Experiment set2IT007 for Agrobacterium fabrum C58

Compare to:

alpha-Lactose carbon source

200 most important genes:

  gene name fitness t score description  
Atu1844 -5.6 -5.4 Phosphoribosylformylglycinamidine synthetase compare
Atu0400 -5.2 -6.3 orotate phosphoribosyltransferase compare
Atu1750 -5.1 -7.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu0043 -5.0 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu2289 -5.0 -20.8 anthranilate synthase component I and II compare
Atu2036 -5.0 -18.2 acetolactate synthase III, large subunit compare
Atu1205 -4.9 -16.4 threonine dehydratase compare
Atu1687 -4.9 -13.8 anthranilate phosphoribosyltransferase compare
Atu1688 -4.8 -8.7 indole-3-glycerol-phosphate synthase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0537 -4.8 -8.6 histidinol dehydrogenase compare
Atu0679 -4.8 -6.8 ATP phosphoribosyltransferase compare
Atu2264 -4.7 -15.9 2-isopropylmalate synthase compare
Atu3755 -4.7 -7.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3706 -4.7 -11.2 D-3-phosphoglycerate dehydrogenase compare
Atu2791 -4.6 -8.3 3-isopropylmalate dehydrogenase compare
Atu2726 -4.5 -22.0 pyruvate carboxylase compare
Atu3707 -4.5 -5.0 phosphoserine aminotransferase compare
Atu0030 -4.5 -2.5 phosphocarrier protein HPr compare
Atu2650 -4.4 -12.6 glycerol-3-phosphate dehydrogenase compare
Atu0099 -4.4 -13.3 prephenate dehydratase compare
Atu1308 -4.3 -5.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0399 -4.3 -9.2 dihydroorotase compare
Atu0346 -4.2 -5.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2709 -4.2 -18.5 3-isopropylmalate dehydratase, large subunit compare
Atu0678 -4.2 -8.9 histidyl-tRNA synthetase compare
Atu3469 -4.2 -4.0 phosphoglyceromutase compare
Atu3885 -4.1 -10.6 inositol monophosphatase compare
Atu1588 -4.0 -11.2 homoserine dehydrogenase compare
Atu3754 -4.0 -11.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0298 -4.0 -8.1 orotidine 5 compare
Atu0647 -4.0 -7.8 phosphoribosylamine--glycine ligase compare
Atu2040 -3.9 -7.5 phosphoserine phosphatase compare
Atu1850 -3.9 -5.4 phosphoribosylformylglycinamidine synthetase II compare
Atu2718 -3.9 -10.3 homoserine O-succinyltransferase compare
Atu1307 -3.8 -6.7 dihydroorotase compare
Atu0432 -3.8 -8.5 O-succinylhomoserine sulfhydrylase compare
Atu1141 -3.7 -7.1 Phosphoribosylglycinamide synthetase compare
Atu3482 -3.6 -9.1 pantoate--beta-alanine ligase compare
Atu0038 -3.5 -5.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3483 -3.5 -7.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2790 -3.4 -2.4 3-isopropylmalate dehydratase, small subunit compare
Atu1075 -3.4 -8.0 amidophosphoribosyltransferase compare
Atu3783 -3.4 -13.8 glutamate synthase subunit beta compare
Atu3784 -3.2 -23.1 glutamate synthase large subunit compare
Atu0017 -3.2 -4.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1845 -3.2 -6.6 phosphoribosylformylglycinamidine synthase I compare
Atu2747 -3.1 -13.6 hypothetical protein compare
Atu3147 -3.1 -15.0 oxidoreductase compare
Atu0486 -3.0 -7.1 dihydroorotate dehydrogenase compare
Atu0590 -3.0 -12.3 transcriptional regulator repressor compare
Atu3739 -3.0 -4.0 phosphoglycerate kinase compare
Atu1446 -3.0 -3.8 two component response regulator compare
Atu2015 -2.9 -13.5 aminotransferase compare
Atu3148 -2.9 -10.3 sugar ABC transporter ATPase compare
Atu3152 -2.9 -10.5 AraC family transcriptional regulator compare
Atu1140 -2.9 -7.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0040 -2.8 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1030 -2.8 -2.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3149 -2.8 -10.6 sugar ABC transporter permease compare
Atu0769 -2.8 -3.1 protoheme IX farnesyltransferase compare
Atu3151 -2.7 -11.2 sugar ABC transporter substrate-binding protein compare
