Experiment set2IT033 for Escherichia coli BW25113
LB with Doxycycline hyclate 0.001 mg/ml
Group: stressMedia: LB + Doxycycline hyclate (0.001 mg/ml)
Culturing: Keio_ML9, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=orbital
By: Kelly on 6/24/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 965 E5,E6
Specific Phenotypes
For 8 genes in this experiment
For stress Doxycycline hyclate in Escherichia coli BW25113
For stress Doxycycline hyclate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes | 2 |
| LOS core oligosaccharide biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| di-trans,poly-cis-undecaprenyl phosphate biosynthesis | 2 | 2 | 1 |
| polyisoprenoid biosynthesis (E. coli) | 5 | 5 | 1 |
| lipid A-core biosynthesis (E. coli K-12) | 10 | 9 | 1 |
| lipid A-core biosynthesis (Salmonella) | 10 | 8 | 1 |
| peptidoglycan recycling II | 10 | 7 | 1 |
| peptidoglycan recycling I | 14 | 14 | 1 |
| superpathway of Kdo2-lipid A biosynthesis | 25 | 24 | 1 |