Experiment set29S133 for Pseudomonas simiae WCS417

Compare to:

LB_noSalt with Sodium Chloride 500 mM

200 most important genes:

  gene name fitness t score description  
PS417_05975 -3.8 -1.1 chemotaxis protein CheW compare
PS417_08185 -2.6 -8.0 glycosyl transferase compare
PS417_21515 -2.3 -17.9 transcriptional regulator compare
PS417_22565 -1.9 -0.7 formyltetrahydrofolate deformylase compare
PS417_08190 -1.9 -13.8 membrane protein compare
PS417_13795 -1.8 -8.8 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_13820 -1.8 -8.5 UDP-glucose 6-dehydrogenase compare
PS417_27040 -1.7 -2.8 3-phosphoglycerate dehydrogenase compare
PS417_16490 -1.7 -1.3 cell division protein FtsK compare
PS417_15530 -1.7 -9.5 ribonuclease compare
PS417_08245 -1.6 -2.4 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_24835 -1.5 -6.5 hypothetical protein compare
PS417_18420 -1.5 -3.6 deoxyribonuclease compare
PS417_02475 -1.4 -3.1 N-acetylmuramoyl-L-alanine amidase compare
PS417_23825 -1.4 -7.1 penicillin-binding protein compare
PS417_08205 -1.4 -6.0 acetyltransferase compare
PS417_23950 -1.3 -0.8 polynucleotide phosphorylase/polyadenylase compare
PS417_26730 -1.3 -0.7 pyrroline-5-carboxylate reductase compare
PS417_08220 -1.3 -1.6 epimerase compare
PS417_01095 -1.3 -1.7 amino acid ABC transporter ATP-binding protein compare
PS417_27245 -1.3 -2.4 aminotransferase DegT compare
PS417_24705 -1.3 -2.2 D-alanyl-D-alanine carboxypeptidase compare
PS417_08200 -1.2 -5.5 hypothetical protein compare
PS417_15095 -1.2 -2.3 hypothetical protein compare
PS417_24615 -1.2 -0.7 hypothetical protein compare
PS417_23820 -1.2 -5.1 hypothetical protein compare
PS417_27795 -1.2 -0.3 orotate phosphoribosyltransferase compare
PS417_10720 -1.2 -4.9 chemotaxis protein CheY compare
PS417_00045 -1.2 -1.2 glycerol acyltransferase compare
PS417_08225 -1.2 -5.0 acetolactate synthase compare
PS417_04650 -1.2 -0.6 D-alanine--D-alanine ligase compare
PS417_04020 -1.1 -6.8 glycine/betaine ABC transporter substrate-binding protein conserved
PS417_08195 -1.1 -6.9 hypothetical protein compare
PS417_13800 -1.1 -2.2 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_06680 -1.1 -3.6 nuclease PIN compare
PS417_08230 -1.1 -3.0 lipopolysaccharide biosynthesis protein RfbH compare
PS417_15110 -1.1 -4.6 protein BatD compare
PS417_04025 -1.1 -6.8 glycine/betaine ABC transporter permease conserved
PS417_13805 -1.1 -5.7 4-amino-4-deoxy-L-arabinose transferase compare
PS417_26990 -1.0 -0.8 RNA pyrophosphohydrolase compare
PS417_13790 -1.0 -2.4 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PS417_21625 -1.0 -1.3 DNA-binding protein compare
PS417_15090 -1.0 -1.8 hypothetical protein compare
PS417_21125 -1.0 -5.6 phosphoadenosine phosphosulfate reductase compare
PS417_04010 -1.0 -4.0 glycine/betaine ABC transporter ATP-binding protein conserved
PS417_23025 -1.0 -5.6 murein transglycosylase compare
PS417_15705 -0.9 -2.5 nitrate reductase compare
PS417_23770 -0.9 -0.8 exodeoxyribonuclease V subunit alpha compare
PS417_02415 -0.9 -3.1 phosphoserine phosphatase compare
PS417_20610 -0.9 -2.1 hypothetical protein compare
PS417_05830 -0.9 -1.7 hypothetical protein compare
PS417_20660 -0.9 -5.7 hypothetical protein compare
PS417_05785 -0.9 -2.5 tail protein compare
PS417_00405 -0.9 -5.6 DNA polymerase I compare
PS417_08540 -0.9 -1.4 RNA helicase compare
PS417_20670 -0.9 -5.6 glycosyl transferase family 2 compare
PS417_04015 -0.9 -3.3 choline ABC transporter permease conserved
PS417_24230 -0.8 -4.2 ATP-dependent protease compare
PS417_09140 -0.8 -2.4 biopolymer transporter ExbB compare
PS417_10405 -0.8 -1.0 filamentous hemagglutinin compare
PS417_17240 -0.8 -1.4 trigger factor compare
PS417_04475 -0.8 -2.6 hypothetical protein compare
PS417_21680 -0.8 -2.9 succinylglutamate desuccinylase compare
PS417_27705 -0.8 -1.4 amino acid dehydrogenase compare
