Experiment set29IT005 for Pseudomonas putida KT2440

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Propandiamine nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_0596 -6.3 -6.2 Omega-amino acid--pyruvate aminotransferase compare
PP_2932 -6.1 -10.2 Amidase family protein compare
PP_4547 -5.9 -5.8 putative Glutamine synthetase compare
PP_0567 -5.6 -10.8 Biosynthetic arginine decarboxylase compare
PP_4548 -5.5 -11.1 putative Oxidoreductase compare
PP_0266 -5.3 -10.7 Agmatine deiminase compare
PP_0595 -5.1 -11.3 Transcriptional regulator, LysR family compare
PP_5096 -5.0 -6.0 putative factor involved in shape determination compare
PP_0597 -4.8 -14.3 methylmalonate-semialdehyde dehydrogenase compare
PP_1842 -4.2 -6.4 Glutamine amidotransferase, class I compare
PP_5184 -4.2 -7.6 glutamylpolyamine synthetase compare
PP_5262 -3.8 -14.1 Probable multidrug resistance protein NorM compare
PP_5055 -3.5 -5.4 Sulfurtransferase compare
PP_1758 -3.0 -8.5 putative sulfurtransferase containing rhodanese-like domain compare
PP_1017 -2.8 -6.6 mannose/glucose ABC transporter, permease protein compare
PP_1016 -2.6 -8.2 mannose/glucose ABC transporter, permease protein compare
PP_1018 -2.5 -6.5 mannose/glucose ABC transporter - ATP binding subunit compare
PP_5212 -2.5 -6.6 Oxidoreductase, iron-sulfur-binding compare
PP_2181 -2.5 -5.3 Transcriptional regulator, Cro/CI family compare
PP_0697 -2.3 -8.2 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_1015 -2.3 -9.4 mannose/glucose ABC transporter, glucose-binding periplasmic protein compare
PP_0247 -2.2 -8.1 Osmolarity sensor protein EnvZ compare
PP_3731 -2.1 -5.8 Transcriptional regulator, TetR family compare
PP_5719 -2.0 -5.2 choline-responsive transcriptional repressor BetI compare
PP_3598 -1.8 -9.0 gamma-glutamyl-gamma-aminobutyrate hydrolase (EC: 3.5.1.94) (from data) compare
PP_1013 -1.8 -5.2 Sensor histidine kinase compare
PP_1346 -1.7 -5.2 Glutamate N-acetyltransferase/Amino-acid acetyltransferase compare
PP_0066 -1.6 -5.3 Ribosomal RNA small subunit methyltransferase B compare
PP_3990 -1.5 -6.9 substrate or modulator of FtsH-mediated proteolysis compare
PP_4947 -1.4 -9.4 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase compare
PP_4774 -1.3 -5.1 divalent cation efflux transporter compare
PP_1641 -1.3 -6.6 tRNA 2-thiocytidine biosynthesis protein TtcA compare
PP_4900 -1.2 -5.3 epoxyqueuosine reductase compare
PP_0795 -1.2 -5.2 fructose PTS permease - IIBC component compare
PP_4487 -1.2 -9.6 acetyl-CoA synthetase compare
PP_5273 +1.0 7.3 putative Oxidoreductase compare
PP_5268 +1.3 8.4 DNA-binding transcriptional repressor PuuR-putrescine compare
PP_2448 +1.3 9.8 Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) compare
PP_2543 +1.4 11.1 gamma-aminobutyrate permease compare
PP_3957 +1.6 13.8 choline/carnitine/betaine transporter BetTC compare
PP_4479 +1.8 10.3 arginine N-succinyltransferase, subunit beta compare
PP_2884 +3.2 24.2 XRE family transcriptional regulator compare
PP_3415 +3.7 28.4 Transcriptional regulator, LacI family compare


Specific phenotypes for nitrogen source Propandiamine across organisms