Experiment set2IT036 for Agrobacterium fabrum C58

Compare to:

Sucrose carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -8.8 -6.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu3754 -8.3 -5.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1140 -8.2 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1850 -7.8 -5.4 phosphoribosylformylglycinamidine synthetase II compare
Atu0038 -7.8 -5.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1687 -7.8 -7.6 anthranilate phosphoribosyltransferase compare
Atu2289 -7.4 -11.4 anthranilate synthase component I and II compare
Atu0486 -7.4 -5.1 dihydroorotate dehydrogenase compare
Atu0099 -7.4 -7.2 prephenate dehydratase compare
Atu2726 -7.3 -15.6 pyruvate carboxylase compare
Atu1308 -7.2 -7.0 aspartate carbamoyl transferase catalytic subunit compare
Atu1075 -7.0 -4.9 amidophosphoribosyltransferase compare
Atu2650 -7.0 -10.7 glycerol-3-phosphate dehydrogenase compare
Atu0679 -6.8 -4.7 ATP phosphoribosyltransferase compare
Atu2036 -6.8 -10.4 acetolactate synthase III, large subunit compare
Atu1844 -6.8 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu0432 -6.7 -9.2 O-succinylhomoserine sulfhydrylase compare
Atu2264 -6.7 -11.2 2-isopropylmalate synthase compare
Atu1205 -6.7 -12.0 threonine dehydratase compare
Atu1141 -6.7 -7.9 Phosphoribosylglycinamide synthetase compare
Atu2709 -6.6 -17.1 3-isopropylmalate dehydratase, large subunit compare
Atu3706 -6.6 -6.4 D-3-phosphoglycerate dehydrogenase compare
Atu3483 -6.6 -6.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1307 -6.6 -7.3 dihydroorotase compare
Atu0298 -6.5 -6.4 orotidine 5 compare
Atu3783 -6.3 -16.9 glutamate synthase subunit beta compare
Atu2040 -6.3 -4.3 phosphoserine phosphatase compare
Atu2791 -6.3 -8.6 3-isopropylmalate dehydrogenase compare
Atu0537 -6.2 -4.3 histidinol dehydrogenase compare
Atu1588 -6.2 -9.4 homoserine dehydrogenase compare
Atu3784 -6.1 -26.8 glutamate synthase large subunit compare
Atu1688 -6.1 -4.2 indole-3-glycerol-phosphate synthase compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu0678 -6.0 -4.1 histidyl-tRNA synthetase compare
Atu3885 -6.0 -7.1 inositol monophosphatase compare
Atu1845 -5.9 -7.0 phosphoribosylformylglycinamidine synthase I compare
Atu0876 -5.9 -4.1 superoxide dismutase compare
Atu2747 -5.9 -15.2 hypothetical protein compare
Atu3755 -5.8 -5.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2718 -5.7 -8.7 homoserine O-succinyltransferase compare
Atu3482 -5.7 -11.6 pantoate--beta-alanine ligase compare
Atu0598 -5.6 -10.0 phosphogluconate dehydratase compare
Atu0400 -5.5 -6.6 orotate phosphoribosyltransferase compare
Atu2015 -5.3 -15.2 aminotransferase compare
Atu2790 -5.1 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu0043 -5.0 -3.4 imidazoleglycerol-phosphate dehydratase compare
Atu1359 -4.9 -2.1 dnaK deletion suppressor protein compare
Atu1686 -4.9 -17.8 peptidyl-prolyl cis-trans isomerse D compare
Atu0647 -4.9 -6.7 phosphoribosylamine--glycine ligase compare
Atu0041 -4.8 -3.3 glutamine amidotransferase compare
Atu0399 -4.8 -7.3 dihydroorotase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu1030 -4.8 -3.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3739 -4.7 -3.9 phosphoglycerate kinase compare
Atu0017 -4.6 -4.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3731 -4.4 -7.6 5-formyltetrahydrofolate cyclo-ligase compare
Atu2548 -4.3 -19.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0792 -4.1 -7.1 hypothetical protein compare
Atu1589 -4.0 -10.3 aminotransferase, class I compare
Atu0184 -4.0 -3.9 glucokinase compare
Atu1456 -4.0 -13.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1446 -3.8 -4.5 two component response regulator compare
