 RNA polymerase sigma-54 factor compare
Atu2804 -0.8 -5.8 cobaltochelatase subunit compare
Atu1028 -0.8 -1.8 hypothetical protein compare
Atu4613 -0.8 -5.7 glycosyltransferase compare
Atu8082 -0.8 -2.1 hypothetical protein compare
Atu0190 -0.8 -4.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu5513 -0.8 -1.4 cold shock protein compare
Atu4618 -0.8 -5.7 dTDP-rhamnose-3,5-epimerase compare
Atu4617 -0.8 -5.0 dTDP-D-glucose-4,6-dehydratase compare
Atu0977 -0.8 -3.0 serine protease DO-like protease compare
Atu3496 -0.8 -2.6 hypothetical protein compare
Atu0659 -0.8 -3.4 NTP pyrophosphohydrolase, MutT family compare
Atu0601 -0.8 -5.5 oxidoreductase compare
Atu0812 -0.8 -2.0 hypothetical protein compare
Atu5157 -0.7 -1.6 hypothetical protein compare
Atu2207 -0.7 -2.4 two component sensor kinase compare
Atu3727 -0.7 -3.3 hypothetical protein compare
Atu0361 -0.7 -1.7 transcriptional regulator compare
Atu2821 -0.7 -2.8 transcriptional regulator, GntR family compare
Atu4072 -0.7 -1.5 nodulation protein N compare
Atu2020 -0.7 -1.2 transcriptional regulator, TetR family compare
Atu3750 -0.7 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu2802 -0.7 -5.2 precorrin-8X methylmutase compare
Atu4452 -0.7 -1.9 hypothetical protein compare
Atu3486 -0.7 -1.3 DeoR family transcriptional regulator compare
Atu2799 -0.7 -2.8 precorrin-6x reductase compare
Atu0354 -0.7 -1.4 ferric uptake regulator compare
Atu0149 -0.7 -1.8 enoyl-(acyl-carrier-protein) reductase compare
Atu1904 -0.7 -2.0 transcriptional regulator compare
Atu0677 -0.7 -1.0 hypothetical protein compare
Atu2805 -0.7 -2.5 cobalamin synthesis protein compare
Atu4217 -0.7 -1.3 TetR family transcriptional regulator compare
Atu2057 -0.6 -1.7 DNA helicase II compare
Atu2809 -0.6 -3.6 cobalamin biosynthesis protein compare
Atu4615 -0.6 -3.5 glucose-1-phosphate thymidylyltransferase compare
Atu0291 -0.6 -3.8 hypothetical protein compare
Atu2163 -0.6 -0.9 hypothetical protein compare
Atu0280 -0.6 -1.3 hypothetical protein compare
Atu2125 -0.6 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0142 -0.6 -1.4 cytochrome o ubiquinol oxidase subunit II compare
Atu3075 -0.6 -3.1 TetR family transcriptional regulator compare
Atu0375 -0.6 -1.4 small heat shock protein compare
Atu2803 -0.6 -2.0 Cobalamin biosynthesis associated protein compare
Atu1077 -0.6 -2.0 DNA repair protein compare
Atu1546 -0.6 -2.1 transcriptional regulator, MerR family compare
Atu0816 -0.6 -5.0 sulfate adenylate transferase, subunit 1 compare
Atu1812 -0.6 -2.5 hypothetical protein compare
Atu3287 -0.6 -2.0 thiamine biosynthesis associated protein compare
Atu2368 -0.6 -1.1 hypothetical protein compare
Atu2798 -0.6 -2.1 precorrin-6y methyltransferase compare
Atu0744 -0.6 -1.9 hypothetical protein compare
Atu8158 -0.6 -2.1 hypothetical protein compare
Atu1699 -0.6 -2.0 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu5158 -0.6 -1.4 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source Sucrose in Agrobacterium fabrum C58

For carbon source Sucrose across organisms