Experiment set2IT006 for Agrobacterium fabrum C58

Compare to:

alpha-Lactose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu3001 +1.6 4.1 hypothetical protein compare
Atu4896 +1.6 4.5 acetyltransferase compare
Atu4099 +1.5 7.6 hypothetical protein compare
Atu3011 +1.5 4.3 ArsR family transcriptional regulator compare
Atu4897 +1.4 2.7 hypothetical protein compare
Atu3014 +1.4 3.5 hypothetical protein compare
Atu3012 +1.3 2.8 hypothetical protein compare
Atu0786 +1.3 6.4 peptidase, family M16 compare
Atu3006 +1.2 5.3 hypothetical protein compare
Atu6036 +1.1 1.5 entry-exclusion protein compare
Atu5115 +1.1 2.8 hypothetical protein compare
Atu3010 +1.0 6.5 hypothetical protein compare
Atu1980 +1.0 3.3 hypothetical protein compare
Atu3013 +0.9 4.4 hypothetical protein compare
Atu4893 +0.9 3.7 hypothetical protein compare
Atu4894 +0.9 5.5 transposase compare
Atu8202 +0.9 2.9 hypothetical protein compare
Atu2200 +0.9 3.9 cold shock protein compare
Atu0595 +0.9 5.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu4892 +0.9 6.5 hypothetical protein compare
Atu4887 +0.9 4.3 hypothetical protein compare
Atu0594 +0.9 5.6 alpha-glucosidase compare
Atu1570 +0.8 1.2 hypothetical protein compare
Atu8054 +0.8 0.8 hypothetical protein compare
Atu3009 +0.8 1.3 exopolysaccharide production protein compare
Atu4888 +0.8 3.1 hypothetical protein compare
Atu3022 +0.8 5.1 sugar ABC transporter permease compare
Atu0566 +0.8 2.1 hypothetical protein compare
Atu0025 +0.8 1.6 hypothetical protein compare
Atu1701 +0.8 2.8 protein-L-isoaspartate O-methyltransferase compare
Atu3016 +0.8 3.5 phosphoglyceromutase compare
Atu4875 +0.8 2.9 hypothetical protein compare
Atu3023 +0.7 5.5 sugar ABC transporter permease compare
Atu4880 +0.7 5.1 AraC family transcriptional regulator compare
Atu4884 +0.7 3.4 hypothetical protein compare
Atu0591 +0.7 5.7 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0593 +0.7 5.5 ABC transporter, membrane spanning protein compare
Atu4870 +0.7 4.2 NADP-dependent quinone oxidoreductase compare
Atu4095 +0.7 2.6 hypothetical protein compare
Atu0824 +0.7 1.2 hypothetical protein compare
Atu4889 +0.7 3.5 hypothetical protein compare
Atu2585 +0.7 3.9 hypothetical protein compare
Atu1535 +0.7 1.5 cytochrome c oxidase, FixQ chain compare
Atu3026 +0.7 3.9 short chain dehydrogenase compare
Atu3020 +0.7 4.1 GntR family transcriptional regulator compare
Atu3019 +0.7 4.6 hypothetical protein compare
Atu3609 +0.7 3.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu4882 +0.7 1.4 hypothetical protein compare
Atu3021 +0.7 4.2 sugar ABC transporter ATPase compare
Atu4881 +0.6 3.8 hypothetical protein compare
Atu3015 +0.6 3.2 hypothetical protein compare
Atu2067 +0.6 0.8 hypothetical protein compare
Atu3025 +0.6 5.1 oligo alginate lyase compare
Atu3018 +0.6 2.5 hypothetical protein compare
Atu0630 +0.6 2.0 hypothetical protein compare
Atu3008 +0.6 0.9 hypothetical protein compare
Atu4876 +0.6 4.2 oxidoreductase compare
Atu3033 +0.6 4.2 hypothetical protein compare
Atu3024 +0.6 4.5 sugar ABC transporter permease compare
Atu3034 +0.6 3.2 ROK family transcriptional regulator compare
Atu4890 +0.6 1.2 IS426 transposase compare
Atu4872 +0.6 3.7 LysR family transcriptional regulator compare
Atu4874 +0.6 4.1 hypothetical protein compare
Atu2606 +0.6 3.9 transcriptional regulator, GntR family compare
Atu3898 +0.6 2.8 DeoR family transcriptional regulator compare
Atu1830 +0.6 3.0 bacterioferritin comigratory protein compare
