| | gene | name | fitness | t score | description | |
|---|
| b1361 | ydaW | -3.1 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2330 | yfcB | -2.6 | -3.0 | putative adenine-specific methylase (VIMSS) | compare |
| b3979 | thrT | -2.2 | -0.9 | tRNA-Thr (NCBI) | compare |
| b4042 | dgkA | -2.1 | -3.5 | diacylglycerol kinase (NCBI) | compare |
| b2528 | iscA | -1.9 | -2.3 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3390 | aroK | -1.9 | -3.1 | shikimate kinase I (NCBI) | compare |
| b3816 | corA | -1.8 | -10.1 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b3290 | trkA | -1.7 | -2.9 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3636 | rpmG | -1.7 | -3.3 | 50S ribosomal protein L33 (NCBI) | compare |
| b2567 | rnc | -1.7 | -1.5 | ribonuclease III (NCBI) | compare |
| b3870 | glnA | -1.6 | -4.0 | glutamine synthetase (NCBI) | compare |
| b2846 | yqeH | -1.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4701 | sokX | -1.6 | -1.3 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2279 | nuoK | -1.6 | -1.7 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3863 | polA | -1.6 | -1.5 | DNA polymerase I (NCBI) | compare |
| b3706 | trmE | -1.5 | -5.7 | tRNA modification GTPase (NCBI) | compare |
| b4171 | miaA | -1.5 | -4.1 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b4603 | rseX | -1.5 | -1.2 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1861 | ruvA | -1.5 | -2.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2282 | nuoH | -1.3 | -4.3 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0740 | tolB | -1.3 | -5.4 | translocation protein TolB precursor (NCBI) | compare |
| b2934 | cmtB | -1.2 | -0.8 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0737 | tolQ | -1.2 | -3.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0683 | fur | -1.2 | -1.9 | ferric uptake regulator (NCBI) | compare |
| b1351 | racC | -1.2 | -0.8 | Rac prophage; predicted protein (NCBI) | compare |
| b3613 | yibP | -1.2 | -4.8 | putative membrane protein (VIMSS) | compare |
| b2498 | upp | -1.2 | -3.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3026 | qseC | -1.2 | -4.5 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0990 | cspG | -1.2 | -1.4 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1860 | ruvB | -1.2 | -1.0 | Holliday junction DNA helicase B (NCBI) | compare |
| b2699 | recA | -1.1 | -1.3 | recombinase A (NCBI) | compare |
| b2912 | ygfA | -1.1 | -3.2 | putative ligase (VIMSS) | compare |
| b3839 | tatC | -1.1 | -6.6 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3741 | gidA | -1.0 | -4.4 | glucose-inhibited division protein A (NCBI) | compare |
| b1236 | galU | -1.0 | -4.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0222 | lpcA | -1.0 | -2.5 | phosphoheptose isomerase (NCBI) | compare |
| b4177 | purA | -1.0 | -1.1 | adenylosuccinate synthetase (NCBI) | compare |
| b0890 | ftsK | -1.0 | -4.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2277 | nuoM | -1.0 | -5.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2620 | smpB | -1.0 | -1.6 | SsrA-binding protein (NCBI) | compare |
| b3629 | rfaS | -1.0 | -3.6 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4676 | yoaK | -1.0 | -0.7 | expressed protein (RefSeq) | compare |
| b1847 | yebF | -1.0 | -1.5 | predicted protein (RefSeq) | compare |
| b3162 | deaD | -1.0 | -4.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3728 | pstS | -1.0 | -3.0 | phosphate transporter subunit (NCBI) | compare |
| b1165 | ymgA | -0.9 | -0.8 | hypothetical protein (NCBI) | compare |
| b2820 | recB | -0.9 | -1.2 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1409 | ynbB | -0.9 | -1.2 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b2935 | tktA | -0.9 | -1.7 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1257 | yciE | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b1363 | trkG | -0.9 | -0.6 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b0739 | tolA | -0.9 | -3.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3035 | tolC | -0.9 | -6.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b4647 | mokA | -0.9 | -0.8 | no description | compare |
| b3790 | rffC | -0.9 | -5.2 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b4179 | vacB | -0.9 | -5.2 | putative enzyme (VIMSS) | compare |
| b1182 | hlyE | -0.9 | -0.5 | hemolysin E (VIMSS) | compare |
| b4128 | yjdK | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b3052 | rfaE | -0.9 | -4.2 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0888 | trxB | -0.9 | -3.0 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2808 | gcvA | -0.9 | -4.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1576 | ydfD | -0.9 | -0.5 | Qin prophage; predicted protein (NCBI) | compare |
| b1765 | ydjA | -0.8 | -0.9 | predicted oxidoreductase (NCBI) | compare |
| b1499 | ydeO | -0.8 | -0.5 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b0677 | nagA | -0.8 | -4.5 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3183 | obgE | -0.8 | -1.3 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2297 | pta | -0.8 | -0.5 | phosphate acetyltransferase (NCBI) | compare |