Atu1113 -2.5 -7.4 dehydrogenase compare
Atu3150 -2.5 -6.7 sugar ABC transporter permease compare
Atu1454 -2.4 -8.2 siroheme synthase compare
Atu0641 -2.4 -5.2 hypothetical protein compare
Atu1456 -2.4 -11.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1359 -2.2 -1.7 dnaK deletion suppressor protein compare
Atu0041 -2.2 -2.5 glutamine amidotransferase compare
Atu3348 -2.2 -9.1 hypothetical protein compare
Atu3763 -2.1 -2.7 hypothetical protein compare
Atu3731 -2.0 -8.0 5-formyltetrahydrofolate cyclo-ligase compare
Atu1686 -2.0 -13.5 peptidyl-prolyl cis-trans isomerse D compare
Atu4485 -2.0 -9.4 beta-glucosidase compare
Atu3347 -1.9 -9.5 hypothetical protein compare
Atu0434 -1.9 -2.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1463 -1.8 -7.1 glycine cleavage system component H compare
Atu1455 -1.8 -4.6 hypothetical protein compare
Atu2548 -1.7 -11.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1589 -1.7 -5.8 aminotransferase, class I compare
Atu0184 -1.7 -2.7 glucokinase compare
Atu2155 -1.6 -11.4 methionine synthase compare
Atu0703 -1.6 -3.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu3219 -1.5 -10.1 dihydroxy-acid dehydratase compare
Atu4098 -1.5 -11.1 quinolinate synthetase compare
Atu1462 -1.5 -9.2 glycine cleavage system protein P2 compare
Atu4176 -1.4 -6.5 hypothetical protein compare
Atu1457 -1.4 -2.0 hypothetical protein compare
Atu4097 -1.4 -7.3 L-aspartate oxidase compare
Atu1028 -1.4 -2.0 hypothetical protein compare
Atu1748 -1.3 -8.0 NIFU-like protein compare
Atu4773 -1.3 -1.5 two component response regulator compare
Atu1685 -1.2 -1.3 hypothetical protein compare
Atu4096 -1.2 -7.2 nicotinate-nucleotide pyrophosphorylase compare
Atu0322 -1.2 -4.8 enoyl CoA hydratase compare
Atu0190 -1.1 -5.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2123 -1.1 -3.5 methylenetetrahydrofolate reductase compare
Atu1620 -1.1 -6.7 triosephosphate isomerase compare
Atu0702 -1.1 -3.1 calcium-binding protein, regucalcin compare
Atu0225 -1.0 -1.1 hypothetical protein compare
Atu0846 -1.0 -2.6 transcriptional regulator, MarR family compare
Atu2209 -1.0 -3.3 pyrroline-5-carboxylate reductase compare
Atu3120 -1.0 -1.2 hypothetical protein compare
Atu5142 -1.0 -1.6 hypothetical protein compare
Atu1847 -1.0 -2.0 hypothetical protein compare
Atu1445 -1.0 -3.5 two component sensor kinase compare
Atu2124 -1.0 -3.3 transcriptional regulator, ArsR family compare
Atu3999 -1.0 -2.9 dithiobiotin synthetase compare
Atu2293 -0.9 -1.6 hypothetical protein compare
Atu1774 -0.9 -5.3 ABC transporter, substrate binding protein (peptide) compare
Atu2796 -0.9 -3.8 precorrin-4 C11-methyltransferase compare
Atu4173 -0.9 -2.4 phosphoenolpyruvate-protein phosphotransferase compare
Atu3351 -0.9 -3.6 sugar ABC transporter permease compare
Atu0115 -0.9 -1.1 hypothetical protein compare
Atu0536 -0.9 -3.5 hypothetical protein compare
Atu1242 -0.9 -4.7 cytochrome oxidase assembly factor compare
Atu8162 -0.9 -1.3 hypothetical protein compare
Atu0894 -0.9 -2.2 ABC transporter, membrane spanning protein compare
Atu0659 -0.9 -3.9 NTP pyrophosphohydrolase, MutT family compare
Atu3732 -0.8 -5.3 hemolysin compare
Atu1629 -0.8 -1.1 transcriptional regulator, ArsR family compare
Atu0101 -0.8 -3.2 cytochrome c compare
Atu3468 -0.8 -0.8 hypothetical protein compare
Atu3746 -0.8 -2.2 hypothetical protein compare
Atu0768 -0.8 -4.9 cytochrome-c oxidase chain I compare
Atu3350 -0.8 -3.2 ABC transporter permease compare
Atu1717 -0.8 -5.7 long-chain fatty acid transport protein compare
Atu0792 -0.7 -4.0 hypothetical protein compare
Atu1705 -0.7 -3.0 SEC-independent protein translocase protein compare
Atu0771 -0.7 -3.7 cytochrome c oxidase subunit III compare
Atu0357 -0.7 -4.4 phosphate starvation inducible protein compare
Atu0784 -0.7 -1.5 hypothetical protein compare
