Experiment set2IT026 for Agrobacterium fabrum C58

Compare to:

Cellopentaose carbon source

200 most important genes:

  gene name fitness t score description  
Atu0679 -7.1 -4.9 ATP phosphoribosyltransferase compare
Atu0432 -6.7 -10.2 O-succinylhomoserine sulfhydrylase compare
Atu1140 -6.7 -7.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0537 -6.2 -6.1 histidinol dehydrogenase compare
Atu2726 -6.2 -24.8 pyruvate carboxylase compare
Atu1845 -6.1 -7.3 phosphoribosylformylglycinamidine synthase I compare
Atu1308 -6.1 -8.3 aspartate carbamoyl transferase catalytic subunit compare
Atu3706 -5.9 -10.7 D-3-phosphoglycerate dehydrogenase compare
Atu1588 -5.9 -11.4 homoserine dehydrogenase compare
Atu2791 -5.9 -10.5 3-isopropylmalate dehydrogenase compare
Atu2709 -5.8 -22.6 3-isopropylmalate dehydratase, large subunit compare
Atu1687 -5.7 -12.2 anthranilate phosphoribosyltransferase compare
Atu3784 -5.7 -29.9 glutamate synthase large subunit compare
Atu1688 -5.6 -7.7 indole-3-glycerol-phosphate synthase compare
Atu2289 -5.6 -21.2 anthranilate synthase component I and II compare
Atu1205 -5.5 -16.3 threonine dehydratase compare
Atu0099 -5.4 -10.2 prephenate dehydratase compare
Atu2264 -5.4 -15.9 2-isopropylmalate synthase compare
Atu2650 -5.3 -16.4 glycerol-3-phosphate dehydrogenase compare
Atu1750 -5.3 -4.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu0041 -5.1 -3.5 glutamine amidotransferase compare
Atu2036 -5.1 -19.0 acetolactate synthase III, large subunit compare
Atu2040 -5.1 -7.0 phosphoserine phosphatase compare
Atu1844 -5.0 -5.3 Phosphoribosylformylglycinamidine synthetase compare
Atu0678 -5.0 -7.6 histidyl-tRNA synthetase compare
Atu3783 -5.0 -14.5 glutamate synthase subunit beta compare
Atu3707 -4.8 -5.7 phosphoserine aminotransferase compare
Atu0399 -4.7 -8.4 dihydroorotase compare
Atu1307 -4.7 -6.5 dihydroorotase compare
Atu0400 -4.6 -7.1 orotate phosphoribosyltransferase compare
Atu1141 -4.6 -9.2 Phosphoribosylglycinamide synthetase compare
Atu0486 -4.6 -8.5 dihydroorotate dehydrogenase compare
Atu2718 -4.5 -11.6 homoserine O-succinyltransferase compare
Atu3739 -4.4 -4.6 phosphoglycerate kinase compare
Atu0184 -4.4 -5.2 glucokinase compare
Atu2790 -4.2 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu0017 -4.2 -5.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0038 -4.2 -5.6 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1075 -4.1 -7.0 amidophosphoribosyltransferase compare
Atu1850 -4.1 -7.2 phosphoribosylformylglycinamidine synthetase II compare
Atu0298 -4.0 -10.8 orotidine 5 compare
Atu3754 -4.0 -7.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1030 -3.9 -3.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3885 -3.9 -10.7 inositol monophosphatase compare
Atu0039 -3.7 -3.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0043 -3.5 -4.2 imidazoleglycerol-phosphate dehydratase compare
Atu2747 -3.5 -15.4 hypothetical protein compare
Atu3469 -3.5 -4.1 phosphoglyceromutase compare
Atu3755 -3.4 -6.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4075 -3.3 -12.5 glycogen synthase compare
Atu0185 -3.3 -6.3 methylglyoxal synthase compare
Atu2015 -3.3 -18.1 aminotransferase compare
Atu0647 -3.3 -9.2 phosphoribosylamine--glycine ligase compare
Atu3483 -3.2 -9.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1686 -3.2 -17.4 peptidyl-prolyl cis-trans isomerse D compare
Atu0040 -3.1 -1.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0792 -3.0 -9.5 hypothetical protein compare
Atu1359 -2.9 -2.1 dnaK deletion suppressor protein compare
Atu3482 -2.9 -9.3 pantoate--beta-alanine ligase compare
Atu2548 -2.9 -17.3 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0030 -2.6 -2.8 phosphocarrier protein HPr compare
Atu1589 -2.5 -8.6 aminotransferase, class I compare
Atu3731 -2.3 -9.1 5-formyltetrahydrofolate cyclo-ligase compare
Atu0641 -2.3 -5.8 hypothetical protein compare
