Experiment set2IT009 for Agrobacterium fabrum C58

Compare to:

L-Rhamnose monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
Atu2791 -7.1 -6.9 3-isopropylmalate dehydrogenase compare
Atu0099 -6.7 -10.2 prephenate dehydratase compare
Atu1844 -6.6 -4.6 Phosphoribosylformylglycinamidine synthetase compare
Atu1687 -6.6 -10.0 anthranilate phosphoribosyltransferase compare
Atu0038 -6.5 -6.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1588 -6.3 -8.7 homoserine dehydrogenase compare
Atu3706 -6.2 -7.4 D-3-phosphoglycerate dehydrogenase compare
Atu0400 -6.2 -6.0 orotate phosphoribosyltransferase compare
Atu1750 -6.0 -3.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu2289 -5.9 -17.5 anthranilate synthase component I and II compare
Atu2726 -5.8 -21.8 pyruvate carboxylase compare
Atu1140 -5.8 -6.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0432 -5.7 -9.6 O-succinylhomoserine sulfhydrylase compare
Atu3483 -5.7 -7.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1141 -5.6 -8.4 Phosphoribosylglycinamide synthetase compare
Atu2709 -5.6 -19.1 3-isopropylmalate dehydratase, large subunit compare
Atu3755 -5.6 -5.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3754 -5.5 -8.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2747 -5.5 -14.1 hypothetical protein compare
Atu0678 -5.4 -6.4 histidyl-tRNA synthetase compare
Atu0679 -5.3 -7.3 ATP phosphoribosyltransferase compare
Atu0399 -5.3 -8.1 dihydroorotase compare
Atu1205 -5.3 -14.0 threonine dehydratase compare
Atu2264 -5.2 -14.7 2-isopropylmalate synthase compare
Atu1688 -5.2 -6.2 indole-3-glycerol-phosphate synthase compare
Atu1850 -5.1 -4.3 phosphoribosylformylglycinamidine synthetase II compare
Atu2650 -5.1 -14.4 glycerol-3-phosphate dehydrogenase compare
Atu3707 -5.1 -4.9 phosphoserine aminotransferase compare
Atu0537 -5.0 -7.7 histidinol dehydrogenase compare
Atu3885 -5.0 -10.6 inositol monophosphatase compare
Atu2036 -5.0 -18.3 acetolactate synthase III, large subunit compare
Atu2718 -4.9 -10.0 homoserine O-succinyltransferase compare
Atu1308 -4.9 -7.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0043 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase compare
Atu2040 -4.8 -6.6 phosphoserine phosphatase compare
Atu1359 -4.8 -2.0 dnaK deletion suppressor protein compare
Atu0041 -4.7 -3.3 glutamine amidotransferase compare
Atu3740 -4.7 -12.9 fructose bisphosphate aldolase compare
Atu0017 -4.7 -4.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0039 -4.7 -3.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu3485 -4.6 -12.7 short chain dehydrogenase compare
Atu0298 -4.6 -9.3 orotidine 5 compare
Atu2015 -4.6 -11.8 aminotransferase compare
Atu3482 -4.5 -11.2 pantoate--beta-alanine ligase compare
Atu0486 -4.5 -8.0 dihydroorotate dehydrogenase compare
Atu0647 -4.3 -7.7 phosphoribosylamine--glycine ligase compare
Atu2790 -4.2 -3.4 3-isopropylmalate dehydratase, small subunit compare
Atu2205 -4.0 -9.1 transcriptional regulator, MarR family compare
Atu1075 -3.9 -9.1 amidophosphoribosyltransferase compare
Atu1845 -3.9 -5.1 phosphoribosylformylglycinamidine synthase I compare
Atu3731 -3.7 -8.9 5-formyltetrahydrofolate cyclo-ligase compare
Atu1307 -3.7 -6.7 dihydroorotase compare
Atu3783 -3.5 -17.0 glutamate synthase subunit beta compare
Atu1030 -3.4 -3.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3492 -3.3 -5.4 sugar kinase conserved
Atu1456 -3.2 -12.6 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1686 -3.2 -15.3 peptidyl-prolyl cis-trans isomerse D compare
Atu1620 -3.0 -12.6 triosephosphate isomerase compare
Atu1455 -2.9 -5.1 hypothetical protein compare
Atu3488 -2.9 -7.3 ABC transporter permease conserved
Atu3486 -2.9 -4.3 DeoR family transcriptional regulator compare
Atu3489 -2.9 -15.5 ABC transporter permease conserved
Atu3784 -2.9 -20.9 glutamate synthase large subunit compare
