Experiment set2IT020 for Agrobacterium fabrum C58

Compare to:

Ribitol carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4896 +2.3 5.1 acetyltransferase compare
Atu3001 +2.2 7.4 hypothetical protein compare
Atu3011 +1.9 7.2 ArsR family transcriptional regulator compare
Atu4897 +1.8 3.7 hypothetical protein compare
Atu4894 +1.8 12.0 transposase compare
Atu3014 +1.8 5.3 hypothetical protein compare
Atu3006 +1.7 7.8 hypothetical protein compare
Atu3013 +1.7 7.3 hypothetical protein compare
Atu4893 +1.7 5.2 hypothetical protein compare
Atu3010 +1.6 10.7 hypothetical protein compare
Atu4888 +1.5 6.7 hypothetical protein compare
Atu3008 +1.5 2.7 hypothetical protein compare
Atu4892 +1.4 11.8 hypothetical protein compare
Atu3012 +1.4 3.7 hypothetical protein compare
Atu4890 +1.3 3.5 IS426 transposase compare
Atu3016 +1.3 7.9 phosphoglyceromutase compare
Atu3005 +1.3 1.6 hypothetical protein compare
Atu4889 +1.3 5.5 hypothetical protein compare
Atu3021 +1.3 8.2 sugar ABC transporter ATPase compare
Atu5430 +1.3 2.4 hypothetical protein compare
Atu3019 +1.2 9.1 hypothetical protein compare
Atu6036 +1.2 1.5 entry-exclusion protein compare
Atu8202 +1.2 6.0 hypothetical protein compare
Atu4884 +1.2 4.4 hypothetical protein compare
Atu3009 +1.2 1.3 exopolysaccharide production protein compare
Atu3015 +1.2 6.2 hypothetical protein compare
Atu4879 +1.1 5.2 hypothetical protein compare
Atu4882 +1.1 2.6 hypothetical protein compare
Atu3017 +1.1 1.9 phosphoglyceromutase compare
Atu0809 +1.1 1.9 hypothetical protein compare
Atu1566 +1.1 1.8 hypothetical protein compare
Atu6009 +1.1 4.5 indole-3-lactate synthase compare
Atu3022 +1.1 6.7 sugar ABC transporter permease compare
Atu4880 +1.0 6.9 AraC family transcriptional regulator compare
Atu4881 +1.0 5.9 hypothetical protein compare
Atu4875 +1.0 4.2 hypothetical protein compare
Atu1327 +1.0 4.4 NADH-ubiquinone oxidoreductase compare
Atu4877 +1.0 7.4 short-chain dehydrogenase compare
Atu4872 +1.0 6.4 LysR family transcriptional regulator compare
Atu3018 +1.0 4.0 hypothetical protein compare
Atu3020 +1.0 7.1 GntR family transcriptional regulator compare
Atu6131 +1.0 5.2 TraR Antiactivator compare
Atu4878 +1.0 3.3 hypothetical protein compare
Atu4608 +1.0 7.9 hypothetical protein compare
Atu8093 +0.9 5.9 hypothetical protein compare
Atu3026 +0.9 4.9 short chain dehydrogenase compare
Atu4887 +0.9 4.9 hypothetical protein compare
Atu1683 +0.9 2.8 hypothetical protein compare
Atu3025 +0.9 7.4 oligo alginate lyase compare
Atu4609 +0.9 7.2 glycosyltransferase compare
Atu3024 +0.9 6.8 sugar ABC transporter permease compare
Atu3023 +0.9 6.6 sugar ABC transporter permease compare
Atu8052 +0.9 1.5 hypothetical protein compare
Atu2585 +0.9 4.5 hypothetical protein compare
Atu3027 +0.9 6.7 dehydrogenase compare
Atu4870 +0.8 6.6 NADP-dependent quinone oxidoreductase compare
Atu4613 +0.8 6.5 glycosyltransferase compare
Atu8054 +0.8 0.7 hypothetical protein compare
Atu4876 +0.8 6.3 oxidoreductase compare
Atu4144 +0.8 1.6 hypothetical protein compare
Atu1836 +0.8 2.4 hypothetical protein compare
Atu3183 +0.8 1.3 hypothetical protein compare
Atu3028 +0.8 4.6 hypothetical protein compare
Atu4869 +0.8 3.8 hypothetical protein compare
Atu4864 +0.8 4.7 MarR family transcriptional regulator compare
Atu4610 +0.7 5.5 sugar nucleotide epimerase/dehydratase compare
Atu0580 +0.7 3.2 flagellar biosynthetic protein compare
