Experiment set29S181 for Pseudomonas simiae WCS417

Compare to:

LB_noSalt with Sodium Chloride 500 mM

200 most important genes:

  gene name fitness t score description  
PS417_22565 -3.1 -1.0 formyltetrahydrofolate deformylase compare
PS417_24705 -2.8 -3.0 D-alanyl-D-alanine carboxypeptidase compare
PS417_08185 -2.7 -7.0 glycosyl transferase compare
PS417_05975 -2.7 -1.2 chemotaxis protein CheW compare
PS417_16490 -2.6 -1.6 cell division protein FtsK compare
PS417_08190 -2.6 -19.5 membrane protein compare
PS417_13800 -2.1 -5.2 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_08220 -2.1 -2.3 epimerase compare
PS417_21515 -2.0 -13.0 transcriptional regulator compare
PS417_15105 -1.9 -8.5 membrane protein compare
PS417_08245 -1.9 -2.9 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_15095 -1.9 -5.1 hypothetical protein compare
PS417_13820 -1.8 -9.5 UDP-glucose 6-dehydrogenase compare
PS417_00370 -1.8 -2.0 hypothetical protein compare
PS417_23025 -1.8 -8.1 murein transglycosylase compare
PS417_24835 -1.7 -11.6 hypothetical protein compare
PS417_08230 -1.7 -5.0 lipopolysaccharide biosynthesis protein RfbH compare
PS417_08090 -1.7 -1.2 3-oxoacyl-ACP reductase compare
PS417_23825 -1.7 -7.2 penicillin-binding protein compare
PS417_13795 -1.6 -7.2 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_27135 -1.5 -1.0 glutamine synthetase compare
PS417_08195 -1.5 -10.7 hypothetical protein compare
PS417_21655 -1.5 -1.6 aspartate kinase compare
PS417_15110 -1.5 -5.4 protein BatD compare
PS417_20670 -1.5 -8.9 glycosyl transferase family 2 compare
PS417_15100 -1.5 -3.3 BatB protein compare
PS417_08225 -1.5 -8.6 acetolactate synthase compare
PS417_23770 -1.5 -0.9 exodeoxyribonuclease V subunit alpha compare
PS417_20610 -1.4 -3.2 hypothetical protein compare
PS417_08205 -1.4 -7.6 acetyltransferase compare
PS417_13790 -1.4 -4.9 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PS417_01600 -1.4 -4.6 peptidase M23 compare
PS417_10720 -1.4 -3.3 chemotaxis protein CheY compare
PS417_21625 -1.3 -1.7 DNA-binding protein compare
PS417_20650 -1.3 -9.2 hypothetical protein compare
PS417_20660 -1.3 -7.9 hypothetical protein compare
PS417_00535 -1.3 -2.1 Holliday junction resolvase compare
PS417_18545 -1.3 -3.0 cell division protein compare
PS417_23820 -1.3 -5.7 hypothetical protein compare
PS417_02475 -1.3 -1.8 N-acetylmuramoyl-L-alanine amidase compare
PS417_01095 -1.3 -2.3 amino acid ABC transporter ATP-binding protein compare
PS417_00525 -1.3 -10.1 hypothetical protein compare
PS417_04020 -1.2 -7.4 glycine/betaine ABC transporter substrate-binding protein conserved
PS417_04595 -1.2 -1.9 cell division protein MraZ compare
PS417_07560 -1.2 -1.6 universal stress protein UspA compare
PS417_05830 -1.2 -1.7 hypothetical protein compare
PS417_27040 -1.1 -2.4 3-phosphoglycerate dehydrogenase compare
PS417_15090 -1.1 -1.3 hypothetical protein compare
PS417_27795 -1.1 -0.3 orotate phosphoribosyltransferase compare
PS417_04545 -1.1 -9.6 hypothetical protein compare
PS417_00045 -1.1 -1.3 glycerol acyltransferase compare
PS417_04010 -1.1 -6.5 glycine/betaine ABC transporter ATP-binding protein conserved
PS417_13805 -1.1 -6.3 4-amino-4-deoxy-L-arabinose transferase compare
PS417_20655 -1.1 -7.2 group 1 glycosyl transferase compare
PS417_04025 -1.1 -5.7 glycine/betaine ABC transporter permease conserved
PS417_26800 -1.0 -5.5 cell division protein FtsX compare
PS417_00405 -1.0 -5.9 DNA polymerase I compare
PS417_13510 -1.0 -1.4 polyketide cyclase compare
PS417_22410 -1.0 -5.1 hypothetical protein compare
PS417_04015 -1.0 -4.6 choline ABC transporter permease conserved
PS417_08200 -1.0 -2.7 hypothetical protein compare
PS417_02720 -1.0 -1.2 TetR family transcriptional regulator compare
PS417_00920 -1.0 -3.3 diguanylate cyclase compare
PS417_21125 -1.0 -7.3 phosphoadenosine phosphosulfate reductase compare
PS417_04475 -1.0 -3.6 hypothetical protein compare
