Experiment set29S182 for Pseudomonas simiae WCS417

Compare to:

LB_noSalt with Sodium Chloride 1100 mM

200 most detrimental genes:

  gene name fitness t score description  
PS417_24935 +1.9 2.2 hypothetical protein compare
PS417_01395 +1.7 15.2 biofilm formation protein PelB compare
PS417_01420 +1.7 13.6 histidine kinase compare
PS417_19785 +1.7 5.5 flagellar biogenesis protein compare
PS417_01390 +1.6 11.6 PbsX family transcriptional regulator compare
PS417_01415 +1.6 12.4 glycosyl transferase family 1 compare
PS417_21565 +1.6 13.2 flagellar basal body rod protein FlgC compare
PS417_19825 +1.6 13.6 ATPase AAA compare
PS417_21555 +1.6 14.6 flagellar hook protein FlgE compare
PS417_01400 +1.6 6.3 hypothetical protein compare
PS417_27875 +1.5 10.4 histidine kinase compare
PS417_19790 +1.5 3.7 ATP synthase compare
PS417_21585 +1.5 12.3 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_21595 +1.5 10.1 flagellar biosynthesis protein FlgN compare
PS417_01410 +1.5 7.0 transporter compare
PS417_19745 +1.5 7.7 flagellar assembly protein FliO compare
PS417_21570 +1.5 13.4 flagellar basal body rod protein FlgB compare
PS417_19710 +1.4 12.5 flagellar biosynthesis protein FlhA compare
PS417_03465 +1.4 1.9 type III secretion protein compare
PS417_27300 +1.4 1.1 cell division protein ZapA compare
PS417_01405 +1.4 4.7 sugar transporter compare
PS417_19695 +1.4 8.9 flagellar biosynthesis sigma factor compare
PS417_19730 +1.3 9.0 flagellar biosynthesis protein FliR compare
PS417_19885 +1.3 8.8 flagellar basal body rod protein FlgG compare
PS417_21560 +1.3 4.4 flagellar basal body rod modification protein FlgD compare
PS417_19725 +1.3 8.5 flagellar biosynthesis protein FlhB compare
PS417_19740 +1.3 10.6 flagellar biosynthesis protein flip compare
PS417_19795 +1.3 11.4 flagellar assembly protein FliH compare
PS417_19865 +1.3 11.3 flagellar hook protein FlgK compare
PS417_19880 +1.2 8.7 flagellar basal body L-ring protein compare
PS417_19735 +1.2 9.6 flagellar biosynthesis protein FliQ compare
PS417_19805 +1.2 7.1 flagellar M-ring protein FliF compare
PS417_19860 +1.2 10.3 flagellar hook protein FlgL compare
PS417_19840 +1.2 8.2 flagellar cap protein FliD compare
PS417_28515 +1.1 3.2 16S rRNA methyltransferase compare
PS417_05635 +1.1 8.7 membrane protein compare
PS417_19765 +1.1 9.9 flagellar hook-length control protein compare
PS417_05990 +1.1 3.8 diguanylate cyclase compare
PS417_24710 +1.1 3.8 lipoprotein compare
PS417_19800 +1.1 6.8 flagellar motor switch protein FliG compare
PS417_19755 +1.1 4.2 flagellar motor switch protein FliM compare
PS417_14980 +1.0 1.6 universal stress protein UspA compare
PS417_15665 +1.0 1.5 hypothetical protein compare
PS417_24925 +1.0 5.3 hypothetical protein compare
PS417_11430 +1.0 5.8 EamA compare
PS417_04080 +1.0 2.9 peptide ABC transporter substrate-binding protein compare
PS417_07875 +1.0 1.7 hypothetical protein compare
PS417_11900 +1.0 7.7 conjugal transfer protein TraR compare
PS417_04180 +1.0 2.8 GntR family transcriptional regulator compare
PS417_14805 +1.0 1.6 AraC family transcriptional regulator compare
PS417_21630 +0.9 2.8 magnesium transporter compare
PS417_01280 +0.9 2.4 peptidoglycan-binding protein LysM compare
PS417_10060 +0.9 1.7 hypothetical protein compare
PS417_04585 +0.9 1.1 hypothetical protein compare
PS417_09915 +0.9 2.1 hypothetical protein compare
PS417_23315 +0.9 1.9 transcriptional regulator compare
PS417_19850 +0.9 6.1 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_15325 +0.9 1.6 type VI secretion protein compare
PS417_07890 +0.9 3.8 hypothetical protein compare
PS417_19830 +0.8 5.2 flagellar assembly protein FliT compare
PS417_13710 +0.8 2.7 hypothetical protein compare
PS417_24275 +0.8 6.8 diguanylate phosphodiesterase compare
PS417_07855 +0.8 3.1 hypothetical protein compare