| b1730 | ydjO | -0.8 | -1.2 | predicted protein (RefSeq) | compare |
| b0049 | apaH | -0.8 | -2.3 | diadenosinetetraphosphatase (NCBI) | compare |
| b2431 | b2431 | -0.8 | -4.9 | orf, hypothetical protein (VIMSS) | compare |
| b1290 | sapF | -0.8 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0630 | lipB | -0.8 | -1.2 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0161 | degP | -0.8 | -4.8 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b1497 | b1497 | -0.8 | -0.5 | putative enzyme (VIMSS) | compare |
| b2340 | sixA | -0.8 | -3.2 | phosphohistidine phosphatase (NCBI) | compare |
| b1726 | yniB | -0.8 | -2.3 | predicted inner membrane protein (NCBI) | compare |
| b0658 | ybeX | -0.8 | -0.7 | predicteed ion transport (NCBI) | compare |
| b2576 | srmB | -0.8 | -2.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b3621 | rfaC | -0.8 | -4.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0738 | tolR | -0.8 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1129 | phoQ | -0.8 | -1.6 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b2283 | nuoG | -0.8 | -4.3 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2504 | yfgG | -0.8 | -1.3 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b1192 | ldcA | -0.8 | -3.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b3792 | wzxE | -0.7 | -5.0 | O-antigen translocase (NCBI) | compare |
| b1130 | phoP | -0.7 | -0.9 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2278 | nuoL | -0.7 | -5.0 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4685 | yrbN | -0.7 | -2.2 | expressed protein (RefSeq) | compare |
| b3229 | sspA | -0.7 | -2.6 | stringent starvation protein A (NCBI) | compare |
| b1612 | fumA | -0.7 | -2.9 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b4163 | glyV | -0.7 | -1.3 | tRNA-Gly (NCBI) | compare |
| b1551 | b1551 | -0.7 | -0.4 | orf, hypothetical protein (VIMSS) | compare |
| b3181 | greA | -0.7 | -4.2 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1258 | yciF | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b4453 | ldrD | -0.7 | -1.1 | toxic polypeptide, small (NCBI) | compare |
| b4146 | yjeK | -0.7 | -1.8 | predicted lysine aminomutase (NCBI) | compare |
| b3778 | rep | -0.7 | -4.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3642 | pyrE | -0.7 | -3.1 | orotate phosphoribosyltransferase (NCBI) | compare |
| b1121 | ycfZ | -0.7 | -1.5 | predicted inner membrane protein (NCBI) | compare |
| b1536 | ydeI | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b2911 | ssrS | -0.7 | -1.7 | 6S regulatory RNA (NCBI) | compare |
| b0200 | gmhB | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b1307 | pspD | -0.7 | -1.7 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b1001 | yccE | -0.7 | -0.4 | hypothetical protein (NCBI) | compare |
| b2280 | nuoJ | -0.7 | -3.7 | NADH dehydrogenase subunit J (NCBI) | compare |
| b1347 | ydaC | -0.7 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1545 | pinQ | -0.7 | -0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b2822 | recC | -0.7 | -3.6 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4481 | rffT | -0.7 | -4.6 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3726 | pstA | -0.7 | -3.6 | phosphate transporter subunit (NCBI) | compare |
| b3962 | udhA | -0.7 | -3.8 | putative oxidoreductase (VIMSS) | compare |
| b1293 | sapB | -0.7 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3238 | yhcN | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0439 | lon | -0.7 | -3.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1658 | purR | -0.7 | -3.0 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b2569 | lepA | -0.7 | -3.0 | GTP-binding protein LepA (NCBI) | compare |
| b0928 | aspC | -0.7 | -3.9 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b0706 | ybfD | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b1040 | csgD | -0.7 | -1.2 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b4596 | yciZ | -0.6 | -1.1 | hypothetical protein (RefSeq) | compare |
| b2501 | ppk | -0.6 | -4.4 | polyphosphate kinase (NCBI) | compare |
| b2564 | pdxJ | -0.6 | -2.5 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b2352 | yfdI | -0.6 | -0.7 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b0014 | dnaK | -0.6 | -1.6 | molecular chaperone DnaK (NCBI) | compare |
| b0142 | folK | -0.6 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1642 | slyA | -0.6 | -1.7 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1334 | fnr | -0.6 | -1.8 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2284 | nuoF | -0.6 | -3.1 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0722 | sdhD | -0.6 | -3.2 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b4497 | yeeL | -0.6 | -0.8 | no description | compare |
| b0724 | sdhB | -0.6 | -4.3 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2175 | spr | -0.6 | -2.7 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3631 | rfaG | -0.6 | -5.3 | glucosyltransferase I (NCBI) | compare |