Atu5163 +0.6 2.3 type IV secretion protein AvhB2 compare
Atu1634 +0.6 1.0 hypothetical protein compare
Atu1640 +0.6 1.5 hypothetical protein compare
Atu0971 +0.6 2.2 two component sensor kinase compare
Atu1760 +0.5 1.1 hypothetical protein compare
Atu4864 +0.5 3.1 MarR family transcriptional regulator compare
Atu2204 +0.5 1.5 hypothetical protein compare
Atu4345 +0.5 2.1 hypothetical protein compare
Atu5549 +0.5 2.3 hypothetical protein compare
Atu1225 +0.5 0.6 hypothetical protein compare
Atu3757 +0.5 1.7 hypothetical protein compare
Atu5145 +0.5 1.5 acetyltransferase compare
Atu1062 +0.5 1.4 phosphatidylserine synthase compare
Atu8093 +0.5 2.6 hypothetical protein compare
Atu8018 +0.5 0.8 hypothetical protein compare
Atu2489 +0.5 3.3 hypothetical protein compare
Atu1628 +0.5 1.4 hypothetical protein compare
Atu4879 +0.5 2.8 hypothetical protein compare
Atu8132 +0.5 2.3 hypothetical protein compare
Atu2634 +0.5 1.6 hypothetical protein compare
Atu4869 +0.5 2.1 hypothetical protein compare
Atu2273 +0.5 2.2 hypothetical protein compare
Atu0026 +0.5 0.7 hypothetical protein compare
Atu8032 +0.5 2.1 hypothetical protein compare
Atu0562 +0.5 2.0 flagellar motor switch protein FliN compare
Atu1522 +0.5 3.1 transcriptional regulator, LacI family compare
Atu2832 +0.5 1.8 tRNA modification GTPase compare
Atu2163 +0.5 0.7 hypothetical protein compare
Atu3037 +0.5 3.0 dipeptide ABC transporter permease compare
Atu1023 +0.5 1.4 hypothetical protein compare
Atu5034 +0.5 1.4 hypothetical protein compare
Atu0576 +0.5 2.8 flagellar hook-associated protein compare
Atu2462 +0.5 1.3 hypothetical protein compare
Atu2608 +0.5 3.0 N-acetylglucosamine-6-phosphate deacetylase compare
Atu3036 +0.5 2.9 dipeptide ABC transporter permease compare
Atu5485 +0.5 1.2 hypothetical protein compare
Atu3027 +0.5 3.5 dehydrogenase compare
Atu4290 +0.5 1.3 hypothetical protein compare
Atu1683 +0.5 1.3 hypothetical protein compare
Atu0592 +0.5 2.7 ABC transporter, membrane spanning protein compare
Atu3017 +0.5 0.7 phosphoglyceromutase compare
Atu0535 +0.5 1.9 hypothetical protein compare
Atu2058 +0.5 1.3 hypothetical protein compare
Atu2729 +0.5 1.5 hypothetical protein compare
Atu1326 +0.5 2.2 acetyltransferase compare
Atu0213 +0.5 3.3 nicotinate phosphoribosyltransferase compare
Atu3518 +0.5 3.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu3928 +0.5 3.5 hypothetical protein compare
Atu3032 +0.4 1.3 hypothetical protein compare
Atu4035 +0.4 2.9 two component response regulator compare
Atu0922 +0.4 1.4 hypothetical protein compare
Atu0763 +0.4 2.8 hydrolase compare
Atu1213 +0.4 1.1 hypothetical protein compare
Atu4391 +0.4 1.3 nitric oxide reductase NorE protein compare
Atu0548 +0.4 3.1 flagellar L-ring protein precursor compare
Atu0559 +0.4 2.6 hypothetical protein compare
Atu3448 +0.4 2.8 dibenzothiophene desulfurization protein B compare
Atu3560 +0.4 2.1 glycosyltransferase compare
Atu3289 +0.4 2.2 thiamine-phosphate pyrophosphorylase compare
Atu2125 +0.4 0.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0093 +0.4 1.9 Recombination protein compare
Atu2441 +0.4 1.4 RNA methylase compare
Atu4311 +0.4 2.1 sarcosine oxidase delta subunit compare
Atu1203 +0.4 1.4 hypothetical protein compare
Atu0938 +0.4 1.6 transcriptional regulator, MerR family compare
Atu4859 +0.4 3.4 hypothetical protein compare
Atu1846 +0.4 0.8 hypothetical protein compare
Atu1470 +0.4 0.4 Camphor resistance protein compare
Atu3421 +0.4 2.5 hypothetical protein compare