PS417_24200 +0.8 3.5 GCN5 family acetyltransferase compare
PS417_01430 +0.8 2.6 chromosome segregation protein SMC compare
PS417_15255 +0.8 2.6 serine/threonine protein kinase compare
PS417_18885 +0.8 2.7 GntR family transcriptional regulator compare
PS417_15200 +0.8 1.4 protein activator of alkane oxidation PraB compare
PS417_25155 +0.8 2.1 hypothetical protein compare
PS417_09300 +0.8 3.3 peptidylprolyl isomerase compare
PS417_03785 +0.7 1.6 pilus assembly protein PilV compare
PS417_20485 +0.7 3.7 hypothetical protein compare
PS417_19835 +0.7 1.6 flagellar biosynthesis protein FliS compare
PS417_05610 +0.7 2.4 bacterioferritin compare
PS417_17945 +0.7 0.9 hypothetical protein compare
PS417_23095 +0.7 1.1 exodeoxyribonuclease compare
PS417_10135 +0.7 2.1 phage tail protein compare
PS417_07870 +0.7 2.6 hypothetical protein compare
PS417_04380 +0.7 0.4 ABC transporter permease compare
PS417_07700 +0.7 1.8 chromosome partitioning protein ParA compare
PS417_20415 +0.7 3.7 reverse transcriptase compare
PS417_01115 +0.7 1.4 serine acetyltransferase compare
PS417_11720 +0.7 3.5 class V aminotransferase compare
PS417_13755 +0.7 1.8 oxidoreductase compare
PS417_01440 +0.7 3.4 hypothetical protein compare
PS417_10095 +0.7 2.2 hypothetical protein compare
PS417_08130 +0.7 1.1 aspartate aminotransferase compare
PS417_02770 +0.7 2.5 membrane protein compare
PS417_16100 +0.7 1.9 antibiotic biosynthesis monooxygenase compare
PS417_25175 +0.7 1.7 hypothetical protein compare
PS417_23475 +0.7 1.5 hypothetical protein compare
PS417_19870 +0.7 1.7 flagellar rod assembly protein FlgJ compare
PS417_26335 +0.7 2.2 BetI family transcriptional regulator compare
PS417_24575 +0.7 1.3 hypothetical protein compare
PS417_05235 +0.7 1.7 peptidase inhibitor I42 compare
PS417_13490 +0.7 1.6 hypothetical protein compare
PS417_06045 +0.7 1.4 membrane protein compare
PS417_04535 +0.7 1.8 lysine transporter LysE compare
PS417_21335 +0.7 2.0 sugar ABC transporter substrate-binding protein compare
PS417_27555 +0.7 1.5 DNA-binding protein compare
PS417_13075 +0.6 1.5 hypothetical protein compare
PS417_00590 +0.6 2.2 5S ribosomal RNA compare
PS417_15820 +0.6 2.0 universal stress protein UspA compare
PS417_01435 +0.6 1.2 hypothetical protein compare
PS417_19285 +0.6 1.6 ankyrin compare
PS417_20375 +0.6 4.0 hypothetical protein compare
PS417_25160 +0.6 5.0 hypothetical protein compare
PS417_10740 +0.6 3.9 hypothetical protein compare
PS417_02805 +0.6 1.2 urease subunit gamma compare
PS417_09830 +0.6 4.2 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
PS417_17810 +0.6 2.4 microcin B17-processing protein McbB compare
PS417_15495 +0.6 1.0 FAD-dependent oxidoreductase compare
PS417_09200 +0.6 2.9 ABC transporter compare
PS417_00620 +0.6 2.7 GntR family transcriptional regulator compare
PS417_02440 +0.6 2.8 flagellar motor protein MotB compare
PS417_24840 +0.6 0.9 hypothetical protein compare
PS417_07765 +0.6 2.8 hypothetical protein compare
PS417_07885 +0.6 4.0 hypothetical protein compare
PS417_11950 +0.6 1.4 hypothetical protein compare
PS417_04650 +0.6 0.6 D-alanine--D-alanine ligase compare
PS417_03550 +0.6 2.6 hypothetical protein compare
PS417_11965 +0.6 2.0 GCN5 family acetyltransferase compare
PS417_03525 +0.6 1.4 hypothetical protein compare
PS417_27135 +0.6 0.6 glutamine synthetase compare
PS417_23050 +0.6 4.0 trehalose PTS system, EII-BC components TreB (from data) compare
PS417_05410 +0.6 2.0 membrane protein compare
PS417_20105 +0.6 5.7 glycosyl transferase compare
PS417_01855 +0.6 1.9 phosphoribosyl-AMP cyclohydrolase compare
PS417_19690 +0.6 2.7 histidine kinase compare
PS417_01425 +0.6 2.1 AraC family transcriptional regulator compare
PS417_15660 +0.6 3.3 hemerythrin compare
PS417_07920 +0.6 3.4 hypothetical protein compare
