Experiment set2IT023 for Agrobacterium fabrum C58

Compare to:

m-Inositol carbon source

200 most important genes:

  gene name fitness t score description  
Atu1140 -8.2 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1687 -7.8 -7.6 anthranilate phosphoribosyltransferase compare
Atu1307 -7.3 -7.2 dihydroorotase compare
Atu2791 -7.3 -7.1 3-isopropylmalate dehydrogenase compare
Atu1750 -7.3 -6.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu2289 -7.3 -13.1 anthranilate synthase component I and II compare
Atu0432 -7.2 -7.0 O-succinylhomoserine sulfhydrylase compare
Atu2036 -7.2 -8.6 acetolactate synthase III, large subunit compare
Atu0400 -7.0 -4.8 orotate phosphoribosyltransferase compare
Atu1205 -7.0 -9.5 threonine dehydratase compare
Atu2264 -6.9 -10.6 2-isopropylmalate synthase compare
Atu2709 -6.8 -16.6 3-isopropylmalate dehydratase, large subunit compare
Atu2726 -6.8 -19.7 pyruvate carboxylase compare
Atu3706 -6.8 -6.6 D-3-phosphoglycerate dehydrogenase compare
Atu2650 -6.7 -12.8 glycerol-3-phosphate dehydrogenase compare
Atu3740 -6.6 -9.1 fructose bisphosphate aldolase compare
Atu0099 -6.6 -10.1 prephenate dehydratase compare
Atu3885 -6.6 -6.4 inositol monophosphatase compare
Atu1588 -6.6 -9.0 homoserine dehydrogenase compare
Atu0205 -6.5 -13.3 methylmalonate-semialdehyde dehydrogenase compare
Atu1075 -6.5 -6.4 amidophosphoribosyltransferase compare
Atu0298 -6.4 -7.7 orotidine 5 compare
Atu1308 -6.4 -7.6 aspartate carbamoyl transferase catalytic subunit compare
Atu2040 -6.3 -4.4 phosphoserine phosphatase compare
Atu0399 -6.3 -4.4 dihydroorotase compare
Atu3755 -6.3 -4.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0679 -6.2 -6.0 ATP phosphoribosyltransferase compare
Atu2747 -6.2 -10.2 hypothetical protein compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu1688 -6.1 -4.2 indole-3-glycerol-phosphate synthase compare
Atu0536 -6.0 -7.4 hypothetical protein compare
Atu2718 -6.0 -9.2 homoserine O-succinyltransferase compare
Atu0678 -6.0 -4.1 histidyl-tRNA synthetase compare
Atu0017 -6.0 -4.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3754 -6.0 -7.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2015 -5.9 -14.2 aminotransferase compare
Atu4096 -5.7 -10.6 nicotinate-nucleotide pyrophosphorylase compare
Atu0537 -5.7 -5.5 histidinol dehydrogenase compare
Atu3731 -5.7 -10.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu0486 -5.7 -7.7 dihydroorotate dehydrogenase compare
Atu4098 -5.7 -14.4 quinolinate synthetase compare
Atu0207 -5.6 -17.6 transcriptional regulator, LysR family conserved
Atu1141 -5.5 -6.6 Phosphoribosylglycinamide synthetase compare
Atu3739 -5.4 -2.9 phosphoglycerate kinase compare
Atu4505 -5.4 -12.1 LacI family transcriptional regulator compare
Atu3783 -5.4 -17.9 glutamate synthase subunit beta compare
Atu1844 -5.3 -4.6 Phosphoribosylformylglycinamidine synthetase compare
Atu2790 -5.2 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu0043 -5.1 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu0647 -5.1 -6.1 phosphoribosylamine--glycine ligase compare
Atu1620 -5.1 -14.0 triosephosphate isomerase compare
Atu1686 -5.1 -20.2 peptidyl-prolyl cis-trans isomerse D compare
Atu0038 -5.1 -6.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0803 -5.1 -19.6 pyruvate,orthophosphate dikinase compare
Atu1845 -5.1 -6.7 phosphoribosylformylglycinamidine synthase I compare
Atu1589 -5.0 -10.2 aminotransferase, class I compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu0039 -4.9 -3.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu3784 -4.9 -26.1 glutamate synthase large subunit compare
Atu1850 -4.7 -4.1 phosphoribosylformylglycinamidine synthetase II compare
Atu0047 -4.7 -17.8 malate synthase G compare
Atu0876 -4.5 -3.9 superoxide dismutase compare
Atu2205 -4.5 -7.6 transcriptional regulator, MarR family compare