PS417_18860 -0.8 -3.7 transcriptional regulator compare
PS417_00175 -0.8 -1.1 CigR compare
PS417_03260 -0.8 -0.6 5S ribosomal RNA compare
PS417_22410 -0.8 -3.9 hypothetical protein compare
PS417_17785 -0.8 -5.9 4-amino-4-deoxy-L-arabinose transferase compare
PS417_02280 -0.8 -1.0 GlcNAc-PI de-N-acetylase compare
PS417_15105 -0.8 -3.7 membrane protein compare
PS417_17490 -0.8 -1.9 ABC transporter ATP-binding protein compare
PS417_10095 -0.8 -1.2 hypothetical protein compare
PS417_00370 -0.8 -1.0 hypothetical protein compare
PS417_13510 -0.8 -1.0 polyketide cyclase compare
PS417_02980 -0.8 -1.2 chemotaxis protein compare
PS417_01620 -0.7 -2.0 preprotein translocase subunit SecB compare
PS417_02720 -0.7 -0.9 TetR family transcriptional regulator compare
PS417_27490 -0.7 -1.7 hypothetical protein compare
PS417_10265 -0.7 -1.6 peptidase compare
PS417_23160 -0.7 -2.1 50S rRNA methyltransferase compare
PS417_00180 -0.7 -1.2 tryptophan synthase subunit alpha compare
PS417_00525 -0.7 -5.1 hypothetical protein compare
PS417_23580 -0.7 -1.3 peptidylprolyl isomerase compare
PS417_20840 -0.7 -4.7 hypothetical protein compare
PS417_02270 -0.7 -1.7 carbamoyltransferase compare
PS417_00535 -0.7 -1.5 Holliday junction resolvase compare
PS417_20645 -0.7 -5.3 membrane protein compare
PS417_12335 -0.7 -2.3 cobalt transporter compare
PS417_15710 -0.7 -1.7 nitrate reductase compare
PS417_05695 -0.7 -3.0 transcriptional regulator compare
PS417_24370 -0.7 -0.7 (2Fe-2S)-binding protein compare
PS417_20655 -0.7 -4.9 group 1 glycosyl transferase compare
PS417_27870 -0.7 -1.7 ATP-dependent DNA helicase RecG compare
PS417_17930 -0.7 -2.3 aldehyde dehydrogenase compare
PS417_02910 -0.7 -4.0 precorrin-2 C20-methyltransferase compare
PS417_20650 -0.7 -3.9 hypothetical protein compare
PS417_05790 -0.7 -3.0 hypothetical protein compare
PS417_27155 -0.7 -0.9 aliphatic sulfonates transport ATP-binding subunit compare
PS417_04545 -0.7 -5.4 hypothetical protein compare
PS417_16715 -0.7 -1.2 DoxX family protein compare
PS417_22840 -0.7 -1.0 tRNA-Met compare
PS417_20635 -0.7 -1.1 ABC transporter ATP-binding protein compare
PS417_00455 -0.7 -1.4 hypothetical protein compare
PS417_23380 -0.7 -2.2 cytochrome o ubiquinol oxidase subunit III compare
PS417_20160 -0.7 -2.9 cysteine synthase compare
PS417_14515 -0.6 -1.2 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_08180 -0.6 -4.6 glycosyl transferase compare
PS417_02560 -0.6 -1.2 23S rRNA methyltransferase compare
PS417_24125 -0.6 -2.9 hypothetical protein compare
PS417_03705 -0.6 -2.1 2-alkenal reductase compare
PS417_15085 -0.6 -2.3 ATPase AAA compare
PS417_05985 -0.6 -2.0 chemotaxis protein CheY compare
PS417_00920 -0.6 -2.1 diguanylate cyclase compare
PS417_12380 -0.6 -2.8 peptidase S54 compare
PS417_16310 -0.6 -2.1 membrane protein compare
PS417_27665 -0.6 -3.5 diguanylate cyclase compare
PS417_17980 -0.6 -1.4 ABC transporter permease compare
PS417_07120 -0.6 -2.1 RNA polymerase sigma-H factor compare
PS417_02405 -0.6 -2.8 hypothetical protein compare
PS417_04435 -0.6 -3.6 uracil phosphoribosyltransferase compare
PS417_15715 -0.6 -3.4 nitrate reductase compare
PS417_06355 -0.6 -1.9 protein-L-isoaspartate O-methyltransferase compare
PS417_18690 -0.6 -1.9 aromatic amino acid aminotransferase compare
PS417_19995 -0.6 -4.2 Long-chain fatty acid transport protein compare
PS417_05760 -0.6 -3.2 phage tail protein compare
PS417_17675 -0.6 -1.2 ABC transporter compare
PS417_07575 -0.6 -2.3 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_20035 -0.6 -3.7 adenosylcobinamide kinase compare
PS417_02110 -0.6 -1.3 acyl carrier protein compare
PS417_23545 -0.6 -1.2 gamma-glutamyl kinase compare
PS417_14940 -0.6 -1.1 LysR family transcriptional regulator compare
PS417_24115 -0.6 -1.4 hypothetical protein compare
PS417_08155 -0.6 -0.6 integration host factor subunit beta compare
