Experiment set2IT006 for Agrobacterium fabrum C58

Compare to:

alpha-Lactose carbon source

200 most important genes:

  gene name fitness t score description  
Atu0537 -5.7 -7.9 histidinol dehydrogenase compare
Atu1687 -5.4 -10.4 anthranilate phosphoribosyltransferase compare
Atu0043 -5.2 -3.6 imidazoleglycerol-phosphate dehydratase compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu3755 -5.0 -7.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2709 -5.0 -19.7 3-isopropylmalate dehydratase, large subunit compare
Atu0099 -5.0 -16.7 prephenate dehydratase compare
Atu2040 -4.9 -5.7 phosphoserine phosphatase compare
Atu2289 -4.9 -21.2 anthranilate synthase component I and II compare
Atu3754 -4.7 -7.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1588 -4.6 -13.0 homoserine dehydrogenase compare
Atu2036 -4.6 -17.0 acetolactate synthase III, large subunit compare
Atu2264 -4.6 -12.7 2-isopropylmalate synthase compare
Atu3706 -4.5 -12.0 D-3-phosphoglycerate dehydrogenase compare
Atu0678 -4.4 -9.8 histidyl-tRNA synthetase compare
Atu2650 -4.4 -14.4 glycerol-3-phosphate dehydrogenase compare
Atu0038 -4.3 -5.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2726 -4.3 -24.1 pyruvate carboxylase compare
Atu1688 -4.2 -9.0 indole-3-glycerol-phosphate synthase compare
Atu1205 -4.2 -17.4 threonine dehydratase compare
Atu0679 -4.2 -7.2 ATP phosphoribosyltransferase compare
Atu1750 -4.2 -5.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu2791 -4.1 -11.8 3-isopropylmalate dehydrogenase compare
Atu0399 -4.0 -10.6 dihydroorotase compare
Atu0400 -3.9 -4.4 orotate phosphoribosyltransferase compare
Atu3783 -3.9 -16.8 glutamate synthase subunit beta compare
Atu0030 -3.9 -2.5 phosphocarrier protein HPr compare
Atu2790 -3.8 -3.3 3-isopropylmalate dehydratase, small subunit compare
Atu0346 -3.8 -5.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1446 -3.8 -4.5 two component response regulator compare
Atu0432 -3.8 -12.2 O-succinylhomoserine sulfhydrylase compare
Atu0184 -3.7 -5.6 glucokinase compare
Atu1030 -3.6 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1850 -3.5 -5.6 phosphoribosylformylglycinamidine synthetase II compare
Atu2747 -3.5 -16.1 hypothetical protein compare
Atu1140 -3.5 -8.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3784 -3.5 -24.3 glutamate synthase large subunit compare
Atu2718 -3.5 -7.1 homoserine O-succinyltransferase compare
Atu3707 -3.3 -4.9 phosphoserine aminotransferase compare
Atu3885 -3.3 -9.5 inositol monophosphatase compare
Atu0298 -3.3 -8.9 orotidine 5 compare
Atu1844 -3.3 -4.2 Phosphoribosylformylglycinamidine synthetase compare
Atu1141 -3.2 -7.5 Phosphoribosylglycinamide synthetase compare
Atu0590 -3.2 -10.7 transcriptional regulator repressor compare
Atu1075 -3.2 -8.8 amidophosphoribosyltransferase compare
Atu0017 -3.2 -5.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0039 -3.2 -3.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0647 -3.1 -10.1 phosphoribosylamine--glycine ligase compare
Atu3483 -3.0 -6.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1308 -3.0 -7.1 aspartate carbamoyl transferase catalytic subunit compare
Atu3151 -3.0 -10.9 sugar ABC transporter substrate-binding protein compare
Atu3482 -3.0 -7.9 pantoate--beta-alanine ligase compare
Atu3147 -3.0 -15.8 oxidoreductase compare
Atu0040 -3.0 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3739 -2.9 -4.5 phosphoglycerate kinase compare
Atu3148 -2.8 -9.1 sugar ABC transporter ATPase compare
Atu3150 -2.8 -7.5 sugar ABC transporter permease compare
Atu1454 -2.7 -7.7 siroheme synthase compare
Atu3152 -2.7 -7.8 AraC family transcriptional regulator compare
Atu1307 -2.6 -7.2 dihydroorotase compare
Atu0486 -2.6 -7.6 dihydroorotate dehydrogenase compare
Atu2015 -2.6 -11.9 aminotransferase compare
Atu0641 -2.5 -5.1 hypothetical protein compare
