Experiment set2IT036 for Ralstonia solanacearum UW163

200 most important genes:

gene	name	fitness	t score	description
UW163_RS02975		-2.4	-2.1	hypothetical protein
UW163_RS13545		-2.3	-2.9	disulfide bond formation protein B
UW163_RS10095		-2.1	-3.2	ribonuclease G
UW163_RS00655		-2.0	-1.3	protein TolQ
UW163_RS23770		-1.9	-2.1	hypothetical protein
UW163_RS02195		-1.9	-3.1	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
UW163_RS11865		-1.7	-2.3	septum formation protein Maf
UW163_RS09920		-1.6	-1.4	DNA polymerase I
UW163_RS01465		-1.6	-2.1	lipopolysaccharide heptosyltransferase II
UW163_RS07610		-1.6	-3.6	carbohydrate kinase family protein
UW163_RS02035		-1.6	-3.0	Glu/Leu/Phe/Val dehydrogenase
UW163_RS02805		-1.5	-1.9	alpha/beta hydrolase
UW163_RS09170		-1.5	-1.2	hypothetical protein
UW163_RS17125		-1.5	-8.8	phosphogluconate dehydratase
UW163_RS14815		-1.5	-5.4	class I poly(R)-hydroxyalkanoic acid synthase
UW163_RS20030		-1.5	-2.0	multidrug MFS transporter
UW163_RS02715		-1.5	-1.5	PTS fructose transporter subunit IIA
UW163_RS10110		-1.3	-1.9	ribosome silencing factor
UW163_RS09435		-1.3	-1.9	heme biosynthesis protein HemY
UW163_RS08020		-1.3	-3.7	hydrogen peroxide-inducible genes activator
UW163_RS08910		-1.3	-1.7	phosphoribosylglycinamide formyltransferase
UW163_RS00625		-1.2	-1.8	7-cyano-7-deazaguanine synthase QueC
UW163_RS01460		-1.2	-1.6	zinc-finger domain-containing protein
UW163_RS11945		-1.2	-1.8	DUF4845 domain-containing protein
UW163_RS24715		-1.2	-1.7	hypothetical protein
UW163_RS17055		-1.1	-1.7	amino acid ABC transporter substrate-binding protein
UW163_RS06975		-1.1	-1.6	cytochrome o ubiquinol oxidase subunit III
UW163_RS17310		-1.1	-1.9	universal stress protein
UW163_RS11765		-1.1	-1.9	Fe-S assembly protein IscX
UW163_RS01780		-1.1	-1.3	HlyC/CorC family transporter
UW163_RS24355		-1.0	-1.3	hypothetical protein
UW163_RS08435		-1.0	-1.5	DUF3579 domain-containing protein
UW163_RS19825		-1.0	-1.9	hypothetical protein
UW163_RS11920		-1.0	-2.0	sugar dehydratase
UW163_RS20025		-1.0	-5.2	EpsG family protein
UW163_RS11110		-0.9	-2.2	3-isopropylmalate dehydratase small subunit
UW163_RS07155		-0.9	-1.3	Co2+/Mg2+ efflux protein ApaG
UW163_RS04975		-0.9	-3.7	ATP-dependent DNA helicase Rep
UW163_RS12210		-0.9	-2.5	single-stranded-DNA-specific exonuclease RecJ
UW163_RS14505		-0.9	-1.7	BolA family transcriptional regulator
UW163_RS19990		-0.9	-5.2	acetyltransferase
UW163_RS22260		-0.9	-1.8	hypothetical protein
UW163_RS13460		-0.9	-1.2	ribonuclease
UW163_RS18220		-0.9	-2.0	DUF802 domain-containing protein
UW163_RS25085		-0.9	-1.9	hypothetical protein
UW163_RS14630		-0.9	-1.2	peptidylprolyl isomerase
UW163_RS00630		-0.9	-2.2	tol-pal system protein YbgF
UW163_RS12955		-0.9	-1.8	hypothetical protein
UW163_RS00925		-0.9	-1.4	symmetrical bis(5'-nucleosyl)-tetraphosphatase
