Experiment set2IT036 for Agrobacterium fabrum C58

Compare to:

Sucrose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4896 +2.5 7.5 acetyltransferase compare
Atu3011 +2.1 7.2 ArsR family transcriptional regulator compare
Atu3001 +2.0 5.6 hypothetical protein compare
Atu4897 +1.8 4.9 hypothetical protein compare
Atu3006 +1.7 7.9 hypothetical protein compare
Atu4893 +1.6 7.2 hypothetical protein compare
Atu3013 +1.6 8.1 hypothetical protein compare
Atu4894 +1.6 10.7 transposase compare
Atu6138 +1.6 7.0 Repressor of the acc and arc operons compare
Atu3009 +1.6 1.7 exopolysaccharide production protein compare
Atu3016 +1.5 9.0 phosphoglyceromutase compare
Atu4892 +1.4 11.0 hypothetical protein compare
Atu3018 +1.4 5.9 hypothetical protein compare
Atu3017 +1.4 2.5 phosphoglyceromutase compare
Atu4888 +1.3 7.1 hypothetical protein compare
Atu3010 +1.3 9.3 hypothetical protein compare
Atu4864 +1.3 7.9 MarR family transcriptional regulator compare
Atu5164 +1.3 1.7 type IV secretion protein AvhB3 compare
Atu3026 +1.3 8.6 short chain dehydrogenase compare
Atu3023 +1.2 8.3 sugar ABC transporter permease compare
Atu4890 +1.2 3.2 IS426 transposase compare
Atu3015 +1.2 8.2 hypothetical protein compare
Atu3014 +1.2 3.4 hypothetical protein compare
Atu4875 +1.2 6.7 hypothetical protein compare
Atu4880 +1.2 9.5 AraC family transcriptional regulator compare
Atu3022 +1.2 8.2 sugar ABC transporter permease compare
Atu4878 +1.2 5.6 hypothetical protein compare
Atu3008 +1.2 2.1 hypothetical protein compare
Atu3019 +1.2 8.0 hypothetical protein compare
Atu4879 +1.1 5.9 hypothetical protein compare
Atu4889 +1.1 7.1 hypothetical protein compare
Atu8093 +1.1 6.1 hypothetical protein compare
Atu3021 +1.1 7.3 sugar ABC transporter ATPase compare
Atu3024 +1.1 8.8 sugar ABC transporter permease compare
Atu4872 +1.1 7.0 LysR family transcriptional regulator compare
Atu6131 +1.1 5.5 TraR Antiactivator compare
Atu5430 +1.1 1.2 hypothetical protein compare
Atu4887 +1.1 5.4 hypothetical protein compare
Atu4877 +1.0 7.0 short-chain dehydrogenase compare
Atu3025 +1.0 8.5 oligo alginate lyase compare
Atu4866 +1.0 4.9 hypothetical protein compare
Atu2067 +1.0 1.5 hypothetical protein compare
Atu3027 +1.0 7.1 dehydrogenase compare
Atu4870 +1.0 7.6 NADP-dependent quinone oxidoreductase compare
Atu3020 +1.0 5.4 GntR family transcriptional regulator compare
Atu4881 +1.0 5.6 hypothetical protein compare
Atu8202 +1.0 3.6 hypothetical protein compare
Atu4884 +0.9 4.1 hypothetical protein compare
Atu4876 +0.9 7.2 oxidoreductase compare
Atu4882 +0.9 3.4 hypothetical protein compare
Atu4874 +0.9 7.4 hypothetical protein compare
Atu3032 +0.9 4.1 hypothetical protein compare
Atu5475 +0.9 2.9 hypothetical protein compare
Atu3028 +0.9 5.5 hypothetical protein compare
Atu3029 +0.8 5.9 glucarate dehydratase compare
Atu4391 +0.8 1.8 nitric oxide reductase NorE protein compare
Atu3033 +0.8 4.1 hypothetical protein compare
Atu4873 +0.8 5.1 TetR family transcriptional regulator compare
Atu4865 +0.8 5.2 oxidoreductase compare
Atu4868 +0.8 5.8 oxidoreductase compare
Atu4869 +0.8 3.8 hypothetical protein compare
Atu5485 +0.7 1.1 hypothetical protein compare
Atu3035 +0.7 6.3 two component response regulator compare
Atu4867 +0.7 4.8 hypothetical protein compare
Atu1327 +0.7 2.7 NADH-ubiquinone oxidoreductase compare
Atu3037 +0.7 4.6 dipeptide ABC transporter permease compare
Atu5115 +0.7 1.5 hypothetical protein compare
Atu4677 +0.7 1.7 hypothetical protein compare