Atu3490 -2.8 -16.1 ABC transporter permease conserved
Atu3484 -2.8 -11.3 hypothetical protein conserved
Atu0040 -2.8 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3739 -2.8 -3.7 phosphoglycerate kinase compare
Atu3487 -2.8 -12.4 sugar ABC transporter substrate-binding protein conserved
Atu0030 -2.7 -2.5 phosphocarrier protein HPr compare
Atu2548 -2.7 -16.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4096 -2.6 -12.6 nicotinate-nucleotide pyrophosphorylase compare
Atu1454 -2.6 -9.2 siroheme synthase compare
Atu3491 -2.5 -3.5 hypothetical protein conserved
Atu1464 -2.5 -8.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu0723 -2.5 -2.3 FAD dependent oxidoreductase compare
Atu1462 -2.4 -12.6 glycine cleavage system protein P2 compare
Atu1463 -2.4 -7.0 glycine cleavage system component H compare
Atu4098 -2.4 -11.4 quinolinate synthetase compare
Atu0029 -2.4 -7.5 S-adenosylhomocysteine hydrolase compare
Atu0792 -2.3 -4.8 hypothetical protein compare
Atu1589 -2.3 -6.8 aminotransferase, class I compare
Atu2115 -2.3 -10.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2155 -2.2 -16.6 methionine synthase compare
Atu0641 -2.2 -4.8 hypothetical protein compare
Atu3469 -1.8 -2.7 phosphoglyceromutase compare
Atu3871 -1.8 -7.7 L-lactate dehydrogenase compare
Atu0502 -1.7 -5.6 acetyl-CoA acetyltransferase compare
Atu0501 -1.7 -8.9 acyl-CoA dehydrogenase compare
Atu0976 -1.7 -1.7 cycL protein compare
Atu0503 -1.6 -10.4 enoyl-CoA hydratase compare
Atu0876 -1.5 -1.5 superoxide dismutase compare
Atu4097 -1.5 -7.9 L-aspartate oxidase compare
Atu1446 -1.5 -3.1 two component response regulator compare
Atu4792 -1.5 -2.3 hypothetical protein compare
Atu3997 -1.5 -9.9 biotin synthetase compare
Atu3496 -1.4 -4.7 hypothetical protein compare
Atu8115 -1.4 -4.8 Hypothetical Protein compare
Atu2803 -1.4 -4.3 Cobalamin biosynthesis associated protein compare
Atu0188 -1.4 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu6114 -1.4 -2.2 hypothetical protein compare
Atu0769 -1.3 -2.0 protoheme IX farnesyltransferase compare
Atu3999 -1.3 -2.3 dithiobiotin synthetase compare
Atu4616 -1.3 -2.8 dTDP-4-dehydrorhamnose reductase compare
Atu5142 -1.3 -2.2 hypothetical protein compare
Atu1028 -1.3 -1.9 hypothetical protein compare
Atu2569 -1.3 -8.2 thiamine biosynthesis protein compare
Atu1457 -1.2 -1.8 hypothetical protein compare
Atu0422 -1.2 -2.3 ABC transporter, membrane spanning protein compare
Atu1242 -1.2 -6.1 cytochrome oxidase assembly factor compare
Atu2209 -1.2 -4.2 pyrroline-5-carboxylate reductase compare
Atu0346 -1.2 -3.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1778 -1.2 -8.9 transcription-repair coupling factor compare
Atu3289 -1.2 -4.5 thiamine-phosphate pyrophosphorylase compare
Atu0421 -1.2 -1.6 ABC transporter, membrane spanning protein compare
Atu0886 -1.1 -1.4 hypothetical protein compare
Atu3288 -1.1 -6.3 hydroxyethylthiazole kinase compare
Atu3732 -1.1 -4.3 hemolysin compare
Atu0405 -1.1 -8.3 long-chain-fatty-acid-CoA-ligase compare
Atu3008 -1.1 -1.1 hypothetical protein compare
Atu4161 -1.1 -2.4 hypothetical protein compare
Atu3998 -1.1 -7.2 8-amino-7-oxononanoate synthase compare
Atu3290 -1.1 -5.4 phosphomethylpyrimidine kinase compare
Atu1422 -1.1 -6.7 transcriptional regulator, MarR family compare
Atu4505 -1.1 -5.1 LacI family transcriptional regulator compare
Atu6165 -1.0 -1.1 hypothetical protein compare
Atu2799 -1.0 -3.9 precorrin-6x reductase compare
Atu0189 -1.0 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu1074 -1.0 -6.7 NAD/NADP dependent oxidoreductase compare
Atu1748 -1.0 -5.8 NIFU-like protein compare
Atu1774 -1.0 -5.3 ABC transporter, substrate binding protein (peptide) compare
Atu2237 -1.0 -4.4 cytochrome c1 compare
Atu0190 -1.0 -4.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2808 -1.0 -4.1 cobyric acid synthase compare
Atu4477 -1.0 -5.0 TetR family transcriptional regulator compare