UW163_RS03035		-0.8	-2.4	antibiotic biosynthesis monooxygenase
UW163_RS07855		-0.8	-1.2	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha
UW163_RS07880		-0.8	-1.4	MarR family transcriptional regulator
UW163_RS10070		-0.8	-2.4	glycosyl transferase
UW163_RS15010		-0.8	-1.5	exodeoxyribonuclease III
UW163_RS16435		-0.8	-3.0	ABC transporter ATP-binding protein
UW163_RS04125		-0.8	-1.4	TetR family transcriptional regulator
UW163_RS25190		-0.8	-1.3	hypothetical protein
UW163_RS03620		-0.8	-1.2	hypothetical protein
UW163_RS03110		-0.8	-2.6	enoyl-CoA hydratase
UW163_RS02040		-0.8	-3.8	LysR family transcriptional regulator
UW163_RS19985		-0.8	-5.9	DegT/DnrJ/EryC1/StrS aminotransferase family protein
UW163_RS05160		-0.8	-2.1	hypothetical protein
UW163_RS10750		-0.8	-0.9	NADH-quinone oxidoreductase subunit A
UW163_RS03905		-0.8	-1.1	tyrosine recombinase XerC
UW163_RS09680		-0.8	-1.4	SAM-dependent methyltransferase
UW163_RS02800		-0.7	-1.2	ferredoxin
UW163_RS12775		-0.7	-1.4	FtsH protease activity modulator HflK
UW163_RS22740		-0.7	-0.9	MarR family transcriptional regulator
UW163_RS17750		-0.7	-2.4	MFS transporter
UW163_RS08415		-0.7	-0.9	membrane protein
UW163_RS25060		-0.7	-1.9	hypothetical protein
UW163_RS14025		-0.7	-2.0	MoxR family ATPase
UW163_RS04730		-0.7	-1.4	LysR family transcriptional regulator
UW163_RS14050		-0.7	-1.4	LysR family transcriptional regulator
UW163_RS08255		-0.7	-0.9	RNA-binding S4 domain-containing protein
UW163_RS06725		-0.7	-1.0	outer membrane lipid asymmetry maintenance protein MlaD
UW163_RS12855		-0.7	-1.4	MurR/RpiR family transcriptional regulator
UW163_RS06745		-0.7	-1.0	ABC transporter ATP-binding protein
UW163_RS07605		-0.7	-1.1	membrane protein
UW163_RS14805		-0.7	-2.8	beta-ketoacyl-ACP reductase
UW163_RS02350		-0.7	-1.6	membrane protein
UW163_RS17200		-0.7	-1.4	hypothetical protein
UW163_RS23525		-0.7	-1.8	hypothetical protein
UW163_RS12460		-0.7	-1.7	peptidyl-prolyl cis-trans isomerase
UW163_RS05895		-0.7	-1.4	general secretion pathway protein GspM
UW163_RS09840		-0.7	-1.0	ABC transporter ATP-binding protein
UW163_RS24800		-0.7	-2.4	hypothetical protein
UW163_RS19920		-0.7	-1.3	peptidase
UW163_RS02450		-0.7	-3.2	GTPase
UW163_RS14495		-0.7	-1.6	peptide-methionine (R)-S-oxide reductase
UW163_RS12525		-0.7	-1.1	peptidoglycan endopeptidase
UW163_RS08485		-0.7	-1.6	site-specific tyrosine recombinase XerD
UW163_RS10665		-0.7	-2.6	DUF3619 domain-containing protein
UW163_RS10820		-0.7	-2.1	DUF2818 domain-containing protein
UW163_RS04990		-0.7	-1.4	hypothetical protein
UW163_RS09070		-0.6	-1.8	sulfite reductase
UW163_RS06635		-0.6	-0.9	iron donor protein CyaY
UW163_RS23100		-0.6	-2.1	GntR family transcriptional regulator
UW163_RS14070		-0.6	-1.5	hypothetical protein
UW163_RS02930		-0.6	-2.2	IclR family transcriptional regulator