PS417_10265 -0.9 -2.3 peptidase compare
PS417_02485 -0.9 -2.1 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_20645 -0.9 -6.9 membrane protein compare
PS417_02975 -0.9 -2.0 3-dehydroquinate dehydratase compare
PS417_16555 -0.8 -1.2 cupin compare
PS417_15085 -0.8 -2.2 ATPase AAA compare
PS417_03260 -0.8 -0.8 5S ribosomal RNA compare
PS417_10405 -0.8 -1.1 filamentous hemagglutinin compare
PS417_06245 -0.8 -1.0 zinc metallopeptidase RseP compare
PS417_22300 -0.8 -1.5 LTXXQ domain protein compare
PS417_12110 -0.8 -1.8 ATP-binding protein compare
PS417_08165 -0.8 -5.1 UDP-glucose 4-epimerase compare
PS417_05785 -0.8 -3.1 tail protein compare
PS417_20665 -0.7 -3.3 hypothetical protein compare
PS417_25270 -0.7 -2.3 NrdR family transcriptional regulator compare
PS417_24230 -0.7 -4.0 ATP-dependent protease compare
PS417_07985 -0.7 -1.6 AbrB family transcriptional regulator compare
PS417_21850 -0.7 -1.3 LysR family transcriptional regulator compare
PS417_14835 -0.7 -3.3 amidase compare
PS417_17645 -0.7 -1.5 RND transporter compare
PS417_21680 -0.7 -2.8 succinylglutamate desuccinylase compare
PS417_03115 -0.7 -2.5 pilus assembly protein compare
PS417_27195 -0.7 -0.9 N-acetylglutamate synthase compare
PS417_02895 -0.7 -1.7 precorrin-6Y C5,15-methyltransferase compare
PS417_08180 -0.7 -4.2 glycosyl transferase compare
PS417_27585 -0.7 -1.1 diaminopimelate epimerase compare
PS417_09580 -0.7 -1.9 tyrosyl-trna synthetase compare
PS417_20840 -0.7 -4.1 hypothetical protein compare
PS417_02280 -0.7 -0.9 GlcNAc-PI de-N-acetylase compare
PS417_07275 -0.7 -2.7 5-carboxymethyl-2-hydroxymuconate isomerase compare
PS417_26985 -0.7 -2.9 phosphoenolpyruvate-protein phosphotransferase compare
PS417_28265 -0.7 -0.9 pyridoxamine kinase compare
PS417_12595 -0.7 -1.5 transcriptional regulator compare
PS417_15715 -0.7 -3.7 nitrate reductase compare
PS417_15530 -0.7 -3.2 ribonuclease compare
PS417_16370 -0.7 -3.1 chemotaxis protein CheY compare
PS417_23160 -0.6 -1.9 50S rRNA methyltransferase compare
PS417_08155 -0.6 -0.6 integration host factor subunit beta compare
PS417_22450 -0.6 -0.6 ATP-dependent DNA helicase RuvA compare
PS417_00450 -0.6 -2.9 chemotaxis protein CheY compare
PS417_27245 -0.6 -1.6 aminotransferase DegT compare
PS417_20030 -0.6 -1.9 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PS417_21430 -0.6 -0.8 3-oxoacyl-ACP synthase compare
PS417_26420 -0.6 -1.2 hypothetical protein compare
PS417_17785 -0.6 -4.5 4-amino-4-deoxy-L-arabinose transferase compare
PS417_08730 -0.6 -1.5 cytochrome C compare
PS417_03705 -0.6 -2.5 2-alkenal reductase compare
PS417_06775 -0.6 -1.5 antibiotic transporter compare
PS417_19995 -0.6 -3.8 Long-chain fatty acid transport protein compare
PS417_13580 -0.6 -1.4 AraC family transcriptional regulator compare
PS417_00385 -0.6 -0.6 Fur family transcriptional regulator compare
PS417_14940 -0.6 -1.4 LysR family transcriptional regulator compare
PS417_13625 -0.6 -2.0 cytochrome B561 compare
PS417_01195 -0.6 -1.6 RNA-binding protein S4 compare
PS417_04875 -0.6 -1.1 molybdenum cofactor biosynthesis protein MoaE compare
PS417_21510 -0.6 -0.6 histidine kinase compare
PS417_00085 -0.6 -1.5 16S rRNA methyltransferase compare
PS417_14115 -0.6 -2.9 molybdate ABC transporter substrate-binding protein compare
PS417_14590 -0.6 -1.6 LysR family transcriptional regulator compare
PS417_05775 -0.6 -1.8 tail tape measure protein compare
PS417_07120 -0.6 -2.2 RNA polymerase sigma-H factor compare
PS417_13870 -0.6 -2.1 hypothetical protein compare
PS417_02270 -0.6 -1.9 carbamoyltransferase compare
PS417_26990 -0.6 -0.5 RNA pyrophosphohydrolase compare
PS417_27595 -0.6 -1.3 recombinase XerC compare
PS417_20025 -0.6 -1.1 alpha-ribazole phosphatase compare
PS417_10320 -0.5 -2.2 hypothetical protein compare
PS417_04590 -0.5 -2.3 methyltransferase compare
PS417_23360 -0.5 -0.9 hypothetical protein compare
PS417_14295 -0.5 -2.0 AraC family transcriptional regulator compare