PS417_26535 -0.6 -2.7 cytochrome B561 compare
PS417_15100 -0.6 -1.1 BatB protein compare
PS417_03430 -0.6 -2.4 methyltransferase type 11 compare
PS417_19505 -0.6 -1.5 2,4-diaminobutyrate 4-aminotransferase compare
PS417_15410 -0.6 -1.5 hypothetical protein compare
PS417_16185 -0.5 -1.8 hypothetical protein compare
PS417_15520 -0.5 -2.2 hypothetical protein compare
PS417_06335 -0.5 -2.1 S-formylglutathione hydrolase compare
PS417_27290 -0.5 -1.3 hypothetical protein compare
PS417_21630 -0.5 -1.2 magnesium transporter compare
PS417_02780 -0.5 -3.0 DNA-binding protein compare
PS417_23370 -0.5 -2.7 protoheme IX farnesyltransferase compare
PS417_23375 -0.5 -1.5 cytochrome C oxidase compare
PS417_09235 -0.5 -0.6 molecular chaperone compare
PS417_01600 -0.5 -2.7 peptidase M23 compare
PS417_12015 -0.5 -1.9 phosphoglycerate mutase compare
PS417_21850 -0.5 -0.9 LysR family transcriptional regulator compare
PS417_06125 -0.5 -1.9 hypothetical protein compare
PS417_22270 -0.5 -1.5 hypothetical protein compare
PS417_02070 -0.5 -0.7 membrane protein compare
PS417_14880 -0.5 -1.6 thioesterase compare
PS417_20340 -0.5 -1.6 hypothetical protein compare
PS417_00945 -0.5 -2.3 sulfate ABC transporter ATP-binding protein compare
PS417_16855 -0.5 -1.2 cation:proton antiporter compare
PS417_25645 -0.5 -1.9 peptidase M23 compare
PS417_14210 -0.5 -2.0 hypothetical protein compare
PS417_21140 -0.5 -2.5 LysR family transcriptional regulator compare
PS417_17415 -0.5 -2.0 histidine kinase compare
PS417_24270 -0.5 -2.6 threonine transporter RhtB compare
PS417_23815 -0.5 -2.1 pseudouridine synthase compare
PS417_26280 -0.5 -1.5 NADPH:quinone reductase compare
PS417_24400 -0.5 -2.5 peptidase compare
PS417_24650 -0.5 -1.3 membrane protein compare
PS417_08580 -0.5 -2.9 histidine kinase compare
PS417_13855 -0.5 -0.7 acetyl-CoA acetyltransferase compare
PS417_13580 -0.5 -1.4 AraC family transcriptional regulator compare
PS417_04875 -0.5 -0.9 molybdenum cofactor biosynthesis protein MoaE compare
PS417_20945 -0.5 -2.3 transcriptional regulator compare
PS417_06775 -0.5 -1.3 antibiotic transporter compare
PS417_14065 -0.5 -3.3 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_07620 -0.5 -0.3 beta-hexosaminidase compare
PS417_16665 -0.5 -1.0 hypothetical protein compare
PS417_24500 -0.5 -1.7 DEAD/DEAH box helicase compare
PS417_04945 -0.5 -2.5 fimbrial chaperone protein compare
PS417_08845 -0.5 -2.3 hypothetical protein compare
PS417_11760 -0.5 -1.7 Fis family transcriptional regulator compare
PS417_13640 -0.5 -1.4 ribose ABC transporter permease compare
PS417_12655 -0.5 -2.0 methionine aminopeptidase compare
PS417_08165 -0.5 -3.1 UDP-glucose 4-epimerase compare
PS417_08025 -0.5 -0.8 acetylornithine aminotransferase compare
PS417_01130 -0.5 -1.6 L-glyceraldehyde 3-phosphate reductase compare
PS417_20915 -0.5 -1.3 hypothetical protein compare
PS417_25225 -0.5 -1.2 MFS transporter compare
PS417_23830 -0.5 -3.9 hypothetical protein compare
PS417_08665 -0.5 -1.5 molybdopterin-guanine dinucleotide biosynthesis protein A compare
PS417_08685 -0.5 -0.8 flagellar hook-length control protein FliK compare
PS417_26340 -0.5 -2.4 betaine-aldehyde dehydrogenase compare
PS417_19360 -0.5 -1.4 hypothetical protein compare
PS417_18545 -0.5 -0.9 cell division protein compare
PS417_23475 -0.4 -0.8 hypothetical protein compare
PS417_18055 -0.4 -0.8 general secretion pathway protein GspK compare
PS417_20885 -0.4 -2.6 Xanthine dehydrogenase (EC 1.17.1.4) (from data) compare
PS417_19610 -0.4 -1.3 molybdenum cofactor sulfurase compare
PS417_14540 -0.4 -0.9 cytochrome C oxidase subunit III compare
PS417_15065 -0.4 -1.4 GntR family transcriptional regulator compare
PS417_02865 -0.4 -1.8 peptidase compare


Specific Phenotypes

For 2 genes in this experiment

For stress Sodium Chloride in Pseudomonas simiae WCS417

For stress Sodium Chloride across organisms