Experiment set29IT004 for Pseudomonas putida KT2440

Compare to:

Propandiamine nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_0596 -5.8 -9.6 Omega-amino acid--pyruvate aminotransferase compare
PP_4548 -5.7 -10.3 putative Oxidoreductase compare
PP_2181 -5.5 -5.1 Transcriptional regulator, Cro/CI family compare
PP_2932 -5.5 -10.5 Amidase family protein compare
PP_0567 -5.3 -11.4 Biosynthetic arginine decarboxylase compare
PP_4547 -5.3 -7.3 putative Glutamine synthetase compare
PP_0597 -5.3 -13.2 methylmalonate-semialdehyde dehydrogenase compare
PP_0595 -5.1 -11.9 Transcriptional regulator, LysR family compare
PP_0266 -5.1 -11.8 Agmatine deiminase compare
PP_5262 -5.0 -12.5 Probable multidrug resistance protein NorM compare
PP_0213 -5.0 -7.6 succinate-semialdehyde dehydrogenase (NADP+) compare
PP_5212 -4.9 -9.4 Oxidoreductase, iron-sulfur-binding compare
PP_5184 -4.7 -6.1 glutamylpolyamine synthetase compare
PP_5719 -4.6 -6.3 choline-responsive transcriptional repressor BetI compare
PP_1015 -4.5 -9.6 mannose/glucose ABC transporter, glucose-binding periplasmic protein compare
PP_5096 -4.2 -7.7 putative factor involved in shape determination compare
PP_1017 -3.9 -8.0 mannose/glucose ABC transporter, permease protein compare
PP_1016 -3.7 -10.6 mannose/glucose ABC transporter, permease protein compare
PP_0697 -3.6 -7.5 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_1013 -3.6 -7.6 Sensor histidine kinase compare
PP_5278 -3.5 -5.8 4-guanidinobutyraldehyde dehydrogenase compare
PP_1758 -2.9 -6.7 putative sulfurtransferase containing rhodanese-like domain compare
PP_1440 -2.8 -5.3 tRNA (mo5U34)-methyltransferase compare
PP_1917 -2.6 -8.1 4-amino-4-deoxychorismate lyase compare
PP_0247 -2.4 -7.9 Osmolarity sensor protein EnvZ compare
PP_5271 -2.3 -5.7 DNA-binding transcriptional dual regulator, leucine-binding compare
PP_4947 -2.2 -10.2 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase compare
PP_4487 -2.2 -12.7 acetyl-CoA synthetase compare
PP_0795 -1.7 -6.7 fructose PTS permease - IIBC component compare
PP_5180 -1.6 -7.9 spermidine/putrescine ABC transporter - periplasmic subunit compare
PP_3598 -1.6 -6.5 gamma-glutamyl-gamma-aminobutyrate hydrolase (EC: 3.5.1.94) (from data) compare
PP_4304 -1.5 -6.4 Cation transporter, VIC family compare
PP_3990 -1.5 -6.2 substrate or modulator of FtsH-mediated proteolysis compare
PP_2893 -1.4 -6.1 conserved exported protein of unknown function compare
PP_1641 -1.4 -5.3 tRNA 2-thiocytidine biosynthesis protein TtcA compare
PP_1234 -1.3 -5.8 putative permease compare
PP_1844 -1.3 -5.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PP_2223 -1.2 -5.3 conserved protein of unknown function compare
PP_2892 -1.2 -5.8 conserved exported protein of unknown function compare
PP_2657 -1.1 -5.2 phosphate ABC transporter compare
PP_5273 +1.1 6.8 putative Oxidoreductase compare
PP_2448 +1.1 6.3 Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) compare
PP_4654 +1.2 5.4 tRNA/tmRNA (uracil-C(5))-methyltransferase compare
PP_4184 +1.2 6.9 branched chain amino acid transporter compare
PP_0384 +1.2 5.3 Transcriptional regulator, AsnC family compare
PP_0412 +1.3 5.4 Polyamine ABC transporter, periplasmic polyamine-binding protein compare
PP_0282 +1.5 6.2 L-arginine ABC transporter - periplasmic binding subunit compare
PP_5236 +1.6 10.5 conserved protein of unknown function compare
PP_2543 +1.6 10.1 gamma-aminobutyrate permease compare
PP_5268 +2.1 12.3 DNA-binding transcriptional repressor PuuR-putrescine compare
PP_1185 +2.4 12.6 Outer membrane protein H1 compare
PP_3957 +2.5 20.4 choline/carnitine/betaine transporter BetTC compare
PP_4479 +2.7 17.7 arginine N-succinyltransferase, subunit beta compare
PP_2884 +3.4 24.0 XRE family transcriptional regulator compare
PP_3415 +5.1 30.6 Transcriptional regulator, LacI family compare


Specific phenotypes for nitrogen source Propandiamine across organisms