Atu0595 -3.6 -12.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0030 -3.6 -2.6 phosphocarrier protein HPr compare
Atu0641 -3.5 -5.5 hypothetical protein compare
Atu1620 -3.5 -11.0 triosephosphate isomerase compare
Atu4096 -3.5 -9.7 nicotinate-nucleotide pyrophosphorylase compare
Atu3469 -3.4 -4.0 phosphoglyceromutase compare
Atu1454 -3.3 -7.3 siroheme synthase compare
Atu0592 -3.3 -9.5 ABC transporter, membrane spanning protein compare
Atu3999 -3.3 -3.8 dithiobiotin synthetase compare
Atu2155 -3.2 -19.5 methionine synthase compare
Atu0723 -3.2 -2.2 FAD dependent oxidoreductase compare
Atu0591 -3.2 -13.6 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu4098 -3.1 -10.3 quinolinate synthetase compare
Atu3289 -3.0 -4.9 thiamine-phosphate pyrophosphorylase compare
Atu2569 -3.0 -13.9 thiamine biosynthesis protein compare
Atu2205 -2.9 -6.4 transcriptional regulator, MarR family compare
Atu3997 -2.9 -15.8 biotin synthetase compare
Atu3288 -2.9 -11.1 hydroxyethylthiazole kinase compare
Atu0040 -2.8 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4075 -2.8 -10.3 glycogen synthase compare
Atu0401 -2.8 -9.8 fructokinase compare
Atu3290 -2.7 -10.3 phosphomethylpyrimidine kinase compare
Atu1455 -2.5 -3.6 hypothetical protein compare
Atu1748 -2.5 -9.0 NIFU-like protein compare
Atu1462 -2.5 -13.3 glycine cleavage system protein P2 compare
Atu0185 -2.5 -4.8 methylglyoxal synthase compare
Atu0593 -2.5 -8.3 ABC transporter, membrane spanning protein compare
Atu0029 -2.4 -8.4 S-adenosylhomocysteine hydrolase compare
Atu4097 -2.4 -12.3 L-aspartate oxidase compare
Atu3998 -2.4 -14.3 8-amino-7-oxononanoate synthase compare
Atu4000 -2.4 -13.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu4001 -2.2 -6.9 3-oxoacyl-ACP synthase compare
Atu1463 -2.1 -8.6 glycine cleavage system component H compare
Atu1685 -2.1 -1.8 hypothetical protein compare
Atu2127 -2.1 -8.7 L-carnitine dehydratase compare
Atu1604 -2.1 -13.9 poly-beta-hydroxybutyrate synthase compare
Atu1464 -2.0 -6.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu0434 -1.9 -2.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0769 -1.8 -2.0 protoheme IX farnesyltransferase compare
Atu2554 -1.7 -2.6 lysyl-tRNA synthetase compare
Atu8115 -1.7 -4.3 Hypothetical Protein compare
Atu2209 -1.7 -3.9 pyrroline-5-carboxylate reductase compare
Atu0346 -1.6 -3.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0594 -1.6 -8.3 alpha-glucosidase conserved
Atu1572 -1.6 -7.6 hydrolase compare
Atu3712 -1.5 -1.4 hypothetical protein compare
Atu1457 -1.5 -1.4 hypothetical protein compare
Atu3763 -1.5 -2.1 hypothetical protein compare
Atu0354 -1.5 -2.1 ferric uptake regulator compare
Atu0319 -1.4 -1.7 ubiquinone biosynthesis protein compare
Atu1570 -1.4 -1.2 hypothetical protein compare
Atu6114 -1.3 -2.4 hypothetical protein compare
Atu2125 -1.3 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu4711 -1.3 -5.0 two component sensor kinase compare
Atu0795 -1.3 -2.9 hypothetical protein compare
Atu0421 -1.2 -1.8 ABC transporter, membrane spanning protein compare
Atu1163 -1.1 -1.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0149 -1.1 -2.3 enoyl-(acyl-carrier-protein) reductase compare
Atu0422 -1.1 -1.9 ABC transporter, membrane spanning protein compare
Atu1028 -1.1 -2.5 hypothetical protein compare
Atu2017 -1.1 -1.4 hypothetical protein compare
Atu2555 -1.1 -4.3 L-lysine 2,3-aminomutase compare
Atu5451 -1.1 -0.8 hypothetical protein compare
Atu3908 -1.1 -5.8 GntR family transcriptional regulator compare
Atu3287 -1.0 -3.2 thiamine biosynthesis associated protein compare
Atu0189 -1.0 -2.5 ABC transporter, membrane spanning protein (peptide) compare
Atu2432 -1.0 -2.7 hypothetical protein compare
Atu3183 -1.0 -1.1 hypothetical protein compare
Atu0230 -1.0 -1.9 hypothetical protein compare