Atu0598 -2.2 -9.2 phosphogluconate dehydratase compare
Atu2155 -2.1 -15.5 methionine synthase compare
Atu1446 -2.0 -2.4 two component response regulator compare
Atu1456 -2.0 -10.0 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2209 -1.9 -6.1 pyrroline-5-carboxylate reductase compare
Atu4098 -1.8 -9.9 quinolinate synthetase compare
Atu3999 -1.8 -3.4 dithiobiotin synthetase compare
Atu4096 -1.8 -9.8 nicotinate-nucleotide pyrophosphorylase compare
Atu0769 -1.8 -2.2 protoheme IX farnesyltransferase compare
Atu4097 -1.7 -9.3 L-aspartate oxidase compare
Atu1463 -1.7 -6.4 glycine cleavage system component H compare
Atu2127 -1.7 -8.6 L-carnitine dehydratase compare
Atu1219 -1.7 -1.6 hypothetical protein compare
Atu1462 -1.7 -11.3 glycine cleavage system protein P2 compare
Atu2821 -1.7 -7.5 transcriptional regulator, GntR family compare
Atu1464 -1.7 -6.2 glycine cleavage system T protein, aminomethyltransferase compare
Atu0029 -1.7 -7.1 S-adenosylhomocysteine hydrolase compare
Atu3998 -1.7 -11.9 8-amino-7-oxononanoate synthase compare
Atu4000 -1.6 -11.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu4001 -1.6 -9.4 3-oxoacyl-ACP synthase compare
Atu3997 -1.6 -10.8 biotin synthetase compare
Atu4371 -1.6 -7.3 sugar ABC transporter permease compare
Atu8115 -1.6 -5.3 Hypothetical Protein compare
Atu4372 -1.6 -8.4 ribose ABC transporter permease compare
Atu4369 -1.5 -7.2 sugar ABC transporter substrate-binding protein compare
Atu0434 -1.5 -3.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1604 -1.5 -11.5 poly-beta-hydroxybutyrate synthase compare
Atu1454 -1.5 -6.2 siroheme synthase compare
Atu4370 -1.5 -8.3 sugar ABC transporter ATPase compare
Atu0601 -1.5 -8.0 oxidoreductase compare
Atu1748 -1.4 -8.9 NIFU-like protein compare
Atu3908 -1.4 -7.7 GntR family transcriptional regulator compare
Atu4374 -1.4 -5.4 hypothetical protein compare
Atu0503 -1.4 -9.9 enoyl-CoA hydratase compare
Atu0723 -1.3 -1.9 FAD dependent oxidoreductase compare
Atu5451 -1.3 -1.2 hypothetical protein compare
Atu0501 -1.3 -8.6 acyl-CoA dehydrogenase compare
Atu2569 -1.3 -9.0 thiamine biosynthesis protein compare
Atu1620 -1.3 -8.1 triosephosphate isomerase compare
Atu2205 -1.3 -6.4 transcriptional regulator, MarR family compare
Atu1526 -1.3 -7.9 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu2267 -1.3 -5.5 hypothetical protein compare
Atu4375 -1.3 -7.6 hypothetical protein compare
Atu3290 -1.3 -6.3 phosphomethylpyrimidine kinase compare
Atu3288 -1.3 -6.1 hydroxyethylthiazole kinase compare
Atu1572 -1.2 -7.6 hydrolase compare
Atu2770 -1.2 -5.6 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3289 -1.2 -4.8 thiamine-phosphate pyrophosphorylase compare
Atu0405 -1.2 -9.7 long-chain-fatty-acid-CoA-ligase compare
Atu0189 -1.2 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu2808 -1.2 -5.7 cobyric acid synthase compare
Atu1455 -1.1 -4.0 hypothetical protein compare
Atu1364 -1.1 -5.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0502 -1.1 -4.9 acetyl-CoA acetyltransferase compare
Atu4173 -1.1 -2.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu3496 -1.1 -3.9 hypothetical protein compare
Atu1891 -1.1 -3.5 cobalamin biosynthesis protein compare
Atu0346 -1.1 -3.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0188 -1.1 -3.2 ABC transporter, membrane spanning protein (peptide) compare
Atu4317 -1.1 -4.1 TetR family transcriptional regulator compare
Atu0602 -1.1 -7.2 glutamine synthetase compare
Atu2376 -1.1 -0.9 hypothetical protein compare
Atu1774 -1.0 -5.5 ABC transporter, substrate binding protein (peptide) compare
Atu0876 -1.0 -1.7 superoxide dismutase compare
Atu6114 -1.0 -1.8 hypothetical protein compare
Atu2805 -1.0 -4.8 cobalamin synthesis protein compare
Atu1457 -1.0 -1.7 hypothetical protein compare
Atu1542 -1.0 -4.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2555 -1.0 -3.4 L-lysine 2,3-aminomutase compare