Atu1725 -0.7 -2.9 hypothetical protein compare
Atu1260 -0.7 -1.2 hypothetical protein compare
Atu2827 -0.7 -1.6 hypothetical protein compare
Atu1464 -0.7 -3.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu2368 -0.7 -1.2 hypothetical protein compare
Atu2286 -0.7 -1.5 hypothetical protein compare
Atu6114 -0.7 -2.1 hypothetical protein compare
Atu2804 -0.7 -4.8 cobaltochelatase subunit compare
Atu1546 -0.7 -2.9 transcriptional regulator, MerR family compare
Atu3352 -0.7 -3.6 sugar ABC transporter substrate-binding protein compare
Atu0185 -0.7 -1.8 methylglyoxal synthase compare
Atu0413 -0.7 -1.4 stress induced protein compare
Atu2801 -0.7 -2.4 precorrin-2 C20 methyltransferase compare
Atu1592 -0.7 -4.6 hypothetical protein compare
Atu0601 -0.7 -4.3 oxidoreductase compare
Atu1667 -0.7 -1.4 hypothetical protein compare
Atu8115 -0.7 -2.6 Hypothetical Protein compare
Atu4671 -0.7 -1.8 response regulator compare
Atu4665 -0.7 -3.2 alpha-galactosidase compare
Atu2793 -0.6 -1.8 cobyrinic acid a,c-diamide synthase compare
Atu2239 -0.6 -1.5 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2442 -0.6 -1.6 hypothetical protein compare
Atu2237 -0.6 -2.9 cytochrome c1 compare
Atu3997 -0.6 -4.5 biotin synthetase compare
Atu0598 -0.6 -3.0 phosphogluconate dehydratase compare
Atu4000 -0.6 -4.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu2770 -0.6 -2.4 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2238 -0.6 -3.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu3486 -0.6 -1.3 DeoR family transcriptional regulator compare
Atu3998 -0.6 -3.6 8-amino-7-oxononanoate synthase compare
Atu2376 -0.6 -0.4 hypothetical protein compare
Atu2683 -0.6 -1.1 hypothetical protein compare
Atu3908 -0.6 -4.1 GntR family transcriptional regulator compare
Atu4685 -0.6 -3.2 LacI family transcriptional regulator compare
Atu3121 -0.6 -0.9 cold shock protein compare
Atu2777 -0.6 -4.3 hypothetical protein compare
Atu6181 -0.6 -2.0 virA/G regulated topoisomerase compare
Atu2020 -0.6 -2.2 transcriptional regulator, TetR family compare
Atu5540 -0.6 -0.6 hypothetical protein compare
Atu4187 -0.6 -1.0 tRNA-Met compare
Atu3392 -0.6 -1.6 methyltransferase compare
Atu2059 -0.6 -2.4 transcriptional regulator, TetR family compare
Atu2205 -0.6 -2.4 transcriptional regulator, MarR family compare
Atu0291 -0.6 -2.8 hypothetical protein compare
Atu2809 -0.6 -3.7 cobalamin biosynthesis protein compare
Atu5501 -0.6 -1.6 hypothetical protein compare
Atu3598 -0.5 -1.7 thiol:disulfide interchange protein compare
Atu0501 -0.5 -3.8 acyl-CoA dehydrogenase compare
Atu5173 -0.5 -1.5 dehydrogenase compare
Atu3667 -0.5 -1.9 aspartate alpha-decarboxylase compare
Atu0770 -0.5 -2.1 cytochrome C oxidase assembly protein compare
Atu2799 -0.5 -1.7 precorrin-6x reductase compare
Atu2452 -0.5 -2.5 hypothetical protein compare
Atu2808 -0.5 -3.6 cobyric acid synthase compare
Atu4053 -0.5 -1.0 succinoglycan biosynthesis protein compare
Atu1314 -0.5 -1.9 transcriptional regulator, TetR family compare
Atu2657 -0.5 -1.1 hypothetical protein compare
Atu6165 -0.5 -0.6 hypothetical protein compare
Atu0142 -0.5 -0.7 cytochrome o ubiquinol oxidase subunit II compare
Atu3327 -0.5 -2.0 succinoglycan exopolysaccharide synthesis protein compare
Atu1714 -0.5 -1.0 exonuclease III compare
Atu4317 -0.5 -2.1 TetR family transcriptional regulator compare
Atu0361 -0.5 -1.3 transcriptional regulator compare
Atu6040 -0.5 -2.1 conjugal transfer protein compare
Atu3240 -0.5 -3.3 ROK family transcriptional regulator compare
Atu1419 -0.5 -2.1 transcriptional regulator, GntR family compare
Atu0269 -0.5 -2.2 exodeoxyribonuclease VII large subunit compare
Atu2802 -0.5 -2.7 precorrin-8X methylmutase compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source alpha-Lactose in Agrobacterium fabrum C58

For carbon source alpha-Lactose across organisms