| b0114 | aceE | -0.6 | -0.8 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b4178 | yjeB | -0.6 | -3.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1762 | b1762 | -0.6 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b4375 | prfC | -0.6 | -2.6 | peptide chain release factor 3 (NCBI) | compare |
| b0471 | ybaB | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | -0.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3791 | rffA | -0.6 | -4.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1175 | minD | -0.6 | -3.5 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0506 | allR | -0.6 | -3.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1853 | yebK | -0.6 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0145 | dksA | -0.6 | -2.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3842 | rfaH | -0.6 | -3.4 | transcriptional activator RfaH (NCBI) | compare |
| b1159 | mcrA | -0.6 | -0.9 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b2066 | udk | -0.6 | -2.4 | uridine/cytidine kinase (VIMSS) | compare |
| b1627 | rsxA | -0.6 | -1.9 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b3169 | nusA | -0.6 | -1.9 | transcription elongation factor NusA (NCBI) | compare |
| b2286 | nuoC | -0.6 | -2.9 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0912 | ihfB | -0.6 | -2.6 | integration host factor subunit beta (NCBI) | compare |
| b1882 | cheY | -0.6 | -0.4 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1656 | sodB | -0.6 | -2.1 | superoxide dismutase, Fe (NCBI) | compare |
| b4203 | rplI | -0.6 | -2.9 | 50S ribosomal protein L9 (NCBI) | compare |
| b1691 | ydiN | -0.6 | -2.5 | predicted transporter (RefSeq) | compare |
| b3844 | fre | -0.6 | -3.2 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3786 | rffE | -0.6 | -4.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1865 | nudB | -0.6 | -1.1 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2136 | yohD | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4413 | sokC | -0.6 | -1.0 | regulatory antisense RNA (NCBI) | compare |
| b3119 | tdcR | -0.6 | -1.8 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b1167 | ymgC | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b4414 | tff | -0.6 | -2.5 | unknown RNA (NCBI) | compare |
| b3916 | pfkA | -0.6 | -1.7 | 6-phosphofructokinase (NCBI) | compare |
| b2285 | nuoE | -0.6 | -1.2 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2055 | wcaE | -0.6 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b0685 | ybfE | -0.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0705 | ybfL | -0.6 | -0.4 | putative receptor protein (VIMSS) | compare |
| b0053 | surA | -0.6 | -3.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1105 | ycfM | -0.6 | -2.3 | predicted outer membrane lipoprotein (NCBI) | compare |
| b3784 | rfe | -0.6 | -4.5 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1920 | fliY | -0.6 | -1.8 | cystine transporter subunit (NCBI) | compare |
| b0437 | clpP | -0.6 | -2.8 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2553 | glnB | -0.5 | -2.6 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b2276 | nuoN | -0.5 | -2.9 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3781 | trxA | -0.5 | -2.3 | thioredoxin 1 (VIMSS) | compare |
| b1286 | rnb | -0.5 | -1.5 | exoribonuclease II (NCBI) | compare |
| b3871 | bipA | -0.5 | -4.4 | GTP-binding protein (NCBI) | compare |
| b0249 | ykfF | -0.5 | -0.8 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0605 | ahpC | -0.5 | -2.4 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b4312 | fimB | -0.5 | -4.2 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1712 | ihfA | -0.5 | -1.2 | integration host factor subunit alpha (NCBI) | compare |
| b0082 | mraW | -0.5 | -1.6 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2189 | proL | -0.5 | -1.2 | tRNA-Pro (NCBI) | compare |
| b0676 | nagC | -0.5 | -3.6 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b2110 | yehC | -0.5 | -0.8 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0059 | hepA | -0.5 | -4.6 | ATP-dependent helicase HepA (NCBI) | compare |
| b3977 | tyrU | -0.5 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b0862 | artQ | -0.5 | -2.0 | arginine transporter subunit (NCBI) | compare |
| b3940 | metL | -0.5 | -3.9 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b2320 | pdxB | -0.5 | -3.2 | erythronate-4-phosphate dehydrogenase (NCBI) | compare |
| b3389 | aroB | -0.5 | -4.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b1180 | ycgM | -0.5 | -1.7 | predicted isomerase/hydrolase (NCBI) | compare |
| b1161 | ycgX | -0.5 | -0.8 | hypothetical protein (NCBI) | compare |
| b4006 | purH | -0.5 | -4.1 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b0523 | purE | -0.5 | -2.2 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b1279 | yciS | -0.5 | -0.8 | conserved inner membrane protein (NCBI) | compare |
| b4201 | priB | -0.5 | -1.6 | primosomal replication protein N (NCBI) | compare |
| b1690 | ydiM | -0.5 | -1.4 | predicted transporter (NCBI) | compare |
| b3236 | mdh | -0.5 | -3.3 | malate dehydrogenase (NCBI) | compare |