PS417_20715 +0.6 0.9 cytochrome Cbb3 compare
PS417_28035 +0.6 3.1 transcriptional regulator PhoB compare
PS417_18355 +0.6 3.6 DNA-binding protein compare
PS417_01445 +0.6 4.4 hypothetical protein compare
PS417_08050 +0.6 3.4 amino acid amidase compare
PS417_21795 +0.6 1.8 ABC transporter substrate-binding protein compare
PS417_03710 +0.6 2.3 metal-binding protein compare
PS417_01795 +0.6 4.5 glucosyltransferase MdoH compare
PS417_16555 +0.6 1.1 cupin compare
PS417_02255 +0.6 1.0 lipopolysaccharide kinase compare
PS417_07835 +0.6 4.3 hypothetical protein compare
PS417_04410 +0.6 1.6 hypothetical protein compare
PS417_10750 +0.6 3.4 hypothetical protein compare
PS417_07620 +0.6 0.5 beta-hexosaminidase compare
PS417_26730 +0.6 0.3 pyrroline-5-carboxylate reductase compare
PS417_05120 +0.6 1.6 RNA polymerase subunit sigma-24 compare
PS417_21575 +0.6 3.0 chemotaxis protein compare
PS417_26770 +0.6 1.1 tRNA (guanine-N7)-methyltransferase compare
PS417_00915 +0.6 1.2 aminotransferase compare
PS417_10745 +0.6 4.5 hypothetical protein compare
PS417_07760 +0.6 3.5 hypothetical protein compare
PS417_24915 +0.6 3.9 hypothetical protein compare
PS417_27705 +0.5 1.2 amino acid dehydrogenase compare
PS417_11520 +0.5 2.3 Sorbitol dehydrogenase (EC 1.1.1.14) (from data) compare
PS417_25035 +0.5 3.7 hypothetical protein compare
PS417_10040 +0.5 0.8 MFS transporter compare
PS417_24495 +0.5 1.2 NAD(FAD)-utilizing dehydrogenase compare
PS417_11710 +0.5 2.3 N(5)-hydroxyornithine transformylase PvdF compare
PS417_05155 +0.5 2.4 DNA polymerase III subunit chi compare
PS417_14165 +0.5 2.4 ArsR family transcriptional regulator compare
PS417_23105 +0.5 1.1 hypothetical protein compare
PS417_24180 +0.5 4.7 hypothetical protein compare
PS417_07850 +0.5 3.2 hypothetical protein compare
PS417_14065 +0.5 2.7 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_23005 +0.5 2.0 XRE family transcriptional regulator compare
PS417_24890 +0.5 2.8 transferase compare
PS417_12900 +0.5 1.5 Fe-S protein compare
PS417_20605 +0.5 4.1 hypothetical protein compare
PS417_12660 +0.5 1.5 hypothetical protein compare
PS417_06020 +0.5 2.2 membrane protein compare
PS417_19425 +0.5 0.7 allantoicase compare
PS417_24175 +0.5 3.5 hypothetical protein compare
PS417_15585 +0.5 1.6 DNA repair nucleotidyltransferase compare
PS417_02435 +0.5 3.3 flagellar motor protein MotA compare
PS417_23855 +0.5 1.3 ABC transporter substrate-binding protein compare
PS417_17610 +0.5 0.9 AsnC family transcriptional regulator compare
PS417_00830 +0.5 3.6 hypothetical protein compare
PS417_18020 +0.5 0.8 hypothetical protein compare
PS417_24190 +0.5 3.6 AraC family transcriptional regulator compare
PS417_09470 +0.5 0.9 hypothetical protein compare
PS417_07470 +0.5 1.3 hypothetical protein compare
PS417_24185 +0.5 1.5 hypothetical protein compare
PS417_24170 +0.5 4.8 cell division protein FtsK compare
PS417_13065 +0.5 1.8 UDP pyrophosphate phosphatase compare
PS417_07810 +0.5 3.8 hypothetical protein compare
PS417_22620 +0.5 1.4 pyruvate kinase compare
PS417_09975 +0.5 2.1 hypothetical protein compare
PS417_06145 +0.5 0.7 hypothetical protein compare
PS417_18000 +0.5 1.5 hypothetical protein compare
PS417_28530 +0.5 3.9 iron transporter compare
PS417_07130 +0.5 3.1 RNA polymerase sigma-H factor AlgU compare
PS417_05475 +0.5 1.6 arginase compare
PS417_03225 +0.5 2.0 thymidylate synthase compare
PS417_01790 +0.5 3.2 glucan biosynthesis protein G compare
PS417_10775 +0.5 3.0 hypothetical protein compare
PS417_21990 +0.5 1.1 LacI family transcriptional regulator compare
PS417_27220 +0.5 2.8 type II secretion system protein E compare
PS417_23735 +0.5 1.7 hypothetical protein compare


Specific Phenotypes

For 9 genes in this experiment

For stress Sodium Chloride in Pseudomonas simiae WCS417

For stress Sodium Chloride across organisms