Atu2640 -1.0 -4.1 hypothetical protein compare
Atu0031 -1.0 -1.5 PTS system, IIA component compare
Atu2809 -1.0 -5.5 cobalamin biosynthesis protein compare
Atu2484 -1.0 -1.8 hypothetical protein compare
Atu2123 -1.0 -2.3 methylenetetrahydrofolate reductase compare
Atu2795 -0.9 -4.6 cobalamin biosynthetic protein compare
Atu0701 -0.9 -4.9 GGDEF family protein compare
Atu0190 -0.9 -4.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2801 -0.9 -3.8 precorrin-2 C20 methyltransferase compare
Atu0361 -0.9 -2.3 transcriptional regulator compare
Atu3598 -0.9 -2.2 thiol:disulfide interchange protein compare
Atu4373 -0.9 -5.6 LacI family transcriptional regulator compare
Atu0590 -0.9 -4.6 transcriptional regulator repressor compare
Atu2799 -0.9 -3.3 precorrin-6x reductase compare
Atu0837 -0.9 -3.5 transcriptional regulator, MarR family compare
Atu2207 -0.8 -2.4 two component sensor kinase compare
Atu1103 -0.8 -3.1 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1685 -0.8 -1.0 hypothetical protein compare
Atu1445 -0.8 -3.0 two component sensor kinase compare
Atu0421 -0.8 -1.4 ABC transporter, membrane spanning protein compare
Atu3343 -0.8 -4.0 trehalose utilization-like protein compare
Atu4773 -0.8 -1.5 two component response regulator compare
Atu8191 -0.8 -1.8 hypothetical protein compare
Atu3712 -0.8 -0.9 hypothetical protein compare
Atu3008 -0.8 -0.9 hypothetical protein compare
Atu3219 -0.8 -5.3 dihydroxy-acid dehydratase compare
Atu0659 -0.8 -2.4 NTP pyrophosphohydrolase, MutT family compare
Atu0690 -0.8 -2.3 hypothetical protein compare
Atu0593 -0.8 -4.0 ABC transporter, membrane spanning protein compare
Atu3342 -0.8 -3.3 trehalose utilization-like protein compare
Atu4078 -0.7 -5.8 glycogen phosphorylase compare
Atu3485 -0.7 -4.5 short chain dehydrogenase compare
Atu0332 -0.7 -5.1 RNA polymerase sigma-54 factor compare
Atu1983 -0.7 -3.7 hypothetical protein compare
Atu4477 -0.7 -3.4 TetR family transcriptional regulator compare
Atu2804 -0.7 -4.9 cobaltochelatase subunit compare
Atu1770 -0.7 -4.5 glutamine synthetase compare
Atu0981 -0.7 -4.9 glutamate-ammonia-ligase adenylyltransferase compare
Atu3727 -0.7 -1.5 hypothetical protein compare
Atu2239 -0.7 -1.5 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2803 -0.7 -2.9 Cobalamin biosynthesis associated protein compare
Atu3240 -0.7 -4.2 ROK family transcriptional regulator compare
Atu1679 -0.7 -2.2 peptidyl prolyl cis-trans isomerase compare
Atu3495 -0.7 -4.6 diguanylate cyclase compare
Atu0677 -0.7 -1.2 hypothetical protein compare
Atu0331 -0.7 -1.9 sigma-54 modulation protein compare
Atu2802 -0.6 -3.2 precorrin-8X methylmutase compare
Atu3572 -0.6 -3.9 transcriptional regulator compare
Atu2740 -0.6 -2.9 transcriptional regulator, GntR family compare
Atu6098 -0.6 -0.4 transcriptional regulator, HTH family compare
Atu3732 -0.6 -4.5 hemolysin compare
Atu6155 -0.6 -3.2 conserved hypothetical protein compare
Atu0062 -0.6 -3.4 transcriptional regulator, ROK family compare
Atu4490 -0.6 -4.5 diguanylate cyclase compare
Atu1439 -0.6 -1.5 hypothetical protein compare
Atu0533 -0.6 -1.6 putative inhibitor of septum formation compare
Atu8023 -0.6 -1.8 hypothetical protein compare
Atu0894 -0.6 -1.3 ABC transporter, membrane spanning protein compare
Atu4711 -0.6 -2.9 two component sensor kinase compare
Atu2335 -0.6 -1.6 hypothetical protein compare
Atu6112 -0.6 -2.0 conserved hypothetical protein compare
Atu3740 -0.6 -3.8 fructose bisphosphate aldolase compare
Atu2532 -0.6 -2.9 transcriptional regulator, MarR family compare
Atu0447 -0.6 -2.4 hypothetical protein compare
Atu3369 -0.6 -4.2 hypothetical protein compare
Atu1028 -0.6 -1.7 hypothetical protein compare
Atu4217 -0.6 -1.3 TetR family transcriptional regulator compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Cellopentaose in Agrobacterium fabrum C58

For carbon source Cellopentaose across organisms