Atu2249 +0.7 1.3 hypothetical protein compare
Atu0809 +0.7 1.0 hypothetical protein compare
Atu4862 +0.7 5.3 IS21 family transposase compare
Atu4860 +0.7 4.2 hypothetical protein compare
Atu3295 +0.6 3.3 hypothetical protein compare
Atu0751 +0.6 2.6 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu0966 +0.6 2.3 hypothetical protein compare
Atu0580 +0.6 2.9 flagellar biosynthetic protein compare
Atu0470 +0.6 1.8 hypothetical protein compare
Atu0904 +0.6 2.1 hypothetical protein compare
Atu0941 +0.6 0.7 hypothetical protein compare
Atu3031 +0.6 1.2 hypothetical protein compare
Atu3030 +0.6 2.7 hypothetical protein compare
Atu0573 +0.6 3.4 transcriptional regulator compare
Atu5146 +0.6 1.1 hypothetical protein compare
Atu3043 +0.6 4.8 hydantoinase beta subunit-like protein compare
Atu0340 +0.6 1.9 SAM dependent methyltransferase compare
Atu0791 +0.6 3.7 transcriptional regulator, GntR family compare
Atu8158 +0.6 1.2 hypothetical protein compare
Atu5010 +0.6 1.4 hypothetical protein compare
Atu1190 +0.6 3.1 hypothetical protein compare
Atu3045 +0.5 3.7 hypothetical protein compare
Atu3036 +0.5 3.1 dipeptide ABC transporter permease compare
Atu3038 +0.5 3.6 dipeptide ABC transporter ATPase compare
Atu4861 +0.5 3.6 IS21 family transposase compare
Atu1838 +0.5 3.2 ABC transporter, substrate binding protein (amino acid) compare
Atu3497 +0.5 1.0 hypothetical protein compare
Atu3041 +0.5 4.4 dipeptide ABC transporter substrate-binding protein compare
Atu1857 +0.5 2.7 inositol monophosphatase family protein compare
Atu1724 +0.5 1.7 hypothetical protein compare
Atu3461 +0.5 1.4 GntR family transcriptional regulator compare
Atu4859 +0.5 3.7 hypothetical protein compare
Atu0523 +0.5 3.8 flagellar M-ring protein compare
Atu3042 +0.5 2.4 hypothetical protein compare
Atu3040 +0.5 3.5 hypothetical protein compare
Atu3603 +0.5 2.0 two component response regulator compare
Atu0450 +0.5 3.4 transcription antitermination protein compare
Atu0477 +0.5 1.1 hypothetical protein compare
Atu0564 +0.5 3.9 flagellar biosynthetic protein compare
Atu3057 +0.5 3.7 hypothetical protein compare
Atu3317 +0.5 1.5 hypothetical protein compare
Atu2584 +0.5 2.6 hypothetical protein compare
Atu3757 +0.5 1.8 hypothetical protein compare
Atu3337 +0.5 3.6 LacI family transcriptional regulator compare
Atu0119 +0.5 0.9 hypothetical protein compare
Atu8032 +0.5 1.9 hypothetical protein compare
Atu3044 +0.5 1.8 asparaginase compare
Atu0576 +0.5 3.4 flagellar hook-associated protein compare
Atu1871 +0.5 2.2 glutathione S-transferase compare
Atu4858 +0.5 4.3 virulence virD4-like protein compare
Atu3034 +0.5 2.6 ROK family transcriptional regulator compare
Atu0554 +0.5 2.7 flagellar basal-body rod protein compare
Atu3039 +0.5 3.7 hydantoinase beta subunit-like protein compare
Atu8132 +0.5 3.1 hypothetical protein compare
Atu0558 +0.5 3.1 flagellar basal body rod protein compare
Atu0886 +0.5 1.0 hypothetical protein compare
Atu4144 +0.5 0.8 hypothetical protein compare
Atu0546 +0.5 2.7 flagellar biosynthetic protein compare
Atu4857 +0.5 2.4 mobilization protein C compare
Atu1500 +0.5 1.4 rare lipoprotein A compare
Atu6173 +0.5 2.2 component of type IV secretion system compare
Atu1993 +0.5 3.0 tRNA/rRNA metyltransferase compare
Atu5489 +0.5 0.8 hypothetical protein compare
Atu3619 +0.4 1.5 hypothetical protein compare
Atu1968 +0.4 1.1 hypothetical protein compare
Atu1232 +0.4 1.3 hypothetical protein compare
