| | gene | name | fitness | t score | description | |
|---|
| b3792 | wzxE | -2.7 | -6.7 | O-antigen translocase (NCBI) | compare |
| b0049 | apaH | -2.6 | -5.3 | diadenosinetetraphosphatase (NCBI) | compare |
| b0683 | fur | -2.5 | -2.2 | ferric uptake regulator (NCBI) | compare |
| b2279 | nuoK | -2.3 | -2.8 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0726 | sucA | -2.1 | -3.2 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3977 | tyrU | -2.0 | -2.1 | tRNA-Tyr (NCBI) | compare |
| b0737 | tolQ | -1.9 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0500 | ybbD | -1.8 | -2.2 | hypothetical protein (RefSeq) | compare |
| b4375 | prfC | -1.8 | -4.9 | peptide chain release factor 3 (NCBI) | compare |
| b2330 | yfcB | -1.7 | -2.1 | putative adenine-specific methylase (VIMSS) | compare |
| b3725 | pstB | -1.7 | -1.6 | phosphate transporter subunit (NCBI) | compare |
| b0603 | ybdO | -1.7 | -3.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3341 | rpsG | -1.7 | -1.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b2055 | wcaE | -1.7 | -3.8 | predicted glycosyl transferase (NCBI) | compare |
| b3617 | kbl | -1.6 | -5.9 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b2281 | nuoI | -1.6 | -2.3 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0226 | dinJ | -1.6 | -2.7 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2110 | yehC | -1.6 | -3.4 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0728 | sucC | -1.5 | -4.9 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b4172 | hfq | -1.5 | -1.8 | RNA-binding protein Hfq (NCBI) | compare |
| b0118 | acnB | -1.5 | -2.3 | aconitate hydratase (NCBI) | compare |
| b3649 | rpoZ | -1.4 | -2.6 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3493 | pitA | -1.4 | -5.6 | phosphate transporter, low-affinity (NCBI) | compare |
| b0200 | gmhB | -1.4 | -1.5 | hypothetical protein (NCBI) | compare |
| b1576 | ydfD | -1.4 | -2.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1290 | sapF | -1.4 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0738 | tolR | -1.4 | -2.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1347 | ydaC | -1.3 | -2.3 | Rac prophage; predicted protein (NCBI) | compare |
| b3811 | xerC | -1.3 | -2.5 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4647 | mokA | -1.3 | -2.0 | no description | compare |
| b0724 | sdhB | -1.3 | -4.0 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3229 | sspA | -1.3 | -2.9 | stringent starvation protein A (NCBI) | compare |
| b4402 | yjjY | -1.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -1.3 | -5.0 | glucose-inhibited division protein A (NCBI) | compare |
| b1103 | ycfF | -1.3 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0630 | lipB | -1.3 | -1.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3962 | udhA | -1.3 | -6.2 | putative oxidoreductase (VIMSS) | compare |
| b4443 | gcvB | -1.2 | -1.2 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b1863 | ruvC | -1.2 | -2.6 | Holliday junction resolvase (NCBI) | compare |
| b3169 | nusA | -1.2 | -2.5 | transcription elongation factor NusA (NCBI) | compare |
| b0740 | tolB | -1.2 | -3.5 | translocation protein TolB precursor (NCBI) | compare |
| b1728 | ydjM | -1.2 | -2.5 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b1497 | b1497 | -1.2 | -3.1 | putative enzyme (VIMSS) | compare |
| b0880 | cspD | -1.1 | -1.7 | cold shock protein homolog (NCBI) | compare |
| b3257 | yhdT | -1.1 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b2276 | nuoN | -1.1 | -3.3 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3121 | yhaC | -1.1 | -1.8 | hypothetical protein (NCBI) | compare |
| b1258 | yciF | -1.1 | -2.2 | hypothetical protein (NCBI) | compare |
| b2809 | b2809 | -1.1 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1860 | ruvB | -1.1 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b2286 | nuoC | -1.1 | -3.2 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1961 | dcm | -1.0 | -1.5 | DNA cytosine methylase (NCBI) | compare |
| b3935 | priA | -1.0 | -1.8 | primosome assembly protein PriA (NCBI) | compare |
| b2278 | nuoL | -1.0 | -5.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1837 | yebW | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2287 | nuoB | -1.0 | -2.2 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1936 | intG | -1.0 | -1.8 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b4570 | lomR | -1.0 | -2.1 | no description | compare |
| b1658 | purR | -1.0 | -3.3 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b2277 | nuoM | -1.0 | -3.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3390 | aroK | -1.0 | -1.4 | shikimate kinase I (NCBI) | compare |
| b3706 | trmE | -1.0 | -4.0 | tRNA modification GTPase (NCBI) | compare |
| b3162 | deaD | -1.0 | -2.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3164 | pnp | -1.0 | -1.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1607 | ydgC | -1.0 | -1.6 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b0437 | clpP | -1.0 | -4.2 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b4146 | yjeK | -1.0 | -2.3 | predicted lysine aminomutase (NCBI) | compare |