Atu3483 -4.4 -7.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1456 -4.4 -14.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1748 -4.4 -10.0 NIFU-like protein compare
Atu4097 -4.2 -13.5 L-aspartate oxidase compare
Atu4509 -4.2 -11.4 hypothetical protein conserved
Atu3482 -4.2 -9.5 pantoate--beta-alanine ligase compare
Atu2115 -4.1 -12.9 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2548 -4.1 -18.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1455 -4.0 -5.6 hypothetical protein compare
Atu1604 -4.0 -16.4 poly-beta-hydroxybutyrate synthase compare
Atu4510 -3.8 -14.7 hypothetical protein conserved
Atu1464 -3.8 -10.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu0030 -3.8 -2.6 phosphocarrier protein HPr compare
Atu1030 -3.6 -3.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1454 -3.6 -11.5 siroheme synthase compare
Atu3486 -3.5 -4.8 DeoR family transcriptional regulator compare
Atu4511 -3.4 -14.3 acetolactate synthase conserved
Atu1359 -3.4 -1.9 dnaK deletion suppressor protein compare
Atu1463 -3.4 -7.8 glycine cleavage system component H compare
Atu2155 -3.4 -19.3 methionine synthase compare
Atu1685 -3.4 -1.9 hypothetical protein compare
Atu1462 -3.2 -14.3 glycine cleavage system protein P2 compare
Atu0723 -3.2 -2.2 FAD dependent oxidoreductase compare
Atu3997 -3.2 -15.2 biotin synthetase compare
Atu0502 -3.2 -11.3 acetyl-CoA acetyltransferase compare
Atu4512 -3.2 -14.4 myo-inositol catabolism IolC protein conserved
Atu2020 -3.1 -8.1 transcriptional regulator, TetR family compare
Atu0062 -3.1 -8.3 transcriptional regulator, ROK family compare
Atu3289 -3.1 -6.7 thiamine-phosphate pyrophosphorylase compare
Atu0503 -3.0 -16.8 enoyl-CoA hydratase compare
Atu3732 -3.0 -7.3 hemolysin compare
Atu0040 -2.9 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0029 -2.9 -8.8 S-adenosylhomocysteine hydrolase compare
Atu2569 -2.9 -16.0 thiamine biosynthesis protein compare
Atu3290 -2.8 -10.4 phosphomethylpyrimidine kinase compare
Atu1354 -2.7 -1.2 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0641 -2.7 -5.2 hypothetical protein compare
Atu0501 -2.7 -14.7 acyl-CoA dehydrogenase compare
Atu3999 -2.7 -5.0 dithiobiotin synthetase compare
Atu3370 -2.7 -13.3 sugar ABC transporter permease conserved
Atu6114 -2.7 -3.3 hypothetical protein compare
Atu3288 -2.6 -9.9 hydroxyethylthiazole kinase compare
Atu1372 -2.6 -6.6 hypothetical protein compare
Atu0792 -2.6 -7.8 hypothetical protein compare
Atu2770 -2.6 -5.5 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3371 -2.6 -8.8 sugar ABC transporter ATPase conserved
Atu1457 -2.5 -3.9 hypothetical protein compare
Atu4000 -2.5 -15.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3372 -2.5 -13.6 sugar ABC transporter substrate-binding protein conserved
Atu4477 -2.3 -9.3 TetR family transcriptional regulator compare
Atu2554 -2.3 -2.6 lysyl-tRNA synthetase compare
Atu3998 -2.2 -10.6 8-amino-7-oxononanoate synthase compare
Atu1994 -2.2 -8.9 acyl-CoA hydrolase compare
Atu0607 -2.1 -15.1 isocitrate lyase compare
Atu0031 -2.0 -2.1 PTS system, IIA component compare
Atu2799 -2.0 -6.4 precorrin-6x reductase compare
Atu2127 -2.0 -8.5 L-carnitine dehydratase compare
Atu2800 -2.0 -3.4 precorrin-3B C17-methyltransferase compare
Atu0608 -1.9 -11.2 transcriptional regulator compare
Atu1542 -1.9 -5.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2807 -1.9 -6.3 cob(I)alamin adenosyltransferase compare
Atu8115 -1.9 -4.1 Hypothetical Protein compare
Atu2494 -1.9 -10.0 NAD(P)+ transhydrogenase beta chain compare
Atu2809 -1.8 -8.0 cobalamin biosynthesis protein compare
Atu2493 -1.8 -11.7 NAD(P)+ transhydrogenase compare
Atu0606 -1.8 -3.9 hypothetical protein compare
Atu6098 -1.7 -1.0 transcriptional regulator, HTH family compare
Atu0422 -1.7 -2.7 ABC transporter, membrane spanning protein compare
Atu4001 -1.7 -7.2 3-oxoacyl-ACP synthase compare