UW163_RS13195		-0.6	-0.9	cupin
UW163_RS03355		-0.6	-1.5	short-chain dehydrogenase
UW163_RS21665		-0.6	-2.6	RNA polymerase sigma factor FliA
UW163_RS14160		-0.6	-0.6	dethiobiotin synthase
UW163_RS14000		-0.6	-1.9	methyltransferase
UW163_RS16075		-0.6	-2.0	glycine zipper 2TM domain-containing protein
UW163_RS09935		-0.6	-1.7	ZIP family metal transporter
UW163_RS12305		-0.6	-1.0	DUF455 domain-containing protein
UW163_RS00885		-0.6	-1.4	glycosyltransferase family 2 protein
UW163_RS07140		-0.6	-1.9	anthranilate synthase component I
UW163_RS14365		-0.6	-1.8	GNAT family N-acetyltransferase
UW163_RS20265		-0.6	-0.7	DUF861 domain-containing protein
UW163_RS03360		-0.6	-1.2	NAD-dependent epimerase
UW163_RS02595		-0.6	-1.6	heme A synthase
UW163_RS00665		-0.6	-1.9	NAD(P)-dependent oxidoreductase
UW163_RS20050		-0.6	-2.7	low molecular weight phosphotyrosine protein phosphatase
UW163_RS08305		-0.6	-1.1	ABC transporter permease
UW163_RS22145		-0.6	-1.9	cbb3-type cytochrome C oxidase subunit III
UW163_RS09310		-0.6	-1.7	formate dehydrogenase
UW163_RS09790		-0.6	-0.7	hypothetical protein
UW163_RS07135		-0.6	-1.5	type 1 glutamine amidotransferase
UW163_RS04180		-0.6	-1.9	membrane protein insertion efficiency factor YidD
UW163_RS09610		-0.6	-2.3	type II secretion system protein
UW163_RS10055		-0.6	-1.9	ligase
UW163_RS10935		-0.6	-0.7	isoprenylcysteine carboxylmethyltransferase family protein
UW163_RS11105		-0.6	-1.7	3-isopropylmalate dehydratase large subunit
UW163_RS24595		-0.6	-1.3	hypothetical protein
UW163_RS20715		-0.6	-2.2	MarR family transcriptional regulator
UW163_RS06590		-0.6	-1.1	cytochrome c biogenesis protein ResB
UW163_RS01395		-0.6	-1.8	molybdopterin-guanine dinucleotide biosynthesis protein B
UW163_RS01740		-0.6	-2.3	DUF1571 domain-containing protein
UW163_RS06970		-0.6	-1.4	cytochrome o ubiquinol oxidase subunit I
UW163_RS11815		-0.6	-0.9	hypothetical protein
UW163_RS17060		-0.6	-2.2	LysR family transcriptional regulator
UW163_RS19250		-0.6	-1.0	hypothetical protein
UW163_RS20790		-0.6	-1.5	ArsR family transcriptional regulator
UW163_RS13530		-0.6	-1.2	lysophospholipid transporter LplT
UW163_RS16495		-0.6	-0.9	DNA-binding protein
UW163_RS14705		-0.6	-2.4	squalene synthase HpnD
UW163_RS25175		-0.6	-2.3	hypothetical protein
UW163_RS12345		-0.5	-1.5	site-2 protease family protein
UW163_RS09480		-0.5	-2.3	NAD+ synthase
UW163_RS19600		-0.5	-1.7	EscR/YscR/HrcR family type III secretion system export apparatus protein
UW163_RS20700		-0.5	-1.2	integrase
UW163_RS21625		-0.5	-0.8	hypothetical protein
UW163_RS11015		-0.5	-1.8	hypothetical protein
UW163_RS22610		-0.5	-1.5	flavodoxin family protein
UW163_RS07950		-0.5	-1.9	DNA helicase RecG
UW163_RS24925		-0.5	-2.1	hypothetical protein
UW163_RS20870		-0.5	-1.3	hypothetical protein
UW163_RS03145		-0.5	-2.5	hydroxymethylglutaryl-CoA lyase