| b4201 | priB | -1.0 | -1.9 | primosomal replication protein N (NCBI) | compare |
| b2283 | nuoG | -1.0 | -3.9 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1278 | pgpB | -1.0 | -1.5 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b2620 | smpB | -0.9 | -1.2 | SsrA-binding protein (NCBI) | compare |
| b3791 | rffA | -0.9 | -4.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2625 | yfjI | -0.9 | -3.6 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1727 | yniC | -0.9 | -2.0 | predicted hydrolase (NCBI) | compare |
| b4548 | ypjJ | -0.9 | -1.9 | hypothetical protein (NCBI) | compare |
| b0739 | tolA | -0.9 | -2.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2953 | yggU | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3616 | tdh | -0.9 | -2.8 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1332 | ynaJ | -0.9 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b0303 | ykgI | -0.9 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b0890 | ftsK | -0.9 | -3.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0113 | pdhR | -0.9 | -2.6 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b0051 | ksgA | -0.9 | -2.7 | dimethyladenosine transferase (NCBI) | compare |
| b2280 | nuoJ | -0.9 | -2.6 | NADH dehydrogenase subunit J (NCBI) | compare |
| b0849 | grxA | -0.9 | -1.6 | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) (NCBI) | compare |
| b4063 | soxR | -0.9 | -2.7 | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) | compare |
| b0792 | ybhR | -0.9 | -2.6 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4578 | insP | -0.9 | -1.3 | no description | compare |
| b1827 | kdgR | -0.9 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0723 | sdhA | -0.9 | -4.3 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b1257 | yciE | -0.9 | -1.9 | hypothetical protein (NCBI) | compare |
| b2642 | yfjW | -0.9 | -1.2 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3728 | pstS | -0.9 | -2.6 | phosphate transporter subunit (NCBI) | compare |
| b1252 | tonB | -0.9 | -1.8 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b4416 | rybA | -0.8 | -1.4 | unknown RNA (NCBI) | compare |
| b2259 | pmrD | -0.8 | -1.0 | polymyxin resistance protein B (VIMSS) | compare |
| b1167 | ymgC | -0.8 | -1.1 | hypothetical protein (NCBI) | compare |
| b4177 | purA | -0.8 | -1.8 | adenylosuccinate synthetase (NCBI) | compare |
| b4493 | gapC | -0.8 | -1.4 | no description | compare |
| b0237 | pepD | -0.8 | -3.7 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b3082 | ygjM | -0.8 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3609 | secB | -0.8 | -2.5 | export protein SecB (NCBI) | compare |
| b4631 | ykgQ | -0.8 | -1.4 | no description | compare |
| b3398 | yrfF | -0.8 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b1040 | csgD | -0.8 | -2.8 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b4294 | insA-7 | -0.8 | -1.3 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b4590 | ybfK | -0.8 | -2.8 | hypothetical protein (RefSeq) | compare |
| b1861 | ruvA | -0.8 | -1.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0430 | cyoC | -0.8 | -2.1 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b1526 | yneJ | -0.8 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4163 | glyV | -0.8 | -0.9 | tRNA-Gly (NCBI) | compare |
| b3086 | ygjQ | -0.8 | -2.5 | predicted thioredoxin-like (NCBI) | compare |
| b3443 | yrhA | -0.8 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0957 | ompA | -0.8 | -2.2 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2168 | fruK | -0.8 | -1.3 | 1-phosphofructokinase (NCBI) | compare |
| b1213 | ychQ | -0.7 | -1.9 | predicted transcriptional regulator (NCBI) | compare |
| b0641 | rlpB | -0.7 | -1.4 | minor lipoprotein (NCBI) | compare |
| b3844 | fre | -0.7 | -2.5 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3871 | bipA | -0.7 | -4.5 | GTP-binding protein (NCBI) | compare |
| b1540 | ydfH | -0.7 | -0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1263 | trpD | -0.7 | -1.3 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b4179 | vacB | -0.7 | -3.3 | putative enzyme (VIMSS) | compare |
| b4503 | yafF | -0.7 | -1.2 | no description | compare |
| b1235 | rssB | -0.7 | -3.2 | response regulator of RpoS (NCBI) | compare |
| b1685 | ydiH | -0.7 | -1.1 | predicted protein (RefSeq) | compare |
| b0560 | nohB | -0.7 | -1.3 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b0088 | murD | -0.7 | -1.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1742 | b1742 | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0431 | cyoB | -0.7 | -3.8 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b2790 | yqcA | -0.7 | -1.9 | flavodoxin (NCBI) | compare |
| b1589 | ynfG | -0.7 | -1.7 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b2352 | yfdI | -0.7 | -1.8 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b0872 | hcr | -0.7 | -1.0 | HCP oxidoreductase, NADH-dependent (NCBI) | compare |
| b1920 | fliY | -0.7 | -1.0 | cystine transporter subunit (NCBI) | compare |
