Experiment set29S182 for Pseudomonas simiae WCS417

Compare to:

LB_noSalt with Sodium Chloride 1100 mM

200 most important genes:

  gene name fitness t score description  
PS417_24705 -5.3 -2.8 D-alanyl-D-alanine carboxypeptidase compare
PS417_05975 -4.0 -1.1 chemotaxis protein CheW compare
PS417_22565 -3.3 -0.9 formyltetrahydrofolate deformylase compare
PS417_16370 -3.2 -5.5 chemotaxis protein CheY compare
PS417_19560 -3.1 -12.1 amino acid ABC transporter substrate-binding protein compare
PS417_26990 -3.1 -1.2 RNA pyrophosphohydrolase compare
PS417_21515 -2.9 -13.1 transcriptional regulator compare
PS417_24885 -2.7 -4.4 transcriptional regulator compare
PS417_23380 -2.4 -4.4 cytochrome o ubiquinol oxidase subunit III compare
PS417_10720 -2.3 -2.8 chemotaxis protein CheY compare
PS417_11445 -2.2 -5.5 enoyl-CoA hydratase compare
PS417_02485 -2.2 -3.2 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_14785 -2.1 -11.0 glycine/betaine ABC transporter conserved
PS417_06375 -2.1 -0.5 deoxycytidine triphosphate deaminase compare
PS417_07120 -2.1 -3.2 RNA polymerase sigma-H factor compare
PS417_23025 -2.0 -7.2 murein transglycosylase compare
PS417_22250 -1.9 -4.9 pseudouridine synthase compare
PS417_11450 -1.9 -3.9 AraC family transcriptional regulator compare
PS417_06680 -1.9 -5.9 nuclease PIN compare
PS417_23385 -1.9 -9.9 cytochrome o ubiquinol oxidase subunit I compare
PS417_23770 -1.9 -1.1 exodeoxyribonuclease V subunit alpha compare
PS417_16005 -1.8 -5.7 ATPase compare
PS417_06365 -1.7 -7.1 RNA polymerase sigma factor compare
PS417_13800 -1.7 -3.7 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_00450 -1.7 -4.2 chemotaxis protein CheY compare
PS417_24835 -1.7 -7.2 hypothetical protein compare
PS417_00045 -1.7 -1.5 glycerol acyltransferase compare
PS417_27245 -1.7 -2.5 aminotransferase DegT compare
PS417_09580 -1.7 -3.0 tyrosyl-trna synthetase compare
PS417_03260 -1.6 -1.1 5S ribosomal RNA compare
PS417_10265 -1.6 -2.6 peptidase compare
PS417_04590 -1.6 -3.7 methyltransferase compare
PS417_08125 -1.6 -0.4 prephenate dehydratase compare
PS417_15095 -1.5 -2.8 hypothetical protein compare
PS417_03705 -1.5 -2.9 2-alkenal reductase compare
PS417_08230 -1.5 -2.6 lipopolysaccharide biosynthesis protein RfbH compare
PS417_15090 -1.5 -2.2 hypothetical protein compare
PS417_00405 -1.5 -6.7 DNA polymerase I compare
PS417_18545 -1.5 -3.1 cell division protein compare
PS417_23370 -1.5 -4.5 protoheme IX farnesyltransferase compare
PS417_25270 -1.4 -3.6 NrdR family transcriptional regulator compare
PS417_23375 -1.4 -3.0 cytochrome C oxidase compare
PS417_02980 -1.4 -1.9 chemotaxis protein compare
PS417_27795 -1.4 -0.3 orotate phosphoribosyltransferase compare
PS417_15885 -1.4 -1.7 GCN5 family acetyltransferase compare
PS417_23390 -1.4 -7.6 ubiquinol oxidase subunit II compare
PS417_04875 -1.4 -2.1 molybdenum cofactor biosynthesis protein MoaE compare
PS417_19295 -1.4 -6.1 hypothetical protein compare