Atu2694 +0.7 2.5 hypothetical protein compare
Atu0450 +0.7 5.5 transcription antitermination protein compare
Atu1004 +0.7 3.7 hypothetical protein compare
Atu4866 +0.7 4.0 hypothetical protein compare
Atu2183 +0.7 4.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0941 +0.7 0.9 hypothetical protein compare
Atu0922 +0.7 2.0 hypothetical protein compare
Atu0572 +0.7 2.2 hypothetical protein compare
Atu4873 +0.7 4.6 TetR family transcriptional regulator compare
Atu6138 +0.7 2.8 Repressor of the acc and arc operons compare
Atu4617 +0.7 4.0 dTDP-D-glucose-4,6-dehydratase compare
Atu0924 +0.7 2.5 hypothetical protein compare
Atu0997 +0.7 3.4 hypothetical protein compare
Atu2584 +0.7 2.8 hypothetical protein compare
Atu2577 +0.7 5.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0591 +0.7 5.1 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu4874 +0.6 4.3 hypothetical protein compare
Atu0594 +0.6 4.3 alpha-glucosidase compare
Atu4614 +0.6 3.9 glycosyltransferase compare
Atu2582 +0.6 3.2 UDP-glucose/GDP-mannose dehydrogenase compare
Atu4677 +0.6 1.4 hypothetical protein compare
Atu3033 +0.6 3.5 hypothetical protein compare
Atu8161 +0.6 0.9 hypothetical protein compare
Atu3353 +0.6 4.6 mannose-1-phosphate guanylyltransferase compare
Atu8062 +0.6 3.4 hypothetical protein compare
Atu5196 +0.6 2.0 hypothetical protein compare
Atu3864 +0.6 2.2 hypothetical protein compare
Atu4607 +0.6 3.6 sugar acetylase compare
Atu4615 +0.6 4.4 glucose-1-phosphate thymidylyltransferase compare
Atu3035 +0.6 4.8 two component response regulator compare
Atu8162 +0.6 1.4 hypothetical protein compare
Atu3029 +0.6 3.6 glucarate dehydratase compare
Atu0739 +0.6 3.2 hypothetical protein compare
Atu4606 +0.6 4.3 hypothetical protein compare
Atu1333 +0.6 2.2 outer membrane protein compare
Atu0470 +0.6 1.7 hypothetical protein compare
Atu2583 +0.5 4.2 glycosyltransferase compare
Atu5034 +0.5 1.7 hypothetical protein compare
Atu5028 +0.5 1.3 IS426 transposase compare
Atu3311 +0.5 4.6 phosphomannose isomerase compare
Atu0560 +0.5 3.5 flagellar motor protein compare
Atu0477 +0.5 0.9 hypothetical protein compare
Atu2074 +0.5 2.8 hypothetical protein compare
Atu2590 +0.5 3.2 hypothetical protein compare
Atu4095 +0.5 1.3 hypothetical protein compare
Atu4867 +0.5 3.1 hypothetical protein compare
Atu0592 +0.5 2.9 ABC transporter, membrane spanning protein compare
Atu1291 +0.5 1.7 hypothetical protein compare
Atu3037 +0.5 3.9 dipeptide ABC transporter permease compare
Atu3393 +0.5 3.1 pseudoazurin compare
Atu2740 +0.5 2.2 transcriptional regulator, GntR family compare
Atu2729 +0.5 1.6 hypothetical protein compare
Atu2824 +0.5 2.3 hypothetical protein compare
Atu0593 +0.5 3.2 ABC transporter, membrane spanning protein compare
Atu4865 +0.5 2.9 oxidoreductase compare
Atu6159 +0.5 1.6 hypothetical protein compare
Atu4446 +0.5 3.7 hypothetical protein compare
Atu8032 +0.5 1.4 hypothetical protein compare
Atu0467 +0.5 2.1 hypothetical protein compare
Atu0630 +0.5 1.7 hypothetical protein compare
Atu0791 +0.5 3.6 transcriptional regulator, GntR family compare
Atu2176 +0.5 1.6 hypothetical protein compare
Atu5540 +0.5 0.6 hypothetical protein compare
Atu0546 +0.5 2.8 flagellar biosynthetic protein compare
Atu2768 +0.5 3.3 hypothetical protein compare
Atu4618 +0.5 3.5 dTDP-rhamnose-3,5-epimerase compare
Atu4868 +0.5 3.4 oxidoreductase compare
Atu3387 +0.5 2.1 sigma factor compare