Atu0405 -1.7 -11.7 long-chain-fatty-acid-CoA-ligase compare
Atu6165 -1.7 -1.3 hypothetical protein compare
Atu0837 -1.7 -5.7 transcriptional regulator, MarR family compare
Atu3763 -1.7 -2.0 hypothetical protein compare
Atu2801 -1.7 -5.7 precorrin-2 C20 methyltransferase compare
Atu0346 -1.6 -2.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1729 -1.6 -6.0 putative molybdenum cofactor biosynthesis protein compare
Atu1572 -1.6 -8.6 hydrolase compare
Atu3469 -1.6 -3.5 phosphoglyceromutase compare
Atu2808 -1.6 -7.3 cobyric acid synthase compare
Atu1446 -1.6 -3.0 two component response regulator compare
Atu2796 -1.5 -5.4 precorrin-4 C11-methyltransferase compare
Atu1891 -1.5 -4.6 cobalamin biosynthesis protein compare
Atu2802 -1.5 -6.8 precorrin-8X methylmutase compare
Atu2803 -1.5 -4.0 Cobalamin biosynthesis associated protein compare
Atu4616 -1.4 -2.2 dTDP-4-dehydrorhamnose reductase compare
Atu2805 -1.4 -5.5 cobalamin synthesis protein compare
Atu2286 -1.4 -1.8 hypothetical protein compare
Atu0636 -1.4 -7.0 hypothetical protein compare
Atu1417 -1.4 -5.2 enoyl-CoA hydratase compare
Atu3496 -1.4 -3.9 hypothetical protein compare
Atu2184 -1.4 -5.4 transcriptional regulator, AsnC family compare
Atu2795 -1.4 -5.7 cobalamin biosynthetic protein compare
Atu2793 -1.3 -4.4 cobyrinic acid a,c-diamide synthase compare
Atu2804 -1.3 -8.4 cobaltochelatase subunit compare
Atu3287 -1.3 -2.8 thiamine biosynthesis associated protein compare
Atu8088 -1.3 -2.5 hypothetical protein compare
Atu2376 -1.3 -1.1 hypothetical protein compare
Atu3727 -1.2 -3.3 hypothetical protein compare
Atu0283 -1.2 -6.3 hypothetical protein compare
Atu5430 -1.2 -1.1 hypothetical protein compare
Atu2821 -1.2 -4.1 transcriptional regulator, GntR family compare
Atu0807 -1.2 -5.8 metallo-beta-lactamase superfamily protein compare
Atu2684 -1.2 -1.8 hypothetical protein compare
Atu2207 -1.1 -2.9 two component sensor kinase compare
Atu2555 -1.1 -3.6 L-lysine 2,3-aminomutase compare
Atu0291 -1.1 -5.9 hypothetical protein compare
Atu0188 -1.1 -2.4 ABC transporter, membrane spanning protein (peptide) compare
Atu1217 -1.1 -5.1 cysteine synthase compare
Atu0331 -1.1 -1.8 sigma-54 modulation protein compare
Atu2832 -1.1 -3.1 tRNA modification GTPase compare
Atu0086 -1.1 -1.3 ribosome-binding factor A compare
Atu2797 -1.1 -2.5 cobalamin biosynthesis protein compare
Atu2746 -1.1 -3.5 hypothetical protein compare
Atu3712 -1.1 -1.9 hypothetical protein compare
Atu1570 -1.1 -1.0 hypothetical protein compare
Atu4711 -1.1 -4.8 two component sensor kinase compare
Atu2675 -1.1 -3.2 hypothetical protein compare
Atu2810 -1.0 -6.7 cobalamin biosynthetic protein compare
Atu0149 -1.0 -2.3 enoyl-(acyl-carrier-protein) reductase compare
Atu3730 -1.0 -1.6 hypothetical protein compare
Atu3485 -1.0 -5.0 short chain dehydrogenase compare
Atu2831 -1.0 -3.2 glucose inhibited division protein A compare
Atu0434 -1.0 -2.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0107 -1.0 -3.0 hypothetical protein compare
Atu2487 -0.9 -5.4 pyridoxamine kinase compare
Atu3597 -0.9 -5.4 3-hydroxybutyryl-CoA dehydrogenase compare
Atu0677 -0.9 -1.0 hypothetical protein compare
Atu0421 -0.9 -1.4 ABC transporter, membrane spanning protein compare
Atu0601 -0.9 -5.2 oxidoreductase compare
Atu0562 -0.9 -2.7 flagellar motor switch protein FliN compare
Atu1774 -0.9 -5.4 ABC transporter, substrate binding protein (peptide) compare
Atu2798 -0.9 -2.6 precorrin-6y methyltransferase compare
Atu1676 -0.9 -4.6 para-aminobenzoate synthase component I compare
Atu4108 -0.9 -5.3 ribonuclease D compare
Atu0189 -0.9 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu3219 -0.9 -6.0 dihydroxy-acid dehydratase compare
Atu2067 -0.9 -0.8 hypothetical protein compare


Specific Phenotypes

For 21 genes in this experiment

For carbon source m-Inositol in Agrobacterium fabrum C58

For carbon source m-Inositol across organisms