Atu1456 -2.5 -10.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3149 -2.4 -9.3 sugar ABC transporter permease compare
Atu4485 -2.4 -11.2 beta-glucosidase compare
Atu3763 -2.4 -2.9 hypothetical protein compare
Atu1845 -2.4 -6.5 phosphoribosylformylglycinamidine synthase I compare
Atu3731 -2.2 -11.8 5-formyltetrahydrofolate cyclo-ligase compare
Atu3348 -2.2 -11.0 hypothetical protein compare
Atu1113 -2.2 -8.2 dehydrogenase compare
Atu1455 -2.1 -4.2 hypothetical protein compare
Atu1686 -2.1 -12.4 peptidyl-prolyl cis-trans isomerse D compare
Atu3347 -2.0 -9.2 hypothetical protein compare
Atu3469 -2.0 -3.2 phosphoglyceromutase compare
Atu0703 -2.0 -2.5 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu2155 -1.9 -13.0 methionine synthase compare
Atu1463 -1.8 -9.5 glycine cleavage system component H compare
Atu1589 -1.8 -8.8 aminotransferase, class I compare
Atu2548 -1.8 -11.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1462 -1.8 -11.6 glycine cleavage system protein P2 compare
Atu1359 -1.8 -1.5 dnaK deletion suppressor protein compare
Atu1685 -1.8 -1.5 hypothetical protein compare
Atu5430 -1.7 -1.5 hypothetical protein compare
Atu4098 -1.7 -10.0 quinolinate synthetase compare
Atu1464 -1.6 -8.6 glycine cleavage system T protein, aminomethyltransferase compare
Atu4097 -1.5 -8.7 L-aspartate oxidase compare
Atu3219 -1.5 -8.8 dihydroxy-acid dehydratase compare
Atu1748 -1.5 -6.6 NIFU-like protein compare
Atu0322 -1.5 -7.1 enoyl CoA hydratase compare
Atu0769 -1.4 -1.9 protoheme IX farnesyltransferase compare
Atu0434 -1.4 -3.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1457 -1.4 -2.9 hypothetical protein compare
Atu4096 -1.3 -7.4 nicotinate-nucleotide pyrophosphorylase compare
Atu1286 -1.3 -4.4 hypothetical protein compare
Atu4176 -1.3 -6.4 hypothetical protein compare
Atu1445 -1.3 -4.7 two component sensor kinase compare
Atu4773 -1.3 -2.3 two component response regulator compare
Atu1223 -1.3 -1.8 hypothetical protein compare
Atu0702 -1.3 -3.6 calcium-binding protein, regucalcin compare
Atu2205 -1.2 -4.2 transcriptional regulator, MarR family compare
Atu2209 -1.1 -4.4 pyrroline-5-carboxylate reductase compare
Atu5173 -1.1 -2.5 dehydrogenase compare
Atu4173 -1.1 -2.7 phosphoenolpyruvate-protein phosphotransferase compare
Atu1103 -1.1 -2.4 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3598 -1.1 -2.6 thiol:disulfide interchange protein compare
Atu2123 -1.1 -4.6 methylenetetrahydrofolate reductase compare
Atu3351 -1.1 -4.7 sugar ABC transporter permease compare
Atu0185 -1.1 -3.0 methylglyoxal synthase compare
Atu0792 -1.0 -4.7 hypothetical protein compare
Atu0598 -1.0 -4.2 phosphogluconate dehydratase compare
Atu2376 -1.0 -0.8 hypothetical protein compare
Atu2801 -1.0 -4.4 precorrin-2 C20 methyltransferase compare
Atu3730 -1.0 -1.3 hypothetical protein compare
Atu1242 -1.0 -5.8 cytochrome oxidase assembly factor compare
Atu0188 -1.0 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu6098 -1.0 -0.8 transcriptional regulator, HTH family compare
Atu0770 -1.0 -4.5 cytochrome C oxidase assembly protein compare
Atu0768 -0.9 -6.1 cytochrome-c oxidase chain I compare
Atu1620 -0.9 -5.9 triosephosphate isomerase compare
Atu8115 -0.9 -3.6 Hypothetical Protein compare
Atu1354 -0.9 -0.9 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0190 -0.9 -4.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3423 -0.9 -2.1 hypothetical protein compare
Atu6106 -0.9 -2.8 conserved hypothetical protein compare
Atu3999 -0.9 -1.9 dithiobiotin synthetase compare
Atu1774 -0.9 -4.3 ABC transporter, substrate binding protein (peptide) compare
Atu2554 -0.9 -1.5 lysyl-tRNA synthetase compare
Atu3183 -0.8 -0.9 hypothetical protein compare
Atu0659 -0.8 -3.0 NTP pyrophosphohydrolase, MutT family compare
Atu4677 -0.8 -1.2 hypothetical protein compare
Atu2827 -0.8 -3.6 hypothetical protein compare