PS417_04025 -1.4 -5.3 glycine/betaine ABC transporter permease conserved
PS417_26985 -1.4 -3.4 phosphoenolpyruvate-protein phosphotransferase compare
PS417_19235 -1.3 -6.9 GNAT family acetyltransferase compare
PS417_08685 -1.3 -1.5 flagellar hook-length control protein FliK compare
PS417_01620 -1.3 -2.7 preprotein translocase subunit SecB compare
PS417_07615 -1.3 -4.2 TetR family transcriptional regulator compare
PS417_04020 -1.3 -5.8 glycine/betaine ABC transporter substrate-binding protein conserved
PS417_27435 -1.3 -5.7 polyphosphate kinase compare
PS417_13795 -1.3 -5.5 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_19230 -1.3 -6.2 asparagine synthase compare
PS417_04010 -1.3 -5.8 glycine/betaine ABC transporter ATP-binding protein conserved
PS417_10645 -1.3 -9.4 magnesium ABC transporter ATPase compare
PS417_08185 -1.2 -5.0 glycosyl transferase compare
PS417_15715 -1.2 -5.8 nitrate reductase compare
PS417_00445 -1.2 -4.9 histidine kinase compare
PS417_12805 -1.2 -6.7 glycogen branching protein compare
PS417_05830 -1.2 -1.3 hypothetical protein compare
PS417_02280 -1.2 -1.1 GlcNAc-PI de-N-acetylase compare
PS417_07560 -1.2 -1.4 universal stress protein UspA compare
PS417_02885 -1.1 -1.3 hypothetical protein compare
PS417_24230 -1.1 -5.2 ATP-dependent protease compare
PS417_07140 -1.1 -1.1 peptidase M48 compare
PS417_15105 -1.1 -4.6 membrane protein compare
PS417_20030 -1.1 -3.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PS417_22520 -1.1 -1.2 histidine kinase compare
PS417_09695 -1.1 -1.0 hydrolase compare
PS417_20610 -1.1 -2.5 hypothetical protein compare
PS417_20855 -1.1 -1.0 hypothetical protein compare
PS417_08545 -1.0 -2.1 aromatic ring-opening dioxygenase LigB compare
PS417_13790 -1.0 -2.7 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PS417_20025 -1.0 -1.7 alpha-ribazole phosphatase compare
PS417_18930 -1.0 -2.0 restriction endonuclease subunit S compare
PS417_24615 -1.0 -0.7 hypothetical protein compare
PS417_05815 -1.0 -3.7 recombinase RecA compare
PS417_15710 -1.0 -1.9 nitrate reductase compare
PS417_24460 -1.0 -1.8 hypothetical protein compare
PS417_04015 -1.0 -3.2 choline ABC transporter permease conserved
PS417_02975 -1.0 -2.9 3-dehydroquinate dehydratase compare
PS417_27295 -0.9 -3.5 hypothetical protein compare
PS417_07440 -0.9 -2.4 cyclic nucleotide-binding protein compare
PS417_02225 -0.9 -1.7 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_00080 -0.9 -4.7 potassium transporter peripheral membrane component compare
PS417_19995 -0.9 -5.0 Long-chain fatty acid transport protein compare
PS417_17470 -0.9 -1.5 LuxR family transcriptional regulator compare
PS417_00085 -0.9 -2.0 16S rRNA methyltransferase compare
PS417_20915 -0.9 -1.5 hypothetical protein compare
PS417_24265 -0.9 -2.9 ABC transporter ATP-binding protein compare
PS417_05300 -0.9 -5.2 glucose dehydrogenase compare
PS417_23150 -0.9 -3.3 Cro/Cl family transcriptional regulator compare
PS417_04115 -0.9 -3.0 alpha/beta hydrolase compare