| b3094 | exuR | -0.7 | -2.4 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b4595 | yciY | -0.7 | -0.9 | hypothetical protein (RefSeq) | compare |
| b0092 | ddlB | -0.7 | -2.1 | D-alanylalanine synthetase (NCBI) | compare |
| b1409 | ynbB | -0.7 | -2.8 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b2049 | cpsB | -0.7 | -1.8 | mannose-1-phosphate guanyltransferase (NCBI) | compare |
| b4178 | yjeB | -0.7 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3426 | glpD | -0.7 | -2.8 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1644 | b1644 | -0.7 | -1.6 | putative membrane protein (VIMSS) | compare |
| b1765 | ydjA | -0.7 | -0.6 | predicted oxidoreductase (NCBI) | compare |
| b3866 | yihI | -0.7 | -2.6 | hypothetical protein (NCBI) | compare |
| b0428 | cyoE | -0.7 | -2.7 | protoheme IX farnesyltransferase (NCBI) | compare |
| b4651 | yibW | -0.7 | -1.0 | no description | compare |
| b1551 | b1551 | -0.7 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0232 | yafN | -0.7 | -0.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2991 | hybF | -0.7 | -2.2 | protein involved with the maturation of hydrogenases 1 and 2 (NCBI) | compare |
| b2576 | srmB | -0.7 | -1.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b0014 | dnaK | -0.7 | -0.7 | molecular chaperone DnaK (NCBI) | compare |
| b2846 | yqeH | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4571 | wbbL | -0.6 | -1.7 | no description | compare |
| b3650 | spoT | -0.6 | -2.8 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b2531 | iscR | -0.6 | -0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3237 | argR | -0.6 | -1.9 | arginine repressor (NCBI) | compare |
| b4100 | phnH | -0.6 | -1.6 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b1612 | fumA | -0.6 | -1.7 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b0080 | fruR | -0.6 | -2.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2782 | chpA | -0.6 | -1.8 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b3033 | yqiB | -0.6 | -2.1 | predicted dehydrogenase (NCBI) | compare |
| b1944 | fliL | -0.6 | -1.9 | flagellar basal body-associated protein FliL (NCBI) | compare |
| b4139 | aspA | -0.6 | -3.4 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b0438 | clpX | -0.6 | -2.8 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1738 | chbB | -0.6 | -2.4 | N,N'-diacetylchitobiose-specific enzyme IIB component of PTS (NCBI) | compare |
| b4128 | yjdK | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b1346 | ydaQ | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1153 | ymfQ | -0.6 | -2.0 | e14 prophage; conserved protein (NCBI) | compare |
| b2567 | rnc | -0.6 | -0.7 | ribonuclease III (NCBI) | compare |
| b2565 | recO | -0.6 | -2.3 | DNA repair protein RecO (NCBI) | compare |
| b1084 | rne | -0.6 | -1.9 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1126 | potA | -0.6 | -2.5 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b2553 | glnB | -0.6 | -2.0 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3438 | gntR | -0.6 | -2.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0365 | tauA | -0.6 | -2.0 | taurine transport system periplasmic protein (VIMSS) | compare |
| b3836 | b3836 | -0.6 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0218 | yafU | -0.6 | -1.8 | predicted inner membrane protein (RefSeq) | compare |
| b3131 | agaR | -0.6 | -1.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2318 | truA | -0.6 | -1.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3029 | ygiN | -0.6 | -1.0 | quinol monooxygenase (NCBI) | compare |
| b4462 | ygaQ | -0.6 | -3.0 | hypothetical protein (RefSeq) | compare |
| b2699 | recA | -0.6 | -0.6 | recombinase A (NCBI) | compare |
| b1380 | ldhA | -0.6 | -1.0 | D-lactate dehydrogenase (NCBI) | compare |
| b0436 | tig | -0.6 | -2.9 | trigger factor (NCBI) | compare |
| b3806 | cyaA | -0.6 | -2.0 | adenylate cyclase (NCBI) | compare |
| b2966 | yqgA | -0.6 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b1379 | hslJ | -0.6 | -1.6 | heat-inducible protein (NCBI) | compare |
| b1423 | ydcJ | -0.6 | -1.5 | hypothetical protein (NCBI) | compare |
| b1029 | ycdU | -0.6 | -3.3 | predicted inner membrane protein (NCBI) | compare |
| b0862 | artQ | -0.6 | -1.4 | arginine transporter subunit (NCBI) | compare |
| b2181 | yejG | -0.6 | -2.1 | hypothetical protein (NCBI) | compare |
| b4253 | yjgL | -0.6 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3723 | bglG | -0.6 | -3.8 | transcriptional antiterminator of the bgl operon (NCBI) | compare |
| b2586 | yfiM | -0.6 | -1.5 | predicted protein (RefSeq) | compare |
| b4454 | rdlD | -0.6 | -1.7 | sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR-D repeat, with toxic peptide LdrD (RefSeq) | compare |
| b1434 | ydcN | -0.6 | -0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1337 | abgB | -0.6 | -1.3 | predicted peptidase, aminobenzoyl-glutamate utilization protein (NCBI) | compare |
| b2897 | ygfY | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b1984 | asnW | -0.6 | -0.7 | tRNA-Asn (NCBI) | compare |
| b1688 | ydiK | -0.6 | -2.1 | predicted inner membrane protein (NCBI) | compare |