| | gene | name | fitness | t score | description | |
|---|
| b2168 | fruK | -3.4 | -3.1 | 1-phosphofructokinase (NCBI) | compare |
| b2016 | yeeZ | -2.8 | -7.3 | predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) | compare |
| b3169 | nusA | -2.7 | -3.8 | transcription elongation factor NusA (NCBI) | compare |
| b2688 | gshA | -2.4 | -7.7 | glutamate--cysteine ligase (NCBI) | compare |
| b4172 | hfq | -2.4 | -1.6 | RNA-binding protein Hfq (NCBI) | compare |
| b0145 | dksA | -2.3 | -3.7 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3844 | fre | -2.2 | -4.6 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0080 | fruR | -2.2 | -4.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1861 | ruvA | -2.1 | -2.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2830 | nudH | -2.0 | -1.3 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0683 | fur | -1.9 | -2.0 | ferric uptake regulator (NCBI) | compare |
| b2576 | srmB | -1.8 | -3.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b0912 | ihfB | -1.8 | -3.5 | integration host factor subunit beta (NCBI) | compare |
| b3807 | cyaY | -1.8 | -6.5 | frataxin-like protein (NCBI) | compare |
| b1347 | ydaC | -1.7 | -2.8 | Rac prophage; predicted protein (NCBI) | compare |
| b0053 | surA | -1.7 | -2.8 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0737 | tolQ | -1.6 | -3.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3463 | ftsE | -1.6 | -2.4 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3741 | gidA | -1.5 | -5.3 | glucose-inhibited division protein A (NCBI) | compare |
| b1361 | ydaW | -1.5 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3121 | yhaC | -1.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b4201 | priB | -1.5 | -2.6 | primosomal replication protein N (NCBI) | compare |
| b0726 | sucA | -1.5 | -3.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0001 | thrL | -1.5 | -2.5 | thr operon leader peptide (NCBI) | compare |
| b3935 | priA | -1.4 | -2.5 | primosome assembly protein PriA (NCBI) | compare |
| b3237 | argR | -1.4 | -3.6 | arginine repressor (NCBI) | compare |
| b0888 | trxB | -1.4 | -2.8 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0784 | moaD | -1.4 | -2.5 | molybdopterin synthase, small subunit (NCBI) | compare |
| b3162 | deaD | -1.4 | -3.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3706 | trmE | -1.4 | -4.7 | tRNA modification GTPase (NCBI) | compare |
| b2953 | yggU | -1.3 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2055 | wcaE | -1.3 | -2.5 | predicted glycosyl transferase (NCBI) | compare |
| b1818 | manY | -1.3 | -2.1 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1984 | asnW | -1.3 | -1.3 | tRNA-Asn (NCBI) | compare |
| b3366 | nirD | -1.3 | -2.8 | nitrite reductase small subunit (NCBI) | compare |
| b1863 | ruvC | -1.3 | -2.9 | Holliday junction resolvase (NCBI) | compare |
| b1241 | adhE | -1.3 | -5.6 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b3725 | pstB | -1.3 | -2.0 | phosphate transporter subunit (NCBI) | compare |
| b1497 | b1497 | -1.2 | -3.3 | putative enzyme (VIMSS) | compare |
| b0097 | yacA | -1.2 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b3462 | ftsX | -1.2 | -3.8 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2390 | ypeC | -1.2 | -2.9 | hypothetical protein (NCBI) | compare |
| b3652 | recG | -1.2 | -5.7 | ATP-dependent DNA helicase (NCBI) | compare |
| b0450 | glnK | -1.2 | -2.3 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1252 | tonB | -1.2 | -2.5 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1686 | ydiI | -1.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b3961 | oxyR | -1.1 | -6.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1728 | ydjM | -1.1 | -2.5 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b2846 | yqeH | -1.1 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b4546 | ypeB | -1.1 | -1.3 | hypothetical protein (NCBI) | compare |