PS417_00945 -0.5 -2.0 sulfate ABC transporter ATP-binding protein compare
PS417_09590 -0.5 -3.0 membrane protein compare
PS417_15465 -0.5 -2.7 carboxynorspermidine decarboxylase compare
PS417_25380 -0.5 -2.3 hypothetical protein compare
PS417_07640 -0.5 -2.1 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_16160 -0.5 -1.2 ABC transporter substrate-binding protein compare
PS417_15710 -0.5 -1.7 nitrate reductase compare
PS417_13240 -0.5 -2.1 siderophore biosynthesis protein compare
PS417_28070 -0.5 -2.7 phosphate ABC transporter ATP-binding protein compare
PS417_20050 -0.5 -3.6 cobalamin biosynthesis protein CobD compare
PS417_25765 -0.5 -1.3 transcriptional regulator compare
PS417_01620 -0.5 -1.6 preprotein translocase subunit SecB compare
PS417_24555 -0.5 -2.6 polyribonucleotide nucleotidyltransferase compare
PS417_09625 -0.5 -1.5 sugar ABC transporter substrate-binding protein compare
PS417_02780 -0.5 -2.3 DNA-binding protein compare
PS417_20160 -0.5 -2.9 cysteine synthase compare
PS417_16180 -0.5 -1.8 MFS transporter compare
PS417_16920 -0.5 -1.8 multidrug RND transporter compare
PS417_05840 -0.5 -2.5 LuxR family transcriptional regulator compare
PS417_16050 -0.5 -1.7 energy transducer TonB compare
PS417_07470 -0.5 -1.0 hypothetical protein compare
PS417_10665 -0.5 -1.6 hypothetical protein compare
PS417_24885 -0.5 -1.7 transcriptional regulator compare
PS417_07755 -0.5 -3.3 hypothetical protein compare
PS417_16870 -0.5 -1.9 short-chain dehydrogenase compare
PS417_10040 -0.5 -0.7 MFS transporter compare
PS417_05220 -0.5 -2.6 tRNA methyltransferase compare
PS417_23575 -0.5 -1.6 hypothetical protein compare
PS417_04650 -0.5 -0.4 D-alanine--D-alanine ligase compare
PS417_00475 -0.5 -2.1 membrane protein compare
PS417_08250 -0.5 -1.4 competence protein ComEA compare
PS417_22740 -0.5 -3.6 imelysin compare
PS417_23505 -0.5 -1.3 cell division protein DedD compare
PS417_10910 -0.5 -1.9 FAD-dependent oxidoreductase compare
PS417_21480 -0.5 -0.7 23S rRNA pseudouridylate synthase compare
PS417_27815 -0.5 -0.9 hypothetical protein compare
PS417_10210 -0.5 -2.4 hypothetical protein compare
PS417_02225 -0.5 -0.7 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_17470 -0.5 -1.6 LuxR family transcriptional regulator compare
PS417_13055 -0.5 -1.2 aminotransferase compare
PS417_28275 -0.5 -1.4 cobalamin biosynthesis protein CobW compare
PS417_20235 -0.5 -2.9 hypothetical protein compare
PS417_19650 -0.5 -1.8 chemotaxis protein CheW compare
PS417_27110 -0.5 -1.6 spermidine/putrescine ABC transporter permease compare
PS417_20635 -0.5 -0.9 ABC transporter ATP-binding protein compare
PS417_02405 -0.5 -2.2 hypothetical protein compare
PS417_02910 -0.5 -2.6 precorrin-2 C20-methyltransferase compare
PS417_11380 -0.5 -2.0 peptidylprolyl isomerase compare
PS417_21900 -0.5 -2.2 allophanate hydrolase compare
PS417_12805 -0.5 -3.3 glycogen branching protein compare
PS417_10920 -0.5 -1.9 LysR family transcriptional regulator compare
PS417_19275 -0.5 -0.9 hypothetical protein compare
PS417_20585 -0.5 -2.9 chemotaxis protein compare
PS417_08665 -0.5 -1.4 molybdopterin-guanine dinucleotide biosynthesis protein A compare
PS417_10710 -0.5 -1.0 GNAT family acetyltransferase compare
PS417_24600 -0.5 -2.6 hydrogenase compare
PS417_02725 -0.4 -0.6 hypothetical protein compare
PS417_23815 -0.4 -1.9 pseudouridine synthase compare
PS417_14050 -0.4 -1.4 recombinase compare
PS417_08930 -0.4 -2.2 hypothetical protein compare
PS417_17640 -0.4 -3.4 macrolide ABC transporter ATP-binding protein compare
PS417_26530 -0.4 -0.8 hypothetical protein compare
PS417_04305 -0.4 -0.7 aspartate ammonia-lyase compare
PS417_22270 -0.4 -1.5 hypothetical protein compare
PS417_27305 -0.4 -2.1 5-formyltetrahydrofolate cyclo-ligase compare


Specific Phenotypes

For 4 genes in this experiment

For stress Sodium Chloride in Pseudomonas simiae WCS417

For stress Sodium Chloride across organisms