PS417_20160 -0.9 -3.4 cysteine synthase compare
PS417_20115 -0.9 -3.0 hypothetical protein compare
PS417_05500 -0.9 -1.8 2,3-diketo-5-methylthio-1-phosphopentane phosphatase compare
PS417_00455 -0.9 -1.2 hypothetical protein compare
PS417_23825 -0.9 -3.2 penicillin-binding protein compare
PS417_23820 -0.9 -4.3 hypothetical protein compare
PS417_11705 -0.9 -3.3 cyclic peptide transporter compare
PS417_15085 -0.9 -3.4 ATPase AAA compare
PS417_27640 -0.9 -0.9 TetR family transcriptional regulator compare
PS417_28050 -0.8 -1.3 hypothetical protein compare
PS417_15075 -0.8 -5.0 NAD-glutamate dehydrogenase compare
PS417_21425 -0.8 -1.3 4-amino-4-deoxychorismate lyase compare
PS417_13805 -0.8 -5.8 4-amino-4-deoxy-L-arabinose transferase compare
PS417_06835 -0.8 -1.3 phospholipase compare
PS417_13055 -0.8 -1.1 aminotransferase compare
PS417_21420 -0.8 -6.2 aminodeoxychorismate lyase compare
PS417_01605 -0.8 -0.8 phosphoglycerate mutase compare
PS417_26725 -0.8 -2.6 hypothetical protein compare
PS417_01580 -0.8 -1.2 imidazole glycerol phosphate synthase compare
PS417_20645 -0.8 -6.1 membrane protein compare
PS417_22810 -0.8 -2.2 DNA base-flipping protein YbaZ compare
PS417_15030 -0.8 -1.2 short-chain dehydrogenase compare
PS417_12740 -0.8 -2.7 secretion protein HlyD compare
PS417_02955 -0.8 -3.0 hypothetical protein compare
PS417_04865 -0.8 -2.0 molybdenum cofactor biosynthesis protein MoaC compare
PS417_21680 -0.8 -4.3 succinylglutamate desuccinylase compare
PS417_15805 -0.8 -1.7 transporter compare
PS417_18730 -0.8 -2.1 ABC transporter permease compare
PS417_18055 -0.8 -0.8 general secretion pathway protein GspK compare
PS417_22935 -0.8 -2.0 hypothetical protein compare
PS417_26155 -0.7 -2.0 hypothetical protein compare
PS417_08665 -0.7 -2.1 molybdopterin-guanine dinucleotide biosynthesis protein A compare
PS417_22015 -0.7 -1.6 hypothetical protein compare
PS417_08135 -0.7 -1.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_14115 -0.7 -3.1 molybdate ABC transporter substrate-binding protein compare
PS417_10370 -0.7 -2.0 ATPase compare
PS417_26290 -0.7 -1.5 4-hydroxybenzoyl-CoA thioesterase compare
PS417_25790 -0.7 -2.2 aminoglycoside phosphotransferase compare
PS417_23900 -0.7 -4.3 poly(A) polymerase compare
PS417_21015 -0.7 -1.5 EstX protein compare
PS417_04495 -0.7 -4.3 LITAF-like zinc ribbon domain containing protein compare
PS417_08365 -0.7 -1.0 hypothetical protein compare
PS417_13820 -0.7 -3.6 UDP-glucose 6-dehydrogenase compare
PS417_21830 -0.7 -1.7 TetR family transcriptional regulator compare
PS417_18100 -0.7 -2.1 iron ABC transporter compare
PS417_26570 -0.7 -4.4 hemolysin III compare
PS417_21270 -0.7 -1.4 translation initiation factor 2 compare
PS417_26345 -0.7 -2.5 choline dehydrogenase compare
PS417_10335 -0.7 -2.2 peroxiredoxin compare
PS417_20125 -0.7 -1.9 phosphoribosylglycinamide formyltransferase compare
PS417_08640 -0.7 -3.6 sodium:proton antiporter compare