Atu5107 +0.5 1.8 hypothetical protein compare
Atu2634 +0.5 0.9 hypothetical protein compare
Atu6195 +0.5 1.6 conserved hypothetical protein compare
Atu3588 +0.5 2.2 DNA-3-methyladenine glycosidase II compare
Atu4859 +0.5 3.4 hypothetical protein compare
Atu1041 +0.5 1.9 methyltransferase compare
Atu0340 +0.5 1.0 SAM dependent methyltransferase compare
Atu0230 +0.4 1.3 hypothetical protein compare
Atu3034 +0.4 2.8 ROK family transcriptional regulator compare
Atu4641 +0.4 2.2 LysR family transcriptional regulator compare
Atu1837 +0.4 3.1 transcriptional regulator compare
Atu2201 +0.4 1.7 hydrolase compare
Atu0953 +0.4 0.7 hypothetical protein compare
Atu5497 +0.4 2.8 hypothetical protein compare
Atu5489 +0.4 1.6 hypothetical protein compare
Atu4862 +0.4 3.4 IS21 family transposase compare
Atu0070 +0.4 2.6 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0528 +0.4 2.1 large conductance mechanosensitive channel protein compare
Atu1018 +0.4 2.2 hypothetical protein compare
Atu1984 +0.4 2.1 two component sensor kinase compare
Atu0564 +0.4 2.7 flagellar biosynthetic protein compare
Atu4166 +0.4 0.7 UDP-glucose 4-epimerase compare
Atu3609 +0.4 2.5 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1040 +0.4 2.5 MFS permease compare
Atu0184 +0.4 1.6 glucokinase compare
Atu1628 +0.4 1.6 hypothetical protein compare
Atu8063 +0.4 1.3 hypothetical protein compare
Atu1225 +0.4 1.1 hypothetical protein compare
Atu4860 +0.4 2.7 hypothetical protein compare
Atu1980 +0.4 1.4 hypothetical protein compare
Atu0573 +0.4 2.9 transcriptional regulator compare
Atu1358 +0.4 2.4 hypothetical protein compare
Atu6005 +0.4 2.7 E protein compare
Atu0559 +0.4 3.1 hypothetical protein compare
Atu0558 +0.4 2.8 flagellar basal body rod protein compare
Atu0544 +0.4 1.3 hypothetical protein compare
Atu6012 +0.4 3.2 isopentenyl transferase compare
Atu0904 +0.4 2.2 hypothetical protein compare
Atu4149 +0.4 3.4 UDP-glucose 6-dehydrogenase compare
Atu3032 +0.4 1.5 hypothetical protein compare
Atu0751 +0.4 1.8 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu3655 +0.4 2.5 antioxidant protein compare
Atu4854 +0.4 1.9 hypothetical protein compare
Atu4143 +0.4 2.4 hypothetical protein compare
Atu2193 +0.4 0.6 hypothetical protein compare
Atu6007 +0.4 3.3 Mannopine synthase compare
Atu2620 +0.4 0.8 hypothetical protein compare
Atu1405 +0.4 1.8 transcriptional regulator, GntR family compare
Atu0463 +0.4 2.0 hypothetical protein compare
Atu3162 +0.4 2.6 LacI family transcriptional regulator compare
Atu2293 +0.4 1.6 hypothetical protein compare
Atu5155 +0.4 1.0 MarR family transcriptional regulator compare
Atu2030 +0.4 1.9 ECF family sigma factor compare
Atu0530 +0.4 2.5 UDP-galactose 4-epimerase compare
Atu2574 +0.4 1.5 hypothetical protein compare
Atu1834 +0.4 1.9 mutT like protein compare
Atu0015 +0.4 2.3 intracellular PHB depolymerase compare
Atu6016 +0.4 2.9 ornithine cyclodeaminase compare
Atu3603 +0.4 1.5 two component response regulator compare
Atu3912 +0.4 2.2 hypothetical protein compare
Atu8061 +0.4 2.4 hypothetical protein compare
Atu6165 +0.4 0.5 hypothetical protein compare
Atu1176 +0.4 1.8 hypothetical protein compare
Atu0568 +0.4 1.8 hypothetical protein compare
Atu0563 +0.4 2.5 flagellar motor switch protein FliG compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Ribitol in Agrobacterium fabrum C58

For carbon source Ribitol across organisms