| b1576 | ydfD | -1.1 | -2.1 | Qin prophage; predicted protein (NCBI) | compare |
| b1058 | yceO | -1.1 | -1.1 | hypothetical protein (NCBI) | compare |
| b3442 | yhhZ | -1.1 | -2.1 | hypothetical protein (NCBI) | compare |
| b4480 | hdfR | -1.1 | -3.3 | transcriptional regulator HdfR (NCBI) | compare |
| b2424 | cysU | -1.1 | -2.0 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b3871 | bipA | -1.1 | -6.3 | GTP-binding protein (NCBI) | compare |
| b3863 | polA | -1.1 | -0.7 | DNA polymerase I (NCBI) | compare |
| b1548 | nohA | -1.1 | -1.7 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b2822 | recC | -1.1 | -2.8 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2894 | xerD | -1.1 | -1.3 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3977 | tyrU | -1.1 | -1.4 | tRNA-Tyr (NCBI) | compare |
| b3261 | fis | -1.1 | -1.4 | DNA-binding protein Fis (NCBI) | compare |
| b2479 | gcvR | -1.1 | -2.4 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2679 | proX | -1.1 | -2.6 | glycine betaine transporter subunit (NCBI) | compare |
| b1332 | ynaJ | -1.1 | -1.4 | predicted inner membrane protein (NCBI) | compare |
| b3027 | ygiZ | -1.0 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b1712 | ihfA | -1.0 | -1.8 | integration host factor subunit alpha (NCBI) | compare |
| b0890 | ftsK | -1.0 | -4.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2683 | ygaH | -1.0 | -3.5 | predicted inner membrane protein (NCBI) | compare |
| b0880 | cspD | -1.0 | -1.7 | cold shock protein homolog (NCBI) | compare |
| b1708 | nlpC | -1.0 | -3.0 | predicted lipoprotein (NCBI) | compare |
| b2937 | speB | -1.0 | -3.8 | agmatinase (NCBI) | compare |
| b3163 | nlpI | -1.0 | -2.7 | hypothetical protein (NCBI) | compare |
| b2426 | ucpA | -1.0 | -1.7 | putative oxidoreductase (VIMSS) | compare |
| b3609 | secB | -1.0 | -2.3 | export protein SecB (NCBI) | compare |
| b1628 | rsxB | -0.9 | -1.7 | electron transport complex protein RnfB (NCBI) | compare |
| b0189 | yaeO | -0.9 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b0471 | ybaB | -0.9 | -2.1 | hypothetical protein (NCBI) | compare |
| b4590 | ybfK | -0.9 | -3.4 | hypothetical protein (RefSeq) | compare |
| b2938 | speA | -0.9 | -5.4 | arginine decarboxylase (NCBI) | compare |
| b1551 | b1551 | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4402 | yjjY | -0.9 | -1.3 | hypothetical protein (NCBI) | compare |
| b3962 | udhA | -0.9 | -5.0 | putative oxidoreductase (VIMSS) | compare |
| b1324 | tpx | -0.9 | -2.2 | thiol peroxidase (NCBI) | compare |
| b1138 | ymfE | -0.9 | -1.0 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1187 | fadR | -0.9 | -2.6 | fatty acid metabolism regulator (NCBI) | compare |
| b1830 | prc | -0.9 | -3.3 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2553 | glnB | -0.9 | -2.8 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0456 | ybaA | -0.9 | -2.3 | hypothetical protein (NCBI) | compare |
| b1183 | umuD | -0.9 | -1.4 | DNA polymerase V, subunit D (NCBI) | compare |
| b0763 | modA | -0.9 | -2.5 | molybdate transporter subunit (NCBI) | compare |
| b1222 | narX | -0.9 | -2.2 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b4178 | yjeB | -0.9 | -2.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3361 | fic | -0.9 | -2.7 | stationary-phase protein, cell division (NCBI) | compare |
| b4139 | aspA | -0.9 | -4.7 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b2330 | yfcB | -0.9 | -1.2 | putative adenine-specific methylase (VIMSS) | compare |
| b3644 | yicC | -0.9 | -2.9 | hypothetical protein (NCBI) | compare |
| b4416 | rybA | -0.9 | -1.4 | unknown RNA (NCBI) | compare |
| b4208 | cycA | -0.9 | -4.3 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b3726 | pstA | -0.8 | -3.2 | phosphate transporter subunit (NCBI) | compare |