Atu4502 -0.8 -5.3 cobalamin synthesis protein compare
Atu3350 -0.8 -3.5 ABC transporter permease compare
Atu0767 -0.8 -4.0 cytochrome c oxidase subunit II compare
Atu0771 -0.8 -4.7 cytochrome c oxidase subunit III compare
Atu0894 -0.8 -1.8 ABC transporter, membrane spanning protein compare
Atu2532 -0.8 -2.8 transcriptional regulator, MarR family compare
Atu0029 -0.8 -3.0 S-adenosylhomocysteine hydrolase compare
Atu2239 -0.8 -3.3 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3122 -0.7 -2.7 cold shock protein compare
Atu8088 -0.7 -1.4 hypothetical protein compare
Atu0876 -0.7 -1.1 superoxide dismutase compare
Atu2237 -0.7 -3.0 cytochrome c1 compare
Atu0501 -0.7 -5.2 acyl-CoA dehydrogenase compare
Atu0405 -0.7 -5.5 long-chain-fatty-acid-CoA-ligase compare
Atu0189 -0.7 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0502 -0.7 -2.9 acetyl-CoA acetyltransferase compare
Atu0687 -0.7 -1.0 hypothetical protein compare
Atu5157 -0.7 -1.6 hypothetical protein compare
Atu2793 -0.7 -2.9 cobyrinic acid a,c-diamide synthase compare
Atu2555 -0.7 -2.7 L-lysine 2,3-aminomutase compare
Atu2238 -0.7 -3.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0049 -0.7 -1.1 hypothetical protein compare
Atu8034 -0.7 -2.1 hypothetical protein compare
Atu2442 -0.7 -2.2 hypothetical protein compare
Atu2808 -0.7 -4.1 cobyric acid synthase compare
Atu3429 -0.7 -1.0 hypothetical protein compare
Atu3352 -0.7 -3.5 sugar ABC transporter substrate-binding protein compare
Atu1705 -0.7 -1.5 SEC-independent protein translocase protein compare
Atu1327 -0.7 -1.4 NADH-ubiquinone oxidoreductase compare
Atu0357 -0.6 -3.7 phosphate starvation inducible protein compare
Atu2800 -0.6 -2.1 precorrin-3B C17-methyltransferase compare
Atu1160 -0.6 -3.3 hypothetical protein compare
Atu0976 -0.6 -2.3 cycL protein compare
Atu3732 -0.6 -3.4 hemolysin compare
Atu3998 -0.6 -4.3 8-amino-7-oxononanoate synthase compare
Atu2803 -0.6 -2.4 Cobalamin biosynthesis associated protein compare
Atu0419 -0.6 -1.1 two component sensor kinase compare
Atu2777 -0.6 -3.3 hypothetical protein compare
Atu3349 -0.6 -2.0 ABC transporter permease compare
Atu0421 -0.6 -1.0 ABC transporter, membrane spanning protein compare
Atu1074 -0.6 -3.9 NAD/NADP dependent oxidoreductase compare
Atu3908 -0.6 -3.4 GntR family transcriptional regulator compare
Atu1028 -0.6 -1.3 hypothetical protein compare
Atu2799 -0.6 -2.8 precorrin-6x reductase compare
Atu4000 -0.6 -4.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu4616 -0.6 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu5057 -0.6 -1.3 hypothetical protein compare
Atu1021 -0.6 -1.6 outer membrane protein compare
Atu1717 -0.6 -3.7 long-chain fatty acid transport protein compare
Atu4711 -0.6 -2.8 two component sensor kinase compare
Atu0640 -0.6 -1.9 hypothetical protein compare
Atu2796 -0.6 -2.9 precorrin-4 C11-methyltransferase compare
Atu2753 -0.6 -3.4 ATP-dependent helicase compare
Atu0846 -0.6 -2.2 transcriptional regulator, MarR family compare
Atu0536 -0.6 -3.2 hypothetical protein compare
Atu1219 -0.6 -0.6 hypothetical protein compare
Atu0062 -0.6 -3.6 transcriptional regulator, ROK family compare
Atu4685 -0.6 -3.2 LacI family transcriptional regulator compare
Atu1191 -0.5 -2.1 hypothetical protein compare
Atu1855 -0.5 -3.2 MFS permease compare
Atu3963 -0.5 -3.6 GntR family transcriptional regulator compare
Atu2286 -0.5 -1.2 hypothetical protein compare
Atu6181 -0.5 -2.3 virA/G regulated topoisomerase compare
Atu0130 -0.5 -1.7 cytidine deaminase compare
Atu4665 -0.5 -3.7 alpha-galactosidase compare
Atu8020 -0.5 -1.7 hypothetical protein compare
Atu3997 -0.5 -4.3 biotin synthetase compare
Atu2267 -0.5 -2.4 hypothetical protein compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source alpha-Lactose in Agrobacterium fabrum C58

For carbon source alpha-Lactose across organisms