UW163_RS20800		-0.5	-1.7	amino acid ABC transporter substrate-binding protein
UW163_RS25125		-0.5	-0.9	hypothetical protein
UW163_RS24180		-0.5	-1.6	hypothetical protein
UW163_RS20770		-0.5	-1.5	transcriptional regulator ArgP
UW163_RS02755		-0.5	-1.4	ATP-dependent protease
UW163_RS21545		-0.5	-1.9	branched-chain amino acid ABC transporter permease
UW163_RS01680		-0.5	-0.7	hypothetical protein
UW163_RS03350		-0.5	-1.1	FAD-binding oxidoreductase
UW163_RS02780		-0.5	-2.5	TlpA family protein disulfide reductase
UW163_RS14535		-0.5	-1.0	DNA-binding response regulator
UW163_RS05000		-0.5	-0.5	acyl-homoserine-lactone synthase
UW163_RS10245		-0.5	-1.4	LamB/YcsF family protein
UW163_RS07055		-0.5	-2.1	redox-regulated ATPase YchF
UW163_RS03705		-0.5	-1.1	methylenetetrahydrofolate reductase [NAD(P)H]
UW163_RS14260		-0.5	-1.6	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
UW163_RS02410		-0.5	-1.9	RNA polymerase sigma-54 factor
UW163_RS15800		-0.5	-1.8	tRNA-Arg
UW163_RS14665		-0.5	-0.8	trigger factor
UW163_RS05750		-0.5	-2.6	MarR family transcriptional regulator
UW163_RS12895		-0.5	-1.7	hypothetical protein
UW163_RS17990		-0.5	-2.4	RidA family protein
UW163_RS02495		-0.5	-1.5	DUF4124 domain-containing protein
UW163_RS17325		-0.5	-1.3	hypothetical protein
UW163_RS14640		-0.5	-1.1	tRNA-Val
UW163_RS13390		-0.5	-1.3	sulfonate ABC transporter
UW163_RS09510		-0.5	-1.0	DNA translocase FtsK
UW163_RS09125		-0.5	-0.8	DNA polymerase III subunit chi
UW163_RS12190		-0.5	-2.6	DUF899 domain-containing protein
UW163_RS25485		-0.5	-0.8	hypothetical protein
UW163_RS12025		-0.5	-1.1	histidine kinase
UW163_RS02810		-0.5	-2.4	D-alanyl-D-alanine carboxypeptidase
UW163_RS05575		-0.5	-1.9	adenylyl-sulfate kinase
UW163_RS23425		-0.5	-2.0	transcriptional regulator
UW163_RS09555		-0.5	-1.8	ATPase
UW163_RS04305		-0.5	-1.7	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
UW163_RS18815		-0.5	-2.2	DNA-3-methyladenine glycosylase I
UW163_RS25345		-0.5	-2.4	hypothetical protein
UW163_RS17530		-0.5	-1.1	flagellar motor switch protein FliN
UW163_RS00895		-0.5	-1.1	glycosyltransferase family 2 protein
UW163_RS07025		-0.5	-0.6	monothiol glutaredoxin, Grx4 family
UW163_RS22750		-0.5	-1.1	PadR family transcriptional regulator
UW163_RS00495		-0.5	-2.4	DUF72 domain-containing protein
UW163_RS03780		-0.5	-1.2	sensor histidine kinase
UW163_RS21335		-0.5	-1.9	VOC family protein
UW163_RS19165		-0.5	-2.6	hypothetical protein
UW163_RS19635		-0.5	-1.5	EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein
UW163_RS10305		-0.5	-1.5	ShlB/FhaC/HecB family hemolysin secretion/activation protein
UW163_RS08240		-0.5	-1.1	formimidoylglutamase
UW163_RS22720		-0.5	-1.3	N-acetyltransferase

Specific Phenotypes

None in this experiment

For Ralstonia solanacearum UW163 in cpg experiments