PS417_26600 -0.7 -2.0 malonate decarboxylase subunit gamma compare
PS417_20050 -0.7 -3.3 cobalamin biosynthesis protein CobD compare
PS417_14505 -0.7 -3.6 glycogen debranching protein compare
PS417_13905 -0.7 -3.9 chemotaxis protein CheY compare
PS417_14480 -0.7 -5.2 glycogen synthase compare
PS417_24800 -0.7 -2.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PS417_12035 -0.7 -1.5 dihydroxyacetone kinase compare
PS417_06770 -0.7 -2.4 multidrug transporter compare
PS417_03560 -0.7 -0.7 GTP-binding protein compare
PS417_04595 -0.7 -1.1 cell division protein MraZ compare
PS417_15390 -0.7 -2.2 hypothetical protein compare
PS417_00525 -0.7 -5.2 hypothetical protein compare
PS417_28265 -0.7 -0.6 pyridoxamine kinase compare
PS417_22205 -0.7 -3.8 potassium transporter TrkH compare
PS417_27945 -0.7 -1.4 type VI secretion protein ImpA compare
PS417_20950 -0.7 -1.6 hypothetical protein compare
PS417_22410 -0.7 -2.6 hypothetical protein compare
PS417_16980 -0.7 -2.9 exonuclease III compare
PS417_10405 -0.7 -0.8 filamentous hemagglutinin compare
PS417_08190 -0.7 -5.4 membrane protein compare
PS417_26240 -0.7 -1.4 N-methylproline demethylase compare
PS417_19935 -0.7 -2.0 hypothetical protein compare
PS417_28080 -0.7 -4.8 phosphate ABC transporter permease compare
PS417_20235 -0.7 -3.1 hypothetical protein compare
PS417_08180 -0.7 -3.2 glycosyl transferase compare
PS417_08740 -0.7 -0.8 ribose-phosphate pyrophosphokinase compare
PS417_28070 -0.7 -3.1 phosphate ABC transporter ATP-binding protein compare
PS417_20980 -0.7 -3.5 uroporphyrin-III methyltransferase compare
PS417_05130 -0.6 -1.4 glutaredoxin compare
PS417_15725 -0.6 -1.6 nitrate/nitrite transporter NarK compare
PS417_23715 -0.6 -2.4 cupin compare
PS417_04435 -0.6 -4.0 uracil phosphoribosyltransferase compare
PS417_19275 -0.6 -1.1 hypothetical protein compare
PS417_27870 -0.6 -1.3 ATP-dependent DNA helicase RecG compare
PS417_07575 -0.6 -3.1 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_17680 -0.6 -1.7 ABC transporter compare
PS417_00925 -0.6 -0.9 hypothetical protein compare
PS417_09720 -0.6 -3.1 methyltransferase compare
PS417_24755 -0.6 -2.3 phosphoesterase compare
PS417_06675 -0.6 -1.7 ATP-dependent helicase compare
PS417_14710 -0.6 -1.2 isochorismatase compare
PS417_12520 -0.6 -2.1 hypothetical protein compare
PS417_14580 -0.6 -2.3 saccharopine dehydrogenase compare
PS417_14305 -0.6 -1.3 hydroxyproline-2-epimerase compare
PS417_09590 -0.6 -2.2 membrane protein compare
PS417_23080 -0.6 -2.1 sugar ABC transporter ATPase compare
PS417_07455 -0.6 -1.2 glutamine amidotransferase compare
PS417_21355 -0.6 -1.4 hypothetical protein compare
PS417_18225 -0.6 -2.6 phenol degradation protein meta compare
PS417_18690 -0.6 -1.9 aromatic amino acid aminotransferase compare
PS417_11640 -0.6 -2.2 GntR family transcriptional regulator compare


Specific Phenotypes

For 9 genes in this experiment

For stress Sodium Chloride in Pseudomonas simiae WCS417

For stress Sodium Chloride across organisms