| b1524 | yneH | -0.8 | -1.0 | predicted glutaminase (NCBI) | compare |
| b2567 | rnc | -0.8 | -0.8 | ribonuclease III (NCBI) | compare |
| b3229 | sspA | -0.8 | -2.0 | stringent starvation protein A (NCBI) | compare |
| b0049 | apaH | -0.8 | -2.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b2283 | nuoG | -0.8 | -3.6 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3613 | yibP | -0.8 | -2.9 | putative membrane protein (VIMSS) | compare |
| b2343 | b2343 | -0.8 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1427 | rimL | -0.8 | -1.5 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b2699 | recA | -0.8 | -0.5 | recombinase A (NCBI) | compare |
| b1860 | ruvB | -0.8 | -1.0 | Holliday junction DNA helicase B (NCBI) | compare |
| b2743 | pcm | -0.8 | -1.8 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b1366 | ydaY | -0.8 | -2.5 | Rac prophage; predicted protein (RefSeq) | compare |
| b1085 | b1085 | -0.8 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4631 | ykgQ | -0.8 | -1.4 | no description | compare |
| b3728 | pstS | -0.8 | -2.3 | phosphate transporter subunit (NCBI) | compare |
| b0603 | ybdO | -0.8 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4529 | ydbJ | -0.8 | -0.9 | hypothetical protein (NCBI) | compare |
| b1295 | ymjA | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b4647 | mokA | -0.8 | -1.3 | no description | compare |
| b2666 | yqaE | -0.8 | -2.0 | predicted membrane protein (NCBI) | compare |
| b1936 | intG | -0.8 | -1.5 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1607 | ydgC | -0.8 | -1.4 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2939 | yqgB | -0.8 | -1.0 | predicted protein (RefSeq) | compare |
| b2279 | nuoK | -0.8 | -1.4 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2642 | yfjW | -0.8 | -1.4 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1658 | purR | -0.8 | -2.7 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b4375 | prfC | -0.8 | -3.4 | peptide chain release factor 3 (NCBI) | compare |
| b1806 | yeaY | -0.8 | -2.2 | predicted lipoprotein (NCBI) | compare |
| b1286 | rnb | -0.8 | -1.6 | exoribonuclease II (NCBI) | compare |
| b1562 | hokD | -0.8 | -1.2 | Qin prophage; small toxic polypeptide (NCBI) | compare |
| b1095 | fabF | -0.8 | -3.2 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3811 | xerC | -0.8 | -1.8 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1040 | csgD | -0.8 | -2.8 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b0036 | caiD | -0.7 | -3.6 | crotonobetainyl CoA hydratase (RefSeq) | compare |
| b1160 | elbA | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b0623 | cspE | -0.7 | -1.3 | cold shock protein E (NCBI) | compare |
| b3792 | wzxE | -0.7 | -3.9 | O-antigen translocase (NCBI) | compare |
| b0051 | ksgA | -0.7 | -2.5 | dimethyladenosine transferase (NCBI) | compare |
| b1954 | dsrA | -0.7 | -1.3 | regulatory antisense RNA (NCBI) | compare |
| b1582 | ynfA | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b1742 | b1742 | -0.7 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0957 | ompA | -0.7 | -2.2 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2277 | nuoM | -0.7 | -2.6 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0802 | ybiJ | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b0764 | modB | -0.7 | -2.2 | molybdate ABC transporter permease protein (NCBI) | compare |
| b1817 | manX | -0.7 | -2.9 | fused mannose-specific PTS enzymes: IIA component/IIB component (NCBI) | compare |
| b3390 | aroK | -0.7 | -1.1 | shikimate kinase I (NCBI) | compare |
| b1961 | dcm | -0.7 | -1.1 | DNA cytosine methylase (NCBI) | compare |
| b0357 | yaiN | -0.7 | -1.0 | putative alpha helix chain (VIMSS) | compare |
| b2517 | yfgB | -0.7 | -2.8 | predicted enzyme (NCBI) | compare |
| b1273 | yciN | -0.7 | -0.7 | hypothetical protein (NCBI) | compare |