Atu0755 +0.4 1.1 hypothetical protein compare
Atu0781 +0.4 2.2 hypothetical protein compare
Atu0070 +0.4 2.4 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu8191 +0.4 0.9 hypothetical protein compare
Atu4609 +0.4 3.2 glycosyltransferase compare
Atu0940 +0.4 1.2 PemK protein compare
Atu3029 +0.4 2.2 glucarate dehydratase compare
Atu0953 +0.4 0.4 hypothetical protein compare
Atu6138 +0.4 1.6 Repressor of the acc and arc operons compare
Atu2464 +0.4 1.4 formyltetrahydrofolate deformylase compare
Atu3655 +0.4 2.4 antioxidant protein compare
Atu0142 +0.4 0.9 cytochrome o ubiquinol oxidase subunit II compare
Atu1566 +0.4 0.5 hypothetical protein compare
Atu0706 +0.4 2.2 transcriptional regulator, IclR family compare
Atu0885 +0.4 1.2 hypothetical protein compare
Atu3515 +0.4 1.6 hypothetical protein compare
Atu3028 +0.4 2.2 hypothetical protein compare
Atu2379 +0.4 2.6 phosphomannomutase compare
Atu4608 +0.4 3.0 hypothetical protein compare
Atu0549 +0.4 2.4 hypothetical protein compare
Atu3293 +0.4 1.7 D-amino acid dehydrogenase small subunit compare
Atu1884 +0.4 1.6 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu0751 +0.4 2.1 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu2194 +0.4 1.4 hypothetical protein compare
Atu0050 +0.4 2.3 two component response regulator compare
Atu1503 +0.4 0.6 hypothetical protein compare
Atu3566 +0.4 1.7 hypothetical protein compare
Atu1581 +0.4 1.0 hypothetical protein compare
Atu1591 +0.4 1.5 hypothetical protein compare
Atu3035 +0.4 2.8 two component response regulator compare
Atu2577 +0.4 2.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu0225 +0.4 0.5 hypothetical protein compare
Atu1058 +0.4 1.6 hypothetical protein compare
Atu1888 +0.4 2.6 two component sensor kinase compare
Atu3973 +0.4 1.7 hypothetical protein compare
Atu8197 +0.4 1.8 NorF protein compare
Atu3270 +0.3 2.0 hypothetical protein compare
Atu6134 +0.3 1.6 transcriptional regulator compare
Atu3057 +0.3 2.7 hypothetical protein compare
Atu8159 +0.3 1.3 hypothetical protein compare
Atu1447 +0.3 0.7 two component sensor kinase compare
Atu3516 +0.3 1.4 MutT family NTP pyrophosphatase compare
Atu4234 +0.3 1.9 amino acid ABC transporter permease compare
Atu4862 +0.3 2.7 IS21 family transposase compare
Atu1678 +0.3 2.1 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu2574 +0.3 1.9 hypothetical protein compare
Atu4867 +0.3 2.2 hypothetical protein compare
Atu0809 +0.3 0.7 hypothetical protein compare
Atu4442 +0.3 1.7 hypothetical protein compare
Atu2583 +0.3 2.4 glycosyltransferase compare
Atu0956 +0.3 1.6 phage prohead protease compare
Atu3864 +0.3 1.7 hypothetical protein compare
Atu3317 +0.3 1.5 hypothetical protein compare
Atu6130 +0.3 1.8 conserved hypothetical protein compare
Atu3618 +0.3 2.5 hypothetical protein compare
Atu4878 +0.3 1.3 hypothetical protein compare
Atu5487 +0.3 1.8 hypothetical protein compare
Atu0859 +0.3 0.9 hypothetical protein compare
Atu0804 +0.3 1.9 proton/glutamate transport protein compare
Atu0997 +0.3 1.4 hypothetical protein compare
Atu4159 +0.3 1.4 AsnC family transcriptional regulator compare
Atu0578 +0.3 1.6 FlbT post-transcriptional regulator of flagellin compare
Atu4584 +0.3 2.1 TetR family transcriptional regulator compare
Atu0577 +0.3 1.8 FLAF protein compare
Atu0948 +0.3 1.5 hypothetical protein compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source alpha-Lactose in Agrobacterium fabrum C58

For carbon source alpha-Lactose across organisms