Atu4000 -1.0 -7.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu0025 -1.0 -2.0 hypothetical protein compare
Atu2239 -1.0 -2.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3712 -1.0 -1.8 hypothetical protein compare
Atu0525 -0.9 -4.0 transcriptional regulator, LuxR family compare
Atu2238 -0.9 -5.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4223 -0.9 -2.2 sarcosine oxidase delta subunit compare
Atu3598 -0.9 -2.5 thiol:disulfide interchange protein compare
Atu1891 -0.9 -2.6 cobalamin biosynthesis protein compare
Atu1705 -0.9 -4.7 SEC-independent protein translocase protein compare
Atu2805 -0.9 -4.1 cobalamin synthesis protein compare
Atu2800 -0.9 -1.4 precorrin-3B C17-methyltransferase compare
Atu0768 -0.9 -5.5 cytochrome-c oxidase chain I compare
Atu0434 -0.9 -2.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4173 -0.9 -2.3 phosphoenolpyruvate-protein phosphotransferase compare
Atu1286 -0.9 -3.1 hypothetical protein compare
Atu2795 -0.9 -3.8 cobalamin biosynthetic protein compare
Atu4317 -0.9 -2.5 TetR family transcriptional regulator compare
Atu2746 -0.9 -2.9 hypothetical protein compare
Atu2798 -0.9 -2.9 precorrin-6y methyltransferase compare
Atu2796 -0.8 -3.4 precorrin-4 C11-methyltransferase compare
Atu4743 -0.8 -4.6 LacI family transcriptional regulator compare
Atu0767 -0.8 -2.2 cytochrome c oxidase subunit II compare
Atu2682 -0.8 -2.3 hypothetical protein compare
Atu4001 -0.8 -4.1 3-oxoacyl-ACP synthase compare
Atu4099 -0.8 -3.8 hypothetical protein compare
Atu0331 -0.8 -1.7 sigma-54 modulation protein compare
Atu1717 -0.8 -4.2 long-chain fatty acid transport protein compare
Atu0031 -0.8 -1.1 PTS system, IIA component compare
Atu2793 -0.8 -3.0 cobyrinic acid a,c-diamide synthase compare
Atu3012 -0.8 -1.3 hypothetical protein compare
Atu0524 -0.8 -3.7 transcriptional regulator, LuxR family compare
Atu0101 -0.8 -2.6 cytochrome c compare
Atu1685 -0.8 -0.9 hypothetical protein compare
Atu1542 -0.7 -3.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0687 -0.7 -0.9 hypothetical protein compare
Atu1419 -0.7 -2.8 transcriptional regulator, GntR family compare
Atu0770 -0.7 -3.0 cytochrome C oxidase assembly protein compare
Atu5157 -0.7 -1.5 hypothetical protein compare
Atu1191 -0.7 -1.0 hypothetical protein compare
Atu0291 -0.7 -3.7 hypothetical protein compare
Atu1699 -0.7 -1.8 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu4072 -0.7 -1.3 nodulation protein N compare
Atu5125 -0.7 -2.8 GntR family transcriptional regulator compare
Atu1163 -0.7 -1.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1260 -0.7 -1.1 hypothetical protein compare
Atu0837 -0.7 -3.3 transcriptional regulator, MarR family compare
Atu5430 -0.7 -0.8 hypothetical protein compare
Atu8025 -0.7 -1.0 hypothetical protein compare
Atu0677 -0.7 -1.2 hypothetical protein compare
Atu2662 -0.7 -0.9 acetyltransferase compare
Atu3031 -0.6 -1.0 hypothetical protein compare
Atu1372 -0.6 -2.1 hypothetical protein compare
Atu0703 -0.6 -1.3 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu4148 -0.6 -2.8 UDP-glucuronic acid epimerase compare
Atu0977 -0.6 -2.6 serine protease DO-like protease compare
Atu2017 -0.6 -0.9 hypothetical protein compare
Atu5158 -0.6 -2.5 hypothetical protein compare
Atu1522 -0.6 -3.6 transcriptional regulator, LacI family compare
Atu0322 -0.6 -2.5 enoyl CoA hydratase compare
Atu2807 -0.6 -2.7 cob(I)alamin adenosyltransferase compare
Atu4685 -0.6 -3.9 LacI family transcriptional regulator compare
Atu0272 -0.6 -3.8 transcriptional regulator, MarR family compare
Atu0601 -0.6 -3.9 oxidoreductase compare
Atu3337 -0.6 -4.1 LacI family transcriptional regulator compare
Atu2770 -0.6 -2.4 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source L-Rhamnose monohydrate in Agrobacterium fabrum C58

For carbon source L-Rhamnose monohydrate across organisms