Experiment set2IT005 for Agrobacterium fabrum C58

Compare to:

L-ascorbate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Atu4086 -6.4 -10.7 gluconate 5-dehydrogenase compare
Atu4087 -6.0 -14.0 zinc-binding dehydrogenase compare
Atu0195 -5.9 -11.3 gluconokinase compare
Atu4691 -5.9 -16.1 2-hydroxyacid dehydrogenase compare
Atu1526 -5.8 -11.7 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu4085 -5.5 -11.1 2-hydroxy-3-oxopropionate reductase compare
Atu4687 -4.8 -15.9 amino acid ABC transporter substrate-binding protein compare
Atu4690 -4.7 -12.3 amino acid ABC transporter ATPase/permease compare
Atu4688 -4.6 -13.8 amino acid ABC transporter permease compare
Atu4689 -4.6 -11.9 amino acid ABC transporter permease compare
Atu2737 -4.5 -11.0 oxidoredutase compare
Atu4743 -3.8 -11.6 LacI family transcriptional regulator compare
Atu2614 -3.8 -10.1 hypothetical protein compare
Atu3616 -3.8 -13.3 hypothetical protein compare
Atu3226 -3.3 -10.4 GntR family transcriptional regulator compare
Atu1592 -3.2 -5.8 hypothetical protein compare
Atu4477 -3.2 -12.0 TetR family transcriptional regulator compare
Atu1285 -2.9 -9.0 metal dependent hydrolase compare
Atu4077 -2.8 -11.8 glycogen branching protein compare
Atu2174 -2.7 -10.1 hypothetical protein compare
Atu0098 -2.6 -14.7 mutT/nudix family protein compare
Atu3075 -2.3 -9.0 TetR family transcriptional regulator compare
Atu3505 -2.3 -10.1 3-hydroxyisobutyryl-CoA hydrolase compare
Atu3780 -2.2 -8.1 hypothetical protein compare
Atu0931 -2.2 -9.6 penicillin binding protein compare
Atu4364 -2.1 -9.8 LacI family transcriptional regulator compare
Atu3886 -1.9 -6.6 lysophospholipase compare
Atu4501 -1.9 -8.1 hypothetical protein compare
Atu3888 -1.9 -8.0 hypothetical protein compare
Atu0479 -1.9 -6.7 ABC transporter, substrate binding protein (amino acid) compare
Atu3779 -1.8 -7.8 lytic murein transglycosylase compare
Atu4530 -1.8 -7.6 TetR family transcriptional regulator compare
Atu0014 -1.8 -9.1 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
Atu1134 -1.7 -7.7 hypothetical protein compare
Atu1126 -1.7 -5.1 molybdopterin converting factor, large subunit compare
Atu2010 -1.6 -9.0 GGDEF family protein compare
Atu0328 -1.6 -8.4 heat-inducible transcription repressor compare
Atu0074 -1.6 -8.1 molybdopterin biosynthesis protein compare
Atu4160 -1.6 -5.1 RNA polymerase sigma factor compare
Atu4019 -1.6 -7.2 two component response regulator compare
Atu1578 -1.5 -7.2 ABC transporter, membrane spanning protein (amino acid) compare
Atu1690 -1.5 -7.0 molybdopterin biosynthesis protein compare
Atu2428 -1.5 -8.9 exopolysaccharide production protein PssB compare
Atu1695 -1.5 -9.4 molybdenum cofactor biosynthesis protein A compare
Atu2124 -1.4 -5.1 transcriptional regulator, ArsR family compare
Atu1380 -1.4 -6.7 zinc metallopeptidase compare
Atu2370 -1.4 -7.9 hypothetical protein compare
Atu2565 -1.4 -7.5 hypothetical protein compare
Atu2619 -1.3 -8.5 NAD-dependent formate dehydrogenase, C subunit protein compare
Atu1579 -1.3 -7.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu1522 -1.3 -7.1 transcriptional regulator, LacI family compare
Atu4705 -1.3 -5.2 LysR family transcriptional regulator compare
Atu2665 -1.3 -6.9 transcriptional regulator, MarR family compare
Atu4020 -1.2 -7.8 hypothetical protein compare
Atu1698 -1.1 -5.6 molybdopterin-guanine dinucleotide biosynthesis protein A compare
Atu2133 -1.1 -5.8 hypothetical protein compare
Atu1670 -1.1 -6.0 alcohol dehydrogenase class III compare
Atu0665 +1.0 7.4 glycolate oxidase subunit compare
Atu1086 +1.0 7.1 MFS permease compare
Atu4670 +1.1 5.8 hypothetical protein compare
Atu0667 +1.1 8.0 glycolate oxidase iron-sulfur subunit compare
Atu0897 +1.1 9.6 protease II compare
Atu0666 +1.2 6.5 glycolate oxidase subunit compare
Atu0132 +1.2 8.3 2-deoxyribose-5-phosphate aldolase compare
Atu2753 +1.3 5.9 ATP-dependent helicase compare
Atu1405 +1.3 6.2 transcriptional regulator, GntR family compare
Atu0786 +1.7 11.5 peptidase, family M16 compare
Atu4873 +1.9 9.7 TetR family transcriptional regulator compare
Atu0257 +2.3 17.9 hypothetical protein compare
Atu3532 +2.4 16.1 GntR family transcriptional regulator compare
Atu0996 +2.5 19.3 zinc-binding dehydrogenase compare
Atu0997 +2.5 13.0 hypothetical protein compare
Atu2739 +2.6 12.8 oxidoreductase compare
Atu4825 +3.1 19.6 dehydrogenase compare
Atu2740 +3.1 16.7 transcriptional regulator, GntR family compare
Atu3623 +3.4 23.6 DnaJ family molecular chaperone compare
Atu4824 +3.5 27.1 IclR family transcriptional regulator compare


Specific phenotypes for carbon source L-ascorbate across organisms