Atu4616 -1.0 -1.5 dTDP-4-dehydrorhamnose reductase compare
Atu2808 -1.0 -5.8 cobyric acid synthase compare
Atu4773 -1.0 -2.0 two component response regulator compare
Atu4072 -1.0 -2.0 nodulation protein N compare
Atu5157 -1.0 -2.7 hypothetical protein compare
Atu2113 -1.0 -2.9 N-acetylmuramoyl-L-alanine amidase compare
Atu4317 -1.0 -3.2 TetR family transcriptional regulator compare
Atu2123 -1.0 -3.8 methylenetetrahydrofolate reductase compare
Atu5437 -1.0 -3.6 hypothetical protein compare
Atu2805 -0.9 -4.5 cobalamin synthesis protein compare
Atu1542 -0.9 -4.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0031 -0.9 -1.3 PTS system, IIA component compare
Atu0188 -0.9 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu2191 -0.9 -4.1 transcriptional regulator, LysR family compare
Atu2057 -0.9 -2.6 DNA helicase II compare
Atu4514 -0.9 -4.2 RpiR family transcriptional regulator compare
Atu3429 -0.9 -1.3 hypothetical protein compare
Atu1891 -0.9 -2.7 cobalamin biosynthesis protein compare
Atu2192 -0.9 -1.3 hypothetical protein compare
Atu3518 -0.9 -4.7 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu1182 -0.9 -2.1 hypothetical protein compare
Atu0601 -0.8 -5.8 oxidoreductase compare
Atu2020 -0.8 -1.9 transcriptional regulator, TetR family compare
Atu0332 -0.8 -4.0 RNA polymerase sigma-54 factor compare
Atu2640 -0.8 -2.8 hypothetical protein compare
Atu8099 -0.8 -1.6 hypothetical protein compare
Atu0977 -0.8 -2.8 serine protease DO-like protease compare
Atu2335 -0.8 -1.9 hypothetical protein compare
Atu2807 -0.8 -4.5 cob(I)alamin adenosyltransferase compare
Atu1983 -0.8 -2.9 hypothetical protein compare
Atu0190 -0.8 -4.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2802 -0.8 -4.1 precorrin-8X methylmutase compare
Atu4173 -0.8 -2.1 phosphoenolpyruvate-protein phosphotransferase compare
Atu0812 -0.8 -2.4 hypothetical protein compare
Atu1810 -0.8 -1.2 hypothetical protein compare
Atu5173 -0.7 -1.7 dehydrogenase compare
Atu1470 -0.7 -1.1 Camphor resistance protein compare
Atu4108 -0.7 -5.0 ribonuclease D compare
Atu2649 -0.7 -2.4 hypothetical protein compare
Atu5429 -0.7 -2.5 transcriptional regulator compare
Atu4166 -0.7 -1.8 UDP-glucose 4-epimerase compare
Atu1889 -0.7 -1.7 diacylglycerol kinase compare
Atu2798 -0.7 -2.2 precorrin-6y methyltransferase compare
Atu4618 -0.7 -4.4 dTDP-rhamnose-3,5-epimerase compare
Atu0300 -0.7 -3.4 methyltransferase compare
Atu3496 -0.7 -1.8 hypothetical protein compare
Atu5043 -0.7 -2.5 hypothetical protein compare
Atu1774 -0.7 -3.9 ABC transporter, substrate binding protein (peptide) compare
Atu1419 -0.7 -3.4 transcriptional regulator, GntR family compare
Atu4613 -0.7 -5.0 glycosyltransferase compare
Atu0677 -0.7 -0.6 hypothetical protein compare
Atu8054 -0.7 -0.4 hypothetical protein compare
Atu2770 -0.7 -3.1 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu1339 -0.7 -2.1 ribonuclease E compare
Atu6126 -0.6 -2.2 conjugal transfer protein, Dtr system compare
Atu2376 -0.6 -0.5 hypothetical protein compare
Atu0142 -0.6 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu2439 -0.6 -1.0 hypothetical protein compare
Atu8046 -0.6 -1.4 hypothetical protein compare
Atu8096 -0.6 -1.2 hypothetical protein compare
Atu2801 -0.6 -2.6 precorrin-2 C20 methyltransferase compare
Atu2028 -0.6 -1.7 transcriptional regulator, ArsR family compare
Atu5540 -0.6 -0.5 hypothetical protein compare
Atu1021 -0.6 -1.7 outer membrane protein compare
Atu3727 -0.6 -2.0 hypothetical protein compare
Atu1260 -0.6 -1.1 hypothetical protein compare
Atu2804 -0.6 -4.5 cobaltochelatase subunit compare
Atu1223 -0.6 -0.9 hypothetical protein compare
Atu1321 -0.6 -1.2 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Sucrose in Agrobacterium fabrum C58

For carbon source Sucrose across organisms