Experiment set2IT006 for Escherichia coli BW25113
Adenosine nitrogen source
Group: nitrogen sourceMedia: M9 minimal media_noNitrogen + Adenosine (2 mM)
Culturing: Keio_ML9, tube, Aerobic, at 37 (C), shaken=200 rpm
Growth: about 5.1 generations
By: Kelly on 6/19/2014
Media components: 4 g/L D-Glucose, 2 mM Magnesium sulfate, 0.1 mM Calcium chloride, 12.8 g/L Sodium phosphate dibasic heptahydrate, 3 g/L Potassium phosphate monobasic, 0.5 g/L Sodium Chloride
Specific Phenotypes
For 5 genes in this experiment
For nitrogen source Adenosine in Escherichia coli BW25113
For nitrogen source Adenosine across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Coenzyme A Biosynthesis | 2 |
| Heat shock dnaK gene cluster extended | 1 |
| tRNA processing | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| phosphopantothenate biosynthesis I | 4 | 4 | 2 |
| phosphopantothenate biosynthesis III (archaea) | 4 | 2 | 1 |
| superpathway of coenzyme A biosynthesis I (bacteria) | 9 | 9 | 2 |
| tRNA processing | 10 | 10 | 2 |
| superpathway of coenzyme A biosynthesis II (plants) | 10 | 5 | 2 |