Experiment set2IT023 for Escherichia coli BW25113

Compare to:

LB with Sodium Chloride 750 mM

Group: stress
Media: LB + Sodium Chloride (750 mM)
Culturing: Keio_ML9, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=orbital
By: Kelly on 6/24/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 964 F3,F4

Specific Phenotypes

For 12 genes in this experiment

For stress Sodium Chloride in Escherichia coli BW25113

For stress Sodium Chloride across organisms

SEED Subsystems

Subsystem #Specific
Colanic acid biosynthesis 7

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) 1 1 1
UDP-α-D-xylose biosynthesis 2 1 1
colanic acid (Escherichia coli K12) biosynthesis 11 10 5
heme b biosynthesis V (aerobic) 4 4 1
heme b biosynthesis I (aerobic) 4 4 1
heme b biosynthesis II (oxygen-independent) 4 4 1
superpathway of heme b biosynthesis from uroporphyrinogen-III 6 6 1
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis 6 5 1
superpathway of heme b biosynthesis from glycine 8 7 1
teichuronic acid biosynthesis (B. subtilis 168) 9 2 1
UDP-sugars interconversion 9 2 1
superpathway of heme b biosynthesis from glutamate 10 10 1
peptidoglycan recycling II 10 7 1
colanic acid building blocks biosynthesis 11 11 1
peptidoglycan recycling I 14 14 1