Experiment set2IT004 for Agrobacterium fabrum C58

Compare to:

L-ascorbate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Atu4691 -5.6 -13.8 2-hydroxyacid dehydrogenase compare
Atu4087 -5.2 -14.5 zinc-binding dehydrogenase compare
Atu1526 -5.0 -14.8 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu4086 -4.6 -13.1 gluconate 5-dehydrogenase compare
Atu0195 -4.2 -14.5 gluconokinase compare
Atu2737 -4.1 -11.5 oxidoredutase compare
Atu2614 -3.1 -11.9 hypothetical protein compare
Atu1592 -3.0 -6.8 hypothetical protein compare
Atu3616 -2.9 -10.5 hypothetical protein compare
Atu4077 -2.8 -15.0 glycogen branching protein compare
Atu2174 -2.5 -8.7 hypothetical protein compare
Atu4743 -2.3 -9.4 LacI family transcriptional regulator compare
Atu3226 -2.3 -8.3 GntR family transcriptional regulator compare
Atu4477 -2.3 -10.0 TetR family transcriptional regulator compare
Atu1285 -2.2 -9.4 metal dependent hydrolase compare
Atu4085 -2.1 -9.1 2-hydroxy-3-oxopropionate reductase compare
Atu0098 -2.0 -13.1 mutT/nudix family protein compare
Atu0479 -1.9 -8.0 ABC transporter, substrate binding protein (amino acid) compare
Atu4690 -1.9 -8.6 amino acid ABC transporter ATPase/permease compare
Atu4688 -1.8 -10.8 amino acid ABC transporter permease compare
Atu4689 -1.7 -7.1 amino acid ABC transporter permease compare
Atu0931 -1.7 -10.6 penicillin binding protein compare
Atu4687 -1.7 -9.3 amino acid ABC transporter substrate-binding protein compare
Atu3075 -1.7 -8.2 TetR family transcriptional regulator compare
Atu0328 -1.6 -8.1 heat-inducible transcription repressor compare
Atu3779 -1.6 -8.7 lytic murein transglycosylase compare
Atu4364 -1.5 -7.4 LacI family transcriptional regulator compare
Atu1380 -1.5 -7.2 zinc metallopeptidase compare
Atu2428 -1.5 -8.4 exopolysaccharide production protein PssB compare
Atu5443 -1.4 -5.3 TetR family transcriptional regulator compare
Atu2489 -1.4 -5.6 hypothetical protein compare
Atu0014 -1.4 -6.9 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
Atu2010 -1.3 -7.8 GGDEF family protein compare
Atu3369 -1.2 -5.1 hypothetical protein compare
Atu1522 -1.2 -7.2 transcriptional regulator, LacI family compare
Atu1134 -1.2 -7.2 hypothetical protein compare
Atu2665 -1.2 -7.8 transcriptional regulator, MarR family compare
Atu1126 -1.2 -5.4 molybdopterin converting factor, large subunit compare
Atu4030 -1.2 -5.8 sugar ABC transporter permease compare
Atu3888 -1.2 -6.7 hypothetical protein compare
Atu4033 -1.1 -6.7 sugar ABC transporter substrate-binding protein compare
Atu0631 -1.1 -6.0 molybdenum cofactor biosynthesis protein B compare
Atu0077 -1.1 -5.9 D-isomer specific 2-hydroxyacid dehydrogenases family protein compare
Atu1054 -1.1 -6.3 hypothetical protein compare
Atu2370 -1.0 -6.5 hypothetical protein compare
Atu0074 -1.0 -6.3 molybdopterin biosynthesis protein compare
Atu1100 -1.0 -5.9 hypothetical protein compare
Atu2069 -1.0 -5.3 hypothetical protein compare
Atu1130 +1.1 7.3 dehydrogenase compare
Atu4841 +1.2 8.6 DeoR family transcriptional regulator compare
Atu0105 +1.3 6.4 hypothetical protein compare
Atu0897 +1.3 11.2 protease II compare
Atu0257 +1.3 8.6 hypothetical protein compare
Atu0667 +1.4 11.7 glycolate oxidase iron-sulfur subunit compare
Atu1405 +1.5 9.8 transcriptional regulator, GntR family compare
Atu0665 +1.5 8.9 glycolate oxidase subunit compare
Atu1694 +1.5 8.1 hypothetical protein compare
Atu4641 +1.6 5.0 LysR family transcriptional regulator compare
Atu0666 +1.7 9.2 glycolate oxidase subunit compare
Atu2753 +1.8 6.6 ATP-dependent helicase compare
Atu0997 +1.8 7.7 hypothetical protein compare
Atu0996 +1.9 13.3 zinc-binding dehydrogenase compare
Atu3532 +2.4 17.1 GntR family transcriptional regulator compare
Atu2739 +2.6 10.7 oxidoreductase compare
Atu0786 +2.8 19.0 peptidase, family M16 compare
Atu3878 +3.3 26.3 transcriptional regulator compare
Atu3623 +3.6 16.2 DnaJ family molecular chaperone compare
Atu2740 +4.9 30.4 transcriptional regulator, GntR family compare


Specific phenotypes for carbon source L-ascorbate across organisms