| b1001 | yccE | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b2049 | cpsB | -0.7 | -2.1 | mannose-1-phosphate guanyltransferase (NCBI) | compare |
| b2820 | recB | -0.7 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3742 | mioC | -0.7 | -2.2 | flavodoxin (NCBI) | compare |
| b4697 | yrdF | -0.7 | -1.3 | no description | compare |
| b2278 | nuoL | -0.7 | -3.5 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4255 | yjgD | -0.7 | -1.9 | hypothetical protein (NCBI) | compare |
| b2419 | yfeK | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b1257 | yciE | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b1175 | minD | -0.7 | -2.4 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1724 | ydiZ | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| b2058 | wcaB | -0.7 | -0.9 | predicted acyl transferase (NCBI) | compare |
| b1569 | dicC | -0.7 | -1.4 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b0226 | dinJ | -0.7 | -1.6 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2286 | nuoC | -0.7 | -2.3 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b2512 | yfgL | -0.7 | -2.0 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b0949 | uup | -0.7 | -3.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3258 | panF | -0.7 | -3.8 | sodium/pantothenate symporter (VIMSS) | compare |
| b0460 | hha | -0.7 | -2.9 | modulator of gene expression, with H-NS (NCBI) | compare |
| b1729 | ydjN | -0.7 | -1.8 | predicted transporter (NCBI) | compare |
| b3205 | yhbJ | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b0615 | citF | -0.7 | -1.9 | citrate lyase, citrate-ACP transferase (alpha) subunit (NCBI) | compare |
| b2565 | recO | -0.7 | -2.4 | DNA repair protein RecO (NCBI) | compare |
| b2392 | mntH | -0.6 | -2.8 | manganese transport protein MntH (NCBI) | compare |
| b2617 | smpA | -0.6 | -1.1 | small membrane protein A (VIMSS) | compare |
| b0119 | yacL | -0.6 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1150 | ymfR | -0.6 | -0.6 | e14 prophage; predicted protein (NCBI) | compare |
| b2947 | gshB | -0.6 | -1.7 | glutathione synthetase (NCBI) | compare |
| b1959 | yedA | -0.6 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b1448 | yncA | -0.6 | -1.3 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b3257 | yhdT | -0.6 | -1.2 | conserved inner membrane protein (NCBI) | compare |
| b3764 | yifE | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b0630 | lipB | -0.6 | -0.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1739 | osmE | -0.6 | -1.1 | DNA-binding transcriptional activator (NCBI) | compare |
| b0405 | queA | -0.6 | -2.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) | compare |
| b4195 | ulaC | -0.6 | -1.5 | L-ascorbate-specific enzyme IIA component of PTS (NCBI) | compare |
| b1394 | paaG | -0.6 | -1.2 | enoyl-CoA hydratase (NCBI) | compare |
| b1289 | ycjD | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b1684 | sufA | -0.6 | -1.3 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b2977 | glcG | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b1772 | b1772 | -0.6 | -2.7 | putative kinase (VIMSS) | compare |
| b3512 | GadE | -0.6 | -2.2 | acid-responsive regulator of gadA and gadBC (Katherine Huang) | compare |
| b1253 | yciA | -0.6 | -1.3 | predicted hydrolase (NCBI) | compare |
| b2288 | nuoA | -0.6 | -1.2 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0149 | mrcB | -0.6 | -3.9 | penicillin-binding protein 1b (NCBI) | compare |
| b4614 | sokA | -0.6 | -2.0 | no description | compare |
| b1337 | abgB | -0.6 | -1.4 | predicted peptidase, aminobenzoyl-glutamate utilization protein (NCBI) | compare |
| b1078 | flgG | -0.6 | -2.6 | flagellar component of cell-distal portion of basal-body rod (NCBI) | compare |
| b1992 | cobS | -0.6 | -1.3 | cobalamin synthase (NCBI) | compare |