Atu0581 +0.4 3.5 flagellar biosynthesis protein compare
Atu3046 +0.4 3.4 oxidoreductase compare
Atu0548 +0.4 3.2 flagellar L-ring protein precursor compare
Atu3631 +0.4 2.9 hypothetical protein compare
Atu8057 +0.4 1.9 hypothetical protein compare
Atu0344 +0.4 2.0 hypothetical protein compare
Atu2633 +0.4 1.2 RhtB family transporter compare
Atu5145 +0.4 1.4 acetyltransferase compare
Atu3056 +0.4 3.4 beta 1,3 glucan synthase catalytic subunit compare
Atu0582 +0.4 3.0 flagellar biosynthetic protein FLIR compare
Atu3050 +0.4 3.2 AgaE protein compare
Atu0948 +0.4 1.7 hypothetical protein compare
Atu0563 +0.4 3.3 flagellar motor switch protein FliG compare
Atu4486 +0.4 2.1 nitroreductase compare
Atu0566 +0.4 1.1 hypothetical protein compare
Atu0681 +0.4 1.6 hypothetical protein compare
Atu6098 +0.4 0.4 transcriptional regulator, HTH family compare
Atu0070 +0.4 3.2 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu1529 +0.4 2.0 nitrogen fixation protein FixH compare
Atu0947 +0.4 1.4 transcriptional regulator, AsnC family compare
Atu0935 +0.4 2.1 hypothetical protein compare
Atu0574 +0.4 3.1 flagellar hook protein compare
Atu0560 +0.4 2.7 flagellar motor protein compare
Atu1683 +0.4 1.0 hypothetical protein compare
Atu0557 +0.4 3.0 flagellum-specific ATP synthase compare
Atu0571 +0.4 3.1 chemotaxis MotD protein compare
Atu1449 +0.4 2.6 potassium uptake protein compare
Atu8087 +0.4 0.5 putative peptidoglycan binding protein compare
Atu3516 +0.4 2.0 MutT family NTP pyrophosphatase compare
Atu1535 +0.4 1.4 cytochrome c oxidase, FixQ chain compare
Atu8022 +0.4 1.6 hypothetical protein compare
Atu1366 +0.4 1.5 hypothetical protein compare
Atu1185 +0.4 1.7 hypothetical protein compare
Atu1905 +0.4 2.6 short chain dehydrogenase compare
Atu3047 +0.4 2.7 oligopeptide ABC transporter permease compare
Atu5517 +0.4 1.3 hypothetical protein compare
Atu0755 +0.4 1.2 hypothetical protein compare
Atu1967 +0.4 2.3 hypothetical protein compare
Atu3443 +0.4 1.3 hypothetical protein compare
Atu3052 +0.4 2.0 MarR family transcriptional regulator compare
Atu3299 +0.4 0.8 hypothetical protein compare
Atu2585 +0.4 1.6 hypothetical protein compare
Atu0943 +0.4 0.7 hypothetical protein compare
Atu4237 +0.4 1.5 hypothetical protein compare
Atu1230 +0.4 1.9 hypothetical protein compare
Atu1325 +0.4 1.6 acetyltransferase compare
Atu0550 +0.4 3.0 flagellar P-ring protein precursor compare
Atu0797 +0.4 2.0 hydrolase compare
Atu6104 +0.4 1.6 conserved hypothetical protein compare
Atu3218 +0.4 1.5 hypothetical protein compare
Atu0696 +0.4 2.1 phosphatase compare
Atu2676 +0.4 1.4 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu4846 +0.4 2.9 hypothetical protein compare
Atu1722 +0.4 1.7 hypothetical protein compare
Atu3493 +0.4 1.6 non-heme haloperoxidase compare
Atu3569 +0.4 1.2 hypothetical protein compare
Atu0999 +0.4 2.3 magnesium transport protein compare
Atu3778 +0.4 2.0 UTP-glucose-1-phosphate uridylyltransferase compare
Atu2574 +0.4 1.4 hypothetical protein compare
Atu4843 +0.4 2.8 sugar ABC transporter ATPase compare
Atu5114 +0.4 1.2 hypothetical protein compare
Atu6030 +0.4 1.3 ORF13 hypothetical protein compare
Atu4589 +0.4 1.8 transmembrane transport protein compare
Atu8033 +0.4 2.0 hypothetical protein compare
Atu5511 +0.3 1.6 hypothetical protein compare
Atu4607 +0.3 2.3 sugar acetylase compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Sucrose in Agrobacterium fabrum C58